RNA–Protein interactions for RNA: ENST00000409093.1

LRRTM4-202, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

APPRIS P3 TSL 2 BASIC

Gene LRRTM4, Length 2,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-202ENST00000409093 PARP10Q53GL7 1025 aa12.02□□□□□ -0.48
LRRTM4-202ENST00000409093 PTF1AQ7RTS3 328 aa12.02□□□□□ -0.48
LRRTM4-202ENST00000409093 AKAP2Q9Y2D5 859 aa12.02□□□□□ -0.48
LRRTM4-202ENST00000409093 CCDC171Q6TFL3 1326 aa12.02□□□□□ -0.49
LRRTM4-202ENST00000409093 SH3TC1Q8TE82 1336 aa12.02□□□□□ -0.49
LRRTM4-202ENST00000409093 RFX7Q2KHR2 1363 aa12.02□□□□□ -0.49
LRRTM4-202ENST00000409093 KCNQ4P56696 695 aa12.02□□□□□ -0.49
LRRTM4-202ENST00000409093 PTH1RQ03431 593 aa12.02□□□□□ -0.49
LRRTM4-202ENST00000409093 FAM182BQ5T319 152 aa12.02□□□□□ -0.49
LRRTM4-202ENST00000409093 SUSD4Q5VX71 490 aa12.02□□□□□ -0.49
LRRTM4-202ENST00000409093 LDHAL6AQ6ZMR3 332 aa12.02□□□□□ -0.49
LRRTM4-202ENST00000409093 UTP14AQ9BVJ6 771 aaKnown RBP12.02□□□□□ -0.49
LRRTM4-202ENST00000409093 NIP7Q9Y221 180 aaKnown RBP eCLIP12.02□□□□□ -0.49
LRRTM4-202ENST00000409093 ZNF652Q9Y2D9 606 aa12.02□□□□□ -0.49
LRRTM4-202ENST00000409093 RIC1Q4ADV7 1423 aa12.01□□□□□ -0.49
LRRTM4-202ENST00000409093 DDX60Q8IY21 1712 aaKnown RBP12.01□□□□□ -0.49
LRRTM4-202ENST00000409093 LAMB2P55268 1798 aa12.01□□□□□ -0.49
LRRTM4-202ENST00000409093 MCM2P49736 904 aa12.01□□□□□ -0.49
LRRTM4-202ENST00000409093 DDX46Q7L014 1031 aaKnown RBP12.01□□□□□ -0.49
LRRTM4-202ENST00000409093 AK7Q96M32 723 aa12.01□□□□□ -0.49
LRRTM4-202ENST00000409093 UPF3BQ9BZI7 483 aaKnown RBP12.01□□□□□ -0.49
LRRTM4-202ENST00000409093 CNNM1Q9NRU3 951 aa12.01□□□□□ -0.49
LRRTM4-202ENST00000409093 SNX14Q9Y5W7 946 aa12.01□□□□□ -0.49
LRRTM4-202ENST00000409093 SBF2Q86WG5 1849 aa12.01□□□□□ -0.49
LRRTM4-202ENST00000409093 KCNJ4P48050 445 aa12.01□□□□□ -0.49
LRRTM4-202ENST00000409093 METTL24Q5JXM2 366 aa12.01□□□□□ -0.49
LRRTM4-202ENST00000409093 GORABQ5T7V8 394 aa12.01□□□□□ -0.49
LRRTM4-202ENST00000409093 CNTNAP4Q9C0A0 1308 aa12□□□□□ -0.49
LRRTM4-202ENST00000409093 MED23Q9ULK4 1368 aa12□□□□□ -0.49
LRRTM4-202ENST00000409093 SPEF2Q9C093 1822 aa12□□□□□ -0.49
LRRTM4-202ENST00000409093 GOLIM4O00461 696 aa12□□□□□ -0.49
LRRTM4-202ENST00000409093 HCLS1P14317 486 aaPredicted RBP12□□□□□ -0.49
LRRTM4-202ENST00000409093 PRDM10Q9NQV6 1147 aa12□□□□□ -0.49
LRRTM4-202ENST00000409093 SNRKQ9NRH2 765 aa12□□□□□ -0.49
LRRTM4-202ENST00000409093 PAG1Q9NWQ8 432 aa12□□□□□ -0.49
LRRTM4-202ENST00000409093 TRPC5Q9UL62 973 aaPredicted RBP12□□□□□ -0.49
LRRTM4-202ENST00000409093 ATRNO75882 1429 aa12□□□□□ -0.49
LRRTM4-202ENST00000409093 SCN7AQ01118 1682 aa12□□□□□ -0.49
LRRTM4-202ENST00000409093 IFIT1P09914 478 aaKnown RBP11.99□□□□□ -0.49
LRRTM4-202ENST00000409093 CCDC158Q5M9N0 1113 aa11.99□□□□□ -0.49
LRRTM4-202ENST00000409093 PRPF40BQ6NWY9 871 aaKnown RBP11.99□□□□□ -0.49
LRRTM4-202ENST00000409093 RASEFQ8IZ41 740 aa11.99□□□□□ -0.49
LRRTM4-202ENST00000409093 KBTBD3Q8NAB2 608 aa11.99□□□□□ -0.49
LRRTM4-202ENST00000409093 XAGE2Q96GT9 111 aa11.99□□□□□ -0.49
LRRTM4-202ENST00000409093 RIPOR2Q9Y4F9 1068 aa11.99□□□□□ -0.49
LRRTM4-202ENST00000409093 LRP5O75197 1615 aa11.99□□□□□ -0.49
LRRTM4-202ENST00000409093 ADORA1P30542 326 aa11.99□□□□□ -0.49
LRRTM4-202ENST00000409093 ATP2B3Q16720 1220 aa11.99□□□□□ -0.49
LRRTM4-202ENST00000409093 TTC39AQ5SRH9 613 aa11.99□□□□□ -0.49
LRRTM4-202ENST00000409093 NOL8Q76FK4 1167 aaKnown RBP11.99□□□□□ -0.49
LRRTM4-202ENST00000409093 RGS22Q8NE09 1264 aa11.99□□□□□ -0.49
LRRTM4-202ENST00000409093 RBM8AQ9Y5S9 174 aaKnown RBP11.99□□□□□ -0.49
LRRTM4-202ENST00000409093 LY75O60449 1722 aa11.98□□□□□ -0.49
LRRTM4-202ENST00000409093 NTSR2O95665 410 aa11.98□□□□□ -0.49
LRRTM4-202ENST00000409093 CLEC4GQ6UXB4 293 aa11.98□□□□□ -0.49
LRRTM4-202ENST00000409093 ZNF589Q86UQ0 364 aaPredicted RBP11.98□□□□□ -0.49
LRRTM4-202ENST00000409093 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.98□□□□□ -0.49
LRRTM4-202ENST00000409093 MAP4K1Q92918 833 aa11.98□□□□□ -0.49
LRRTM4-202ENST00000409093 TMX3Q96JJ7 454 aa11.98□□□□□ -0.49
LRRTM4-202ENST00000409093 CCNL1Q9UK58 526 aaPredicted RBP11.98□□□□□ -0.49
LRRTM4-202ENST00000409093 TAF1LQ8IZX4 1826 aa11.98□□□□□ -0.49
LRRTM4-202ENST00000409093 ZKSCAN1P17029 563 aaPredicted RBP11.98□□□□□ -0.49
LRRTM4-202ENST00000409093 RAB3GAP1Q15042 981 aa11.98□□□□□ -0.49
LRRTM4-202ENST00000409093 SEPT12Q8IYM1 358 aa11.98□□□□□ -0.49
LRRTM4-202ENST00000409093 NECTIN1Q15223 517 aa11.97□□□□□ -0.49
LRRTM4-202ENST00000409093 GNPATO15228 680 aa11.96□□□□□ -0.49
LRRTM4-202ENST00000409093 CASTP20810 708 aaKnown RBP11.96□□□□□ -0.49
LRRTM4-202ENST00000409093 FKBP4Q02790 459 aaKnown RBP eCLIP11.96□□□□□ -0.49
LRRTM4-202ENST00000409093 CCDC152Q4G0S7 254 aa11.96□□□□□ -0.49
LRRTM4-202ENST00000409093 MCMDC2Q4G0Z9 681 aa11.96□□□□□ -0.49
LRRTM4-202ENST00000409093 RC3H1Q5TC82 1133 aaKnown RBP11.96□□□□□ -0.49
LRRTM4-202ENST00000409093 CREB3L3Q68CJ9 461 aa11.96□□□□□ -0.49
LRRTM4-202ENST00000409093 TNPO1Q92973 898 aaKnown RBP11.96□□□□□ -0.49
LRRTM4-202ENST00000409093 JAKMIP1Q96N16 626 aaKnown RBP11.96□□□□□ -0.49
LRRTM4-202ENST00000409093 CWC22Q9HCG8 908 aaKnown RBP11.96□□□□□ -0.49
LRRTM4-202ENST00000409093 ABCC12Q96J65 1359 aa11.96□□□□□ -0.49
LRRTM4-202ENST00000409093 ONECUT3O60422 494 aaPredicted RBP11.96□□□□□ -0.49
LRRTM4-202ENST00000409093 PDE8BO95263 885 aa11.96□□□□□ -0.49
LRRTM4-202ENST00000409093 CHGBP05060 677 aa11.96□□□□□ -0.49
LRRTM4-202ENST00000409093 MCM4P33991 863 aa11.96□□□□□ -0.49
LRRTM4-202ENST00000409093 CLCN1P35523 988 aa11.96□□□□□ -0.49
LRRTM4-202ENST00000409093 RNF20Q5VTR2 975 aa11.96□□□□□ -0.49
LRRTM4-202ENST00000409093 SMAP1Q8IYB5 467 aaPredicted RBP11.96□□□□□ -0.49
LRRTM4-202ENST00000409093 ZGPATQ8N5A5 531 aaKnown RBP11.96□□□□□ -0.49
LRRTM4-202ENST00000409093 VGLL2Q8N8G2 317 aa11.96□□□□□ -0.49
LRRTM4-202ENST00000409093 KCNB2Q92953 911 aa11.96□□□□□ -0.49
LRRTM4-202ENST00000409093 CASZ1Q86V15 1759 aa11.96□□□□□ -0.5
LRRTM4-202ENST00000409093 MYH7P12883 1935 aa11.96□□□□□ -0.5
LRRTM4-202ENST00000409093 MROH5Q6ZUA9 1318 aa11.95□□□□□ -0.5
LRRTM4-202ENST00000409093 TAF5LO75529 589 aa11.95□□□□□ -0.5
LRRTM4-202ENST00000409093 RPS6KA4O75676 772 aa11.95□□□□□ -0.5
LRRTM4-202ENST00000409093 CCDC129Q6ZRS4 1044 aa11.95□□□□□ -0.5
LRRTM4-202ENST00000409093 TICAM2Q86XR7 235 aa11.95□□□□□ -0.5
LRRTM4-202ENST00000409093 SEC62Q99442 399 aaKnown RBP11.95□□□□□ -0.5
LRRTM4-202ENST00000409093 MPHOSPH8Q99549 860 aa11.95□□□□□ -0.5
LRRTM4-202ENST00000409093 SEC31BQ9NQW1 1179 aa11.95□□□□□ -0.5
LRRTM4-202ENST00000409093 ARAP2Q8WZ64 1704 aa11.95□□□□□ -0.5
LRRTM4-202ENST00000409093 SLC27A2O14975 620 aa11.95□□□□□ -0.5
LRRTM4-202ENST00000409093 ADCK5Q3MIX3 580 aa11.95□□□□□ -0.5
LRRTM4-202ENST00000409093 BICDL1Q6ZP65 573 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 172 ms