RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 ABCA8O94911 1581 aa5.8□□□□□ -1.48
SCN3A-203ENST00000409101 USP48Q86UV5 1035 aa5.8□□□□□ -1.48
SCN3A-203ENST00000409101 CERS3Q8IU89 383 aa5.8□□□□□ -1.48
SCN3A-203ENST00000409101 SULF1Q8IWU6 871 aa5.8□□□□□ -1.48
SCN3A-203ENST00000409101 ARHGAP45Q92619 1136 aa5.8□□□□□ -1.48
SCN3A-203ENST00000409101 METTL22Q9BUU2 404 aaPredicted RBP5.8□□□□□ -1.48
SCN3A-203ENST00000409101 SLC26A6Q9BXS9 759 aa5.8□□□□□ -1.48
SCN3A-203ENST00000409101 TRIM5Q9C035 493 aa5.8□□□□□ -1.48
SCN3A-203ENST00000409101 SPDYE3A6NKU9 549 aa5.8□□□□□ -1.48
SCN3A-203ENST00000409101 RNF113AO15541 343 aaKnown RBP5.8□□□□□ -1.48
SCN3A-203ENST00000409101 MCM5P33992 734 aa5.8□□□□□ -1.48
SCN3A-203ENST00000409101 HMGN5P82970 282 aaKnown RBP5.8□□□□□ -1.48
SCN3A-203ENST00000409101 TFCP2Q12800 502 aa5.8□□□□□ -1.48
SCN3A-203ENST00000409101 APBB1IPQ7Z5R6 666 aaPredicted RBP5.8□□□□□ -1.48
SCN3A-203ENST00000409101 MRPL50Q8N5N7 158 aaKnown RBP5.8□□□□□ -1.48
SCN3A-203ENST00000409101 WDR66Q8TBY9 1149 aa5.8□□□□□ -1.48
SCN3A-203ENST00000409101 LPXNO60711 386 aa5.8□□□□□ -1.48
SCN3A-203ENST00000409101 IRX3P78415 501 aaPredicted RBP5.8□□□□□ -1.48
SCN3A-203ENST00000409101 C8orf58Q8NAV2 365 aa5.8□□□□□ -1.48
SCN3A-203ENST00000409101 GOPCQ9HD26 462 aa5.8□□□□□ -1.48
SCN3A-203ENST00000409101 USP16Q9Y5T5 823 aa5.8□□□□□ -1.48
SCN3A-203ENST00000409101 ADGRL2O95490 1459 aa5.8□□□□□ -1.48
SCN3A-203ENST00000409101 ZBED4O75132 1171 aa5.8□□□□□ -1.48
SCN3A-203ENST00000409101 CALM1P0DP23 149 aa5.8□□□□□ -1.48
SCN3A-203ENST00000409101 CALM2P0DP24 149 aa5.8□□□□□ -1.48
SCN3A-203ENST00000409101 CALM3P0DP25 149 aa5.8□□□□□ -1.48
SCN3A-203ENST00000409101 DEKP35659 375 aaKnown RBP5.8□□□□□ -1.48
SCN3A-203ENST00000409101 NAPAP54920 295 aa5.8□□□□□ -1.48
SCN3A-203ENST00000409101 RBM6P78332 1123 aaKnown RBP5.8□□□□□ -1.48
SCN3A-203ENST00000409101 CCT2P78371 535 aaKnown RBP5.8□□□□□ -1.48
SCN3A-203ENST00000409101 MICU3Q86XE3 530 aa5.8□□□□□ -1.48
SCN3A-203ENST00000409101 SMCR8Q8TEV9 937 aaPredicted RBP5.8□□□□□ -1.48
SCN3A-203ENST00000409101 A1BGP04217 495 aa5.79□□□□□ -1.48
SCN3A-203ENST00000409101 RFX1P22670 979 aa5.79□□□□□ -1.48
SCN3A-203ENST00000409101 EIF5P55010 431 aaKnown RBP5.79□□□□□ -1.48
SCN3A-203ENST00000409101 DALRD3Q5D0E6 543 aaKnown RBP5.79□□□□□ -1.48
SCN3A-203ENST00000409101 MNS1Q8NEH6 495 aa5.79□□□□□ -1.48
SCN3A-203ENST00000409101 ZNF397Q8NF99 534 aaPredicted RBP5.79□□□□□ -1.48
SCN3A-203ENST00000409101 ARHGEF5Q12774 1597 aa5.79□□□□□ -1.48
SCN3A-203ENST00000409101 ATP8B2P98198 1209 aa5.79□□□□□ -1.48
SCN3A-203ENST00000409101 CETN1Q12798 172 aa5.79□□□□□ -1.48
SCN3A-203ENST00000409101 MCMDC2Q4G0Z9 681 aa5.79□□□□□ -1.48
SCN3A-203ENST00000409101 FKBP15Q5T1M5 1219 aa5.79□□□□□ -1.48
SCN3A-203ENST00000409101 CCDC181Q5TID7 509 aa5.79□□□□□ -1.48
SCN3A-203ENST00000409101 NEK1Q96PY6 1258 aa5.79□□□□□ -1.48
SCN3A-203ENST00000409101 CARD10Q9BWT7 1032 aa5.79□□□□□ -1.48
SCN3A-203ENST00000409101 C6orf50Q9HD87 102 aa5.79□□□□□ -1.48
SCN3A-203ENST00000409101 SAMD9LQ8IVG5 1584 aa5.79□□□□□ -1.48
SCN3A-203ENST00000409101 BICC1Q9H694 974 aaKnown RBP5.79□□□□□ -1.48
SCN3A-203ENST00000409101 KIAA0232Q92628 1395 aa5.79□□□□□ -1.48
SCN3A-203ENST00000409101 PPEF1O14829 653 aaPredicted RBP5.79□□□□□ -1.48
SCN3A-203ENST00000409101 ERLIN2O94905 339 aa5.79□□□□□ -1.48
SCN3A-203ENST00000409101 CCDC192P0DO97 292 aa5.79□□□□□ -1.48
SCN3A-203ENST00000409101 CETN2P41208 172 aa5.79□□□□□ -1.48
SCN3A-203ENST00000409101 HSP90AA2PQ14568 343 aaPredicted RBP5.79□□□□□ -1.48
SCN3A-203ENST00000409101 MLH3Q9UHC1 1453 aa5.79□□□□□ -1.48
SCN3A-203ENST00000409101 PHKG2P15735 406 aa5.79□□□□□ -1.48
SCN3A-203ENST00000409101 CCDC184Q52MB2 194 aa5.79□□□□□ -1.48
SCN3A-203ENST00000409101 TBC1D22AQ8WUA7 517 aa5.79□□□□□ -1.48
SCN3A-203ENST00000409101 CCDC97Q96F63 343 aaPredicted RBP5.79□□□□□ -1.48
SCN3A-203ENST00000409101 PYM1Q9BRP8 204 aaKnown RBP5.79□□□□□ -1.48
SCN3A-203ENST00000409101 POLR3AO14802 1390 aaPredicted RBP5.79□□□□□ -1.48
SCN3A-203ENST00000409101 PLXNC1O60486 1568 aa5.78□□□□□ -1.48
SCN3A-203ENST00000409101 MROH5Q6ZUA9 1318 aa5.78□□□□□ -1.48
SCN3A-203ENST00000409101 ATP2B4P23634 1241 aa5.78□□□□□ -1.48
SCN3A-203ENST00000409101 GUCY1B3Q02153 619 aa5.78□□□□□ -1.48
SCN3A-203ENST00000409101 PABPC4Q13310 644 aaKnown RBP eCLIP5.78□□□□□ -1.48
SCN3A-203ENST00000409101 TAF12Q16514 161 aa5.78□□□□□ -1.48
SCN3A-203ENST00000409101 RTN1Q16799 776 aa5.78□□□□□ -1.48
SCN3A-203ENST00000409101 ABT1Q9ULW3 272 aaKnown RBP5.78□□□□□ -1.48
SCN3A-203ENST00000409101 PA2G4Q9UQ80 394 aaKnown RBP5.78□□□□□ -1.48
SCN3A-203ENST00000409101 ARHGEF12Q9NZN5 1544 aa5.78□□□□□ -1.48
SCN3A-203ENST00000409101 SMTNL1A8MU46 457 aa5.78□□□□□ -1.48
SCN3A-203ENST00000409101 PARP1P09874 1014 aaKnown RBP5.78□□□□□ -1.48
SCN3A-203ENST00000409101 JAKMIP3Q5VZ66 844 aa5.78□□□□□ -1.48
SCN3A-203ENST00000409101 USPL1Q5W0Q7 1092 aa5.78□□□□□ -1.48
SCN3A-203ENST00000409101 RSPH6AQ9H0K4 717 aa5.78□□□□□ -1.48
SCN3A-203ENST00000409101 LGR6Q9HBX8 967 aa5.78□□□□□ -1.48
SCN3A-203ENST00000409101 IL13P35225 146 aa5.78□□□□□ -1.48
SCN3A-203ENST00000409101 DCAF15Q66K64 600 aa5.78□□□□□ -1.48
SCN3A-203ENST00000409101 CCDC174Q6PII3 467 aa5.78□□□□□ -1.48
SCN3A-203ENST00000409101 RAB11FIP4Q86YS3 637 aa5.78□□□□□ -1.48
SCN3A-203ENST00000409101 ZNF710Q8N1W2 664 aa5.78□□□□□ -1.48
SCN3A-203ENST00000409101 ERVK-7P63135 1459 aa5.78□□□□□ -1.48
SCN3A-203ENST00000409101 VSIG10Q8N0Z9 540 aa5.78□□□□□ -1.48
SCN3A-203ENST00000409101 TNPO1Q92973 898 aaKnown RBP5.78□□□□□ -1.48
SCN3A-203ENST00000409101 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.78□□□□□ -1.48
SCN3A-203ENST00000409101 ADGBQ8N7X0 1667 aa5.78□□□□□ -1.48
SCN3A-203ENST00000409101 LOC102724428A0A0B4J2F2 783 aa5.78□□□□□ -1.48
SCN3A-203ENST00000409101 ZBTB43O43298 467 aa5.78□□□□□ -1.48
SCN3A-203ENST00000409101 SIK1P57059 783 aa5.78□□□□□ -1.48
SCN3A-203ENST00000409101 FAM182BQ5T319 152 aa5.78□□□□□ -1.48
SCN3A-203ENST00000409101 MEIS3Q99687 375 aa5.78□□□□□ -1.48
SCN3A-203ENST00000409101 ACBD3Q9H3P7 528 aa5.78□□□□□ -1.48
SCN3A-203ENST00000409101 SPC25Q9HBM1 224 aa5.78□□□□□ -1.48
SCN3A-203ENST00000409101 HOXB7P09629 217 aa5.77□□□□□ -1.48
SCN3A-203ENST00000409101 NBPF7P0C2Y1 421 aaPredicted RBP5.77□□□□□ -1.48
SCN3A-203ENST00000409101 CAVIN1Q6NZI2 390 aaKnown RBP5.77□□□□□ -1.48
SCN3A-203ENST00000409101 GADL1Q6ZQY3 521 aa5.77□□□□□ -1.48
SCN3A-203ENST00000409101 USP37Q86T82 979 aa5.77□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms