RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 NEUROD6Q96NK8 337 aa19.64■□□□□ 0.73
COL23A1-202ENST00000407622 TTC12Q9H892 705 aaPredicted RBP19.64■□□□□ 0.73
COL23A1-202ENST00000407622 RFX7Q2KHR2 1363 aa19.63■□□□□ 0.73
COL23A1-202ENST00000407622 PLCB2Q00722 1185 aa19.63■□□□□ 0.73
COL23A1-202ENST00000407622 KRT32Q14532 448 aa19.63■□□□□ 0.73
COL23A1-202ENST00000407622 KBTBD3Q8NAB2 608 aa19.63■□□□□ 0.73
COL23A1-202ENST00000407622 ZNF594Q96JF6 807 aaPredicted RBP19.63■□□□□ 0.73
COL23A1-202ENST00000407622 LAMA4Q16363 1823 aa19.63■□□□□ 0.73
COL23A1-202ENST00000407622 GOLIM4O00461 696 aa19.63■□□□□ 0.73
COL23A1-202ENST00000407622 PIP4K2BP78356 416 aa19.63■□□□□ 0.73
COL23A1-202ENST00000407622 DDX11Q96FC9 970 aa19.63■□□□□ 0.73
COL23A1-202ENST00000407622 U3KPZ7 1027 aaPredicted RBP19.63■□□□□ 0.73
COL23A1-202ENST00000407622 NUP188Q5SRE5 1749 aa19.63■□□□□ 0.73
COL23A1-202ENST00000407622 PARP4Q9UKK3 1724 aaKnown RBP19.63■□□□□ 0.73
COL23A1-202ENST00000407622 ELP1O95163 1332 aa19.62■□□□□ 0.73
COL23A1-202ENST00000407622 LRRC24Q50LG9 513 aa19.62■□□□□ 0.73
COL23A1-202ENST00000407622 TOM1L2Q6ZVM7 507 aa19.62■□□□□ 0.73
COL23A1-202ENST00000407622 C17orf53Q8N3J3 647 aaPredicted RBP19.62■□□□□ 0.73
COL23A1-202ENST00000407622 ZBTB3Q9H5J0 574 aa19.62■□□□□ 0.73
COL23A1-202ENST00000407622 KIAA2012Q0VF49 1180 aa19.62■□□□□ 0.73
COL23A1-202ENST00000407622 BRF1Q92994 677 aa19.62■□□□□ 0.73
COL23A1-202ENST00000407622 RRP9O43818 475 aaKnown RBP19.61■□□□□ 0.73
COL23A1-202ENST00000407622 HSP90B1P14625 803 aaKnown RBP19.61■□□□□ 0.73
COL23A1-202ENST00000407622 LEO1Q8WVC0 666 aaPredicted RBP19.61■□□□□ 0.73
COL23A1-202ENST00000407622 SPATA32Q96LK8 384 aa19.61■□□□□ 0.73
COL23A1-202ENST00000407622 PLEKHG2Q9H7P9 1386 aa19.61■□□□□ 0.73
COL23A1-202ENST00000407622 TERF1P54274 439 aa19.6■□□□□ 0.73
COL23A1-202ENST00000407622 SCRN1Q12765 414 aa19.6■□□□□ 0.73
COL23A1-202ENST00000407622 AEBP2Q6ZN18 517 aaPredicted RBP19.6■□□□□ 0.73
COL23A1-202ENST00000407622 PAG1Q9NWQ8 432 aa19.6■□□□□ 0.73
COL23A1-202ENST00000407622 CWC25Q9NXE8 425 aaPredicted RBP19.6■□□□□ 0.73
COL23A1-202ENST00000407622 DACT1Q9NYF0 836 aa19.6■□□□□ 0.73
COL23A1-202ENST00000407622 SH3TC1Q8TE82 1336 aa19.6■□□□□ 0.73
COL23A1-202ENST00000407622 EVA1CP58658 441 aa19.6■□□□□ 0.73
COL23A1-202ENST00000407622 CKAP2LQ8IYA6 745 aa19.6■□□□□ 0.73
COL23A1-202ENST00000407622 NUP62CLQ9H1M0 184 aa19.6■□□□□ 0.73
COL23A1-202ENST00000407622 STRN4Q9NRL3 753 aa19.6■□□□□ 0.73
COL23A1-202ENST00000407622 PGBD1Q96JS3 809 aa19.59■□□□□ 0.73
COL23A1-202ENST00000407622 CARD10Q9BWT7 1032 aa19.59■□□□□ 0.73
COL23A1-202ENST00000407622 UBR2Q8IWV8 1755 aa19.59■□□□□ 0.73
COL23A1-202ENST00000407622 PALLDQ8WX93 1383 aa19.59■□□□□ 0.73
COL23A1-202ENST00000407622 COL22A1Q8NFW1 1626 aaPredicted RBP19.59■□□□□ 0.73
COL23A1-202ENST00000407622 UQCRHLA0A096LP55 91 aa19.59■□□□□ 0.73
COL23A1-202ENST00000407622 UQCRHP07919 91 aa19.59■□□□□ 0.73
COL23A1-202ENST00000407622 CCDC192P0DO97 292 aa19.59■□□□□ 0.73
COL23A1-202ENST00000407622 RESTQ13127 1097 aa19.59■□□□□ 0.73
COL23A1-202ENST00000407622 PUS3Q9BZE2 481 aaKnown RBP19.59■□□□□ 0.73
COL23A1-202ENST00000407622 MRVI1Q9Y6F6 885 aa19.59■□□□□ 0.73
COL23A1-202ENST00000407622 KCPQ6ZWJ8 1503 aa19.59■□□□□ 0.73
COL23A1-202ENST00000407622 UBAP1LF5GYI3 381 aa19.58■□□□□ 0.73
COL23A1-202ENST00000407622 PDIA4P13667 645 aaKnown RBP19.58■□□□□ 0.73
COL23A1-202ENST00000407622 FOSBP53539 338 aa19.58■□□□□ 0.73
COL23A1-202ENST00000407622 MAP3K11Q16584 847 aa19.58■□□□□ 0.73
COL23A1-202ENST00000407622 ZCRB1Q8TBF4 217 aaKnown RBP19.58■□□□□ 0.73
COL23A1-202ENST00000407622 SCAND2PQ9GZW5 306 aaPredicted RBP19.58■□□□□ 0.73
COL23A1-202ENST00000407622 RBM10P98175 930 aaKnown RBP19.58■□□□□ 0.72
COL23A1-202ENST00000407622 COL16A1Q07092 1604 aaPredicted RBP19.58■□□□□ 0.72
COL23A1-202ENST00000407622 BTG4Q9NY30 223 aa19.58■□□□□ 0.72
COL23A1-202ENST00000407622 PCDH11XQ9BZA7 1347 aa19.57■□□□□ 0.72
COL23A1-202ENST00000407622 PCDH11YQ9BZA8 1340 aa19.57■□□□□ 0.72
COL23A1-202ENST00000407622 PPFIA3O75145 1194 aa19.57■□□□□ 0.72
COL23A1-202ENST00000407622 TYRO3Q06418 890 aa19.57■□□□□ 0.72
COL23A1-202ENST00000407622 PHLPP1O60346 1717 aa19.57■□□□□ 0.72
COL23A1-202ENST00000407622 APOBRQ0VD83 1088 aa19.57■□□□□ 0.72
COL23A1-202ENST00000407622 NR1I2O75469 434 aa19.56■□□□□ 0.72
COL23A1-202ENST00000407622 CTDNEP1O95476 244 aa19.56■□□□□ 0.72
COL23A1-202ENST00000407622 ZMYM1Q5SVZ6 1142 aa19.56■□□□□ 0.72
COL23A1-202ENST00000407622 PIBF1Q8WXW3 757 aa19.56■□□□□ 0.72
COL23A1-202ENST00000407622 A0A1B0GUL7 405 aa19.56■□□□□ 0.72
COL23A1-202ENST00000407622 GOLGA6L4A6NEF3 574 aa19.56■□□□□ 0.72
COL23A1-202ENST00000407622 EYA2O00167 538 aa19.56■□□□□ 0.72
COL23A1-202ENST00000407622 IL15P40933 162 aaPredicted RBP19.56■□□□□ 0.72
COL23A1-202ENST00000407622 FGD1P98174 961 aa19.56■□□□□ 0.72
COL23A1-202ENST00000407622 LUZP1Q86V48 1076 aa19.56■□□□□ 0.72
COL23A1-202ENST00000407622 TNMDQ9H2S6 317 aa19.56■□□□□ 0.72
COL23A1-202ENST00000407622 MAST3O60307 1309 aa19.55■□□□□ 0.72
COL23A1-202ENST00000407622 HSPD1P10809 573 aaKnown RBP19.55■□□□□ 0.72
COL23A1-202ENST00000407622 CHST3Q7LGC8 479 aa19.55■□□□□ 0.72
COL23A1-202ENST00000407622 SPC24Q8NBT2 197 aa19.55■□□□□ 0.72
COL23A1-202ENST00000407622 NSUN7Q8NE18 718 aaKnown RBP19.55■□□□□ 0.72
COL23A1-202ENST00000407622 SMARCC2Q8TAQ2 1214 aa19.55■□□□□ 0.72
COL23A1-202ENST00000407622 HELLSQ9NRZ9 838 aa19.55■□□□□ 0.72
COL23A1-202ENST00000407622 H3BQV1 296 aa19.54■□□□□ 0.72
COL23A1-202ENST00000407622 PFKFB2O60825 505 aa19.54■□□□□ 0.72
COL23A1-202ENST00000407622 IFFO2Q5TF58 517 aa19.54■□□□□ 0.72
COL23A1-202ENST00000407622 DHX32Q7L7V1 743 aaKnown RBP19.54■□□□□ 0.72
COL23A1-202ENST00000407622 FAM200AQ8TCP9 573 aa19.54■□□□□ 0.72
COL23A1-202ENST00000407622 FTOQ9C0B1 505 aaKnown RBP eCLIP19.54■□□□□ 0.72
COL23A1-202ENST00000407622 KCNF1Q9H3M0 494 aa19.54■□□□□ 0.72
COL23A1-202ENST00000407622 NCOA5Q9HCD5 579 aaKnown RBP19.54■□□□□ 0.72
COL23A1-202ENST00000407622 GPR108Q9NPR9 543 aa19.54■□□□□ 0.72
COL23A1-202ENST00000407622 M0R2C6 588 aa19.54■□□□□ 0.72
COL23A1-202ENST00000407622 IFIT1P09914 478 aaKnown RBP19.54■□□□□ 0.72
COL23A1-202ENST00000407622 CCT2P78371 535 aaKnown RBP19.54■□□□□ 0.72
COL23A1-202ENST00000407622 CEBPZQ03701 1054 aaKnown RBP19.54■□□□□ 0.72
COL23A1-202ENST00000407622 NOLC1Q14978 699 aaKnown RBP eCLIP19.54■□□□□ 0.72
COL23A1-202ENST00000407622 TTLL5Q6EMB2 1281 aa19.54■□□□□ 0.72
COL23A1-202ENST00000407622 KLHL34Q8N239 644 aa19.54■□□□□ 0.72
COL23A1-202ENST00000407622 CCDC191Q8NCU4 936 aa19.54■□□□□ 0.72
COL23A1-202ENST00000407622 DSCC1Q9BVC3 393 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms