RNA–Protein interactions for RNA: ENST00000409454.5

HMGN2P46-204, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 46, humanhuman

TSL 2 BASIC

Gene HMGN2P46, Length 1,923 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P46-204ENST00000409454 RPS6KB1P23443 525 aa8.18□□□□□ -1.1
HMGN2P46-204ENST00000409454 MSNP26038 577 aaKnown RBP8.18□□□□□ -1.1
HMGN2P46-204ENST00000409454 MCMDC2Q4G0Z9 681 aa8.18□□□□□ -1.1
HMGN2P46-204ENST00000409454 EPHA10Q5JZY3 1008 aa8.18□□□□□ -1.1
HMGN2P46-204ENST00000409454 CCDC83Q8IWF9 413 aa8.18□□□□□ -1.1
HMGN2P46-204ENST00000409454 DDX54Q8TDD1 881 aaKnown RBP8.18□□□□□ -1.1
HMGN2P46-204ENST00000409454 DBNLQ9UJU6 430 aaKnown RBP8.18□□□□□ -1.1
HMGN2P46-204ENST00000409454 AKAP2Q9Y2D5 859 aa8.18□□□□□ -1.1
HMGN2P46-204ENST00000409454 AFDNP55196 1824 aaKnown RBP8.18□□□□□ -1.1
HMGN2P46-204ENST00000409454 KCNQ2O43526 872 aa8.17□□□□□ -1.1
HMGN2P46-204ENST00000409454 PIP4K2AP48426 406 aaPredicted RBP8.17□□□□□ -1.1
HMGN2P46-204ENST00000409454 FGD1P98174 961 aa8.17□□□□□ -1.1
HMGN2P46-204ENST00000409454 CCDC57Q2TAC2 916 aa8.17□□□□□ -1.1
HMGN2P46-204ENST00000409454 HSP90AB3PQ58FF7 597 aa8.17□□□□□ -1.1
HMGN2P46-204ENST00000409454 CCDC183Q5T5S1 534 aa8.17□□□□□ -1.1
HMGN2P46-204ENST00000409454 KBTBD3Q8NAB2 608 aa8.17□□□□□ -1.1
HMGN2P46-204ENST00000409454 NEUROD6Q96NK8 337 aa8.17□□□□□ -1.1
HMGN2P46-204ENST00000409454 TSPY26PQ9H489 355 aa8.17□□□□□ -1.1
HMGN2P46-204ENST00000409454 STRN4Q9NRL3 753 aa8.17□□□□□ -1.1
HMGN2P46-204ENST00000409454 HELLSQ9NRZ9 838 aa8.17□□□□□ -1.1
HMGN2P46-204ENST00000409454 BTG4Q9NY30 223 aa8.17□□□□□ -1.1
HMGN2P46-204ENST00000409454 TNS2Q63HR2 1409 aa8.17□□□□□ -1.1
HMGN2P46-204ENST00000409454 SPATA31A5Q5VU36 1347 aa8.17□□□□□ -1.1
HMGN2P46-204ENST00000409454 SPATA31A7Q8IWB4 1347 aa8.17□□□□□ -1.1
HMGN2P46-204ENST00000409454 SH3TC1Q8TE82 1336 aa8.17□□□□□ -1.1
HMGN2P46-204ENST00000409454 COL14A1Q05707 1796 aaKnown RBP8.17□□□□□ -1.1
HMGN2P46-204ENST00000409454 PALLDQ8WX93 1383 aa8.17□□□□□ -1.1
HMGN2P46-204ENST00000409454 KCPQ6ZWJ8 1503 aa8.17□□□□□ -1.1
HMGN2P46-204ENST00000409454 TAF5LO75529 589 aa8.17□□□□□ -1.1
HMGN2P46-204ENST00000409454 APBA3O96018 575 aa8.17□□□□□ -1.1
HMGN2P46-204ENST00000409454 PRIM1P49642 420 aaKnown RBP8.17□□□□□ -1.1
HMGN2P46-204ENST00000409454 CASP7P55210 303 aa8.17□□□□□ -1.1
HMGN2P46-204ENST00000409454 ADCK5Q3MIX3 580 aa8.17□□□□□ -1.1
HMGN2P46-204ENST00000409454 TAF7LQ5H9L4 462 aa8.17□□□□□ -1.1
HMGN2P46-204ENST00000409454 CCDC158Q5M9N0 1113 aa8.17□□□□□ -1.1
HMGN2P46-204ENST00000409454 USPL1Q5W0Q7 1092 aa8.17□□□□□ -1.1
HMGN2P46-204ENST00000409454 LARP1BQ659C4 914 aaKnown RBP8.17□□□□□ -1.1
HMGN2P46-204ENST00000409454 USP48Q86UV5 1035 aa8.17□□□□□ -1.1
HMGN2P46-204ENST00000409454 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.17□□□□□ -1.1
HMGN2P46-204ENST00000409454 TMEM63CQ9P1W3 806 aa8.17□□□□□ -1.1
HMGN2P46-204ENST00000409454 PAPPAQ13219 1627 aa8.16□□□□□ -1.1
HMGN2P46-204ENST00000409454 UBR2Q8IWV8 1755 aa8.16□□□□□ -1.1
HMGN2P46-204ENST00000409454 TNS1Q9HBL0 1735 aaKnown RBP8.16□□□□□ -1.1
HMGN2P46-204ENST00000409454 VPS37CA5D8V6 355 aaPredicted RBP8.16□□□□□ -1.1
HMGN2P46-204ENST00000409454 NBPF26B4DH59 902 aa8.16□□□□□ -1.1
HMGN2P46-204ENST00000409454 EYA2O00167 538 aa8.16□□□□□ -1.1
HMGN2P46-204ENST00000409454 KRT85P78386 507 aa8.16□□□□□ -1.1
HMGN2P46-204ENST00000409454 FOXO4P98177 505 aa8.16□□□□□ -1.1
HMGN2P46-204ENST00000409454 GORABQ5T7V8 394 aa8.16□□□□□ -1.1
HMGN2P46-204ENST00000409454 NBPF10Q6P3W6 841 aaKnown RBP8.16□□□□□ -1.1
HMGN2P46-204ENST00000409454 NBPF15Q8N660 670 aa8.16□□□□□ -1.1
HMGN2P46-204ENST00000409454 NEK1Q96PY6 1258 aa8.16□□□□□ -1.1
HMGN2P46-204ENST00000409454 DBNDD2Q9BQY9 259 aa8.16□□□□□ -1.1
HMGN2P46-204ENST00000409454 ZBTB3Q9H5J0 574 aa8.16□□□□□ -1.1
HMGN2P46-204ENST00000409454 PAG1Q9NWQ8 432 aa8.16□□□□□ -1.1
HMGN2P46-204ENST00000409454 CEP126Q9P2H0 1117 aa8.16□□□□□ -1.1
HMGN2P46-204ENST00000409454 NRAPQ86VF7 1730 aa8.16□□□□□ -1.1
HMGN2P46-204ENST00000409454 ZFYP08048 801 aaPredicted RBP8.15□□□□□ -1.1
HMGN2P46-204ENST00000409454 IFIT1P09914 478 aaKnown RBP8.15□□□□□ -1.1
HMGN2P46-204ENST00000409454 HSP90B1P14625 803 aaKnown RBP8.15□□□□□ -1.1
HMGN2P46-204ENST00000409454 TRIM28Q13263 835 aaKnown RBP8.15□□□□□ -1.1
HMGN2P46-204ENST00000409454 ME3Q16798 604 aa8.15□□□□□ -1.1
HMGN2P46-204ENST00000409454 TTLL7Q6ZT98 887 aa8.15□□□□□ -1.1
HMGN2P46-204ENST00000409454 ZSCAN30Q86W11 494 aa8.15□□□□□ -1.1
HMGN2P46-204ENST00000409454 DSCC1Q9BVC3 393 aa8.15□□□□□ -1.1
HMGN2P46-204ENST00000409454 SCAND2PQ9GZW5 306 aaPredicted RBP8.15□□□□□ -1.1
HMGN2P46-204ENST00000409454 RBM27Q9P2N5 1060 aaKnown RBP8.15□□□□□ -1.1
HMGN2P46-204ENST00000409454 ABCC12Q96J65 1359 aa8.15□□□□□ -1.1
HMGN2P46-204ENST00000409454 THSD7AQ9UPZ6 1657 aa8.15□□□□□ -1.11
HMGN2P46-204ENST00000409454 GOLGA6L4A6NEF3 574 aa8.15□□□□□ -1.11
HMGN2P46-204ENST00000409454 TRIM37O94972 964 aa8.15□□□□□ -1.11
HMGN2P46-204ENST00000409454 A1BGP04217 495 aa8.15□□□□□ -1.11
HMGN2P46-204ENST00000409454 CPA1P15085 419 aa8.15□□□□□ -1.11
HMGN2P46-204ENST00000409454 TCIRG1Q13488 830 aa8.15□□□□□ -1.11
HMGN2P46-204ENST00000409454 UVSSAQ2YD98 709 aa8.15□□□□□ -1.11
HMGN2P46-204ENST00000409454 FOXD4L6Q3SYB3 417 aaPredicted RBP8.15□□□□□ -1.11
HMGN2P46-204ENST00000409454 FOXD4L3Q6VB84 417 aaPredicted RBP8.15□□□□□ -1.11
HMGN2P46-204ENST00000409454 RRAGDQ9NQL2 400 aaPredicted RBP8.15□□□□□ -1.11
HMGN2P46-204ENST00000409454 TPCN1Q9ULQ1 816 aa8.15□□□□□ -1.11
HMGN2P46-204ENST00000409454 ZNF609O15014 1411 aa8.14□□□□□ -1.11
HMGN2P46-204ENST00000409454 ABCA3Q99758 1704 aa8.14□□□□□ -1.11
HMGN2P46-204ENST00000409454 GOLIM4O00461 696 aa8.14□□□□□ -1.11
HMGN2P46-204ENST00000409454 FIBPO43427 364 aa8.14□□□□□ -1.11
HMGN2P46-204ENST00000409454 PCCAP05165 728 aaPredicted RBP8.14□□□□□ -1.11
HMGN2P46-204ENST00000409454 MCM5P33992 734 aa8.14□□□□□ -1.11
HMGN2P46-204ENST00000409454 IFIT5Q13325 482 aaKnown RBP8.14□□□□□ -1.11
HMGN2P46-204ENST00000409454 TTC39AQ5SRH9 613 aa8.14□□□□□ -1.11
HMGN2P46-204ENST00000409454 DDX46Q7L014 1031 aaKnown RBP8.14□□□□□ -1.11
HMGN2P46-204ENST00000409454 ZNF589Q86UQ0 364 aaPredicted RBP8.14□□□□□ -1.11
HMGN2P46-204ENST00000409454 JARID2Q92833 1246 aaPredicted RBP8.14□□□□□ -1.11
HMGN2P46-204ENST00000409454 ISCA1Q9BUE6 129 aa8.14□□□□□ -1.11
HMGN2P46-204ENST00000409454 RBSNQ9H1K0 784 aa8.14□□□□□ -1.11
HMGN2P46-204ENST00000409454 CCDC39Q9UFE4 941 aa8.14□□□□□ -1.11
HMGN2P46-204ENST00000409454 CTNNA3Q9UI47 895 aa8.14□□□□□ -1.11
HMGN2P46-204ENST00000409454 MTMR6Q9Y217 621 aa8.14□□□□□ -1.11
HMGN2P46-204ENST00000409454 CNPY2Q9Y2B0 182 aa8.14□□□□□ -1.11
HMGN2P46-204ENST00000409454 ZNF330Q9Y3S2 320 aaPredicted RBP8.14□□□□□ -1.11
HMGN2P46-204ENST00000409454 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.14□□□□□ -1.11
HMGN2P46-204ENST00000409454 ELP1O95163 1332 aa8.14□□□□□ -1.11
HMGN2P46-204ENST00000409454 NUP188Q5SRE5 1749 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms