RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 AK2P54819 239 aa29.59■■■□□ 2.33
DNMT3A-206ENST00000406659 ADORA1P30542 326 aa29.59■■■□□ 2.33
DNMT3A-206ENST00000406659 ADCK5Q3MIX3 580 aa29.59■■■□□ 2.33
DNMT3A-206ENST00000406659 PDRG1Q9NUG6 133 aa29.59■■■□□ 2.33
DNMT3A-206ENST00000406659 LIMCH1Q9UPQ0 1083 aa29.59■■■□□ 2.33
DNMT3A-206ENST00000406659 GOLGA6L22H0YM25 854 aa29.58■■■□□ 2.33
DNMT3A-206ENST00000406659 PSMA5P28066 241 aa29.58■■■□□ 2.33
DNMT3A-206ENST00000406659 FAM177BA6PVY3 158 aa29.57■■■□□ 2.32
DNMT3A-206ENST00000406659 ATP2B3Q16720 1220 aa29.57■■■□□ 2.32
DNMT3A-206ENST00000406659 VPS53Q5VIR6 699 aa29.57■■■□□ 2.32
DNMT3A-206ENST00000406659 HMG20BQ9P0W2 317 aa29.57■■■□□ 2.32
DNMT3A-206ENST00000406659 CPA1P15085 419 aa29.57■■■□□ 2.32
DNMT3A-206ENST00000406659 RUFY3Q7L099 469 aa29.57■■■□□ 2.32
DNMT3A-206ENST00000406659 HELLSQ9NRZ9 838 aa29.57■■■□□ 2.32
DNMT3A-206ENST00000406659 ZNF652Q9Y2D9 606 aa29.57■■■□□ 2.32
DNMT3A-206ENST00000406659 RIC1Q4ADV7 1423 aa29.56■■■□□ 2.32
DNMT3A-206ENST00000406659 BAG4O95429 457 aaKnown RBP29.56■■■□□ 2.32
DNMT3A-206ENST00000406659 PKP1Q13835 747 aa29.56■■■□□ 2.32
DNMT3A-206ENST00000406659 NIP7Q9Y221 180 aaKnown RBP eCLIP29.56■■■□□ 2.32
DNMT3A-206ENST00000406659 HCLS1P14317 486 aaPredicted RBP29.55■■■□□ 2.32
DNMT3A-206ENST00000406659 HSP90B1P14625 803 aaKnown RBP29.55■■■□□ 2.32
DNMT3A-206ENST00000406659 LINC00116Q8NCU8 138 aa29.55■■■□□ 2.32
DNMT3A-206ENST00000406659 SEC62Q99442 399 aaKnown RBP29.55■■■□□ 2.32
DNMT3A-206ENST00000406659 U3KPZ7 1027 aaPredicted RBP29.55■■■□□ 2.32
DNMT3A-206ENST00000406659 SPEF2Q9C093 1822 aa29.55■■■□□ 2.32
DNMT3A-206ENST00000406659 ZNF831Q5JPB2 1677 aa29.55■■■□□ 2.32
DNMT3A-206ENST00000406659 MEX3CQ5U5Q3 659 aaKnown RBP29.54■■■□□ 2.32
DNMT3A-206ENST00000406659 USPL1Q5W0Q7 1092 aa29.54■■■□□ 2.32
DNMT3A-206ENST00000406659 CCDC129Q6ZRS4 1044 aa29.54■■■□□ 2.32
DNMT3A-206ENST00000406659 COL5A3P25940 1745 aaPredicted RBP29.54■■■□□ 2.32
DNMT3A-206ENST00000406659 CHGBP05060 677 aa29.54■■■□□ 2.32
DNMT3A-206ENST00000406659 FKBP4Q02790 459 aaKnown RBP eCLIP29.54■■■□□ 2.32
DNMT3A-206ENST00000406659 LRRFIP1Q32MZ4 808 aaKnown RBP29.54■■■□□ 2.32
DNMT3A-206ENST00000406659 RNF113AO15541 343 aaKnown RBP29.52■■■□□ 2.32
DNMT3A-206ENST00000406659 ZMYM1Q5SVZ6 1142 aa29.52■■■□□ 2.32
DNMT3A-206ENST00000406659 CERKQ8TCT0 537 aa29.52■■■□□ 2.32
DNMT3A-206ENST00000406659 RPAP1Q9BWH6 1393 aaPredicted RBP29.52■■■□□ 2.32
DNMT3A-206ENST00000406659 SKOR2Q2VWA4 1001 aaPredicted RBP29.52■■■□□ 2.32
DNMT3A-206ENST00000406659 TSGA10IPQ3SY00 556 aa29.52■■■□□ 2.32
DNMT3A-206ENST00000406659 ZSCAN31Q96LW9 406 aaPredicted RBP29.52■■■□□ 2.32
DNMT3A-206ENST00000406659 ZDHHC9Q9Y397 364 aa29.52■■■□□ 2.32
DNMT3A-206ENST00000406659 CLEC4GQ6UXB4 293 aa29.51■■■□□ 2.31
DNMT3A-206ENST00000406659 NTSR2O95665 410 aa29.5■■■□□ 2.31
DNMT3A-206ENST00000406659 KRT32Q14532 448 aa29.5■■■□□ 2.31
DNMT3A-206ENST00000406659 BLOC1S2Q6QNY1 142 aa29.5■■■□□ 2.31
DNMT3A-206ENST00000406659 VGLL2Q8N8G2 317 aa29.5■■■□□ 2.31
DNMT3A-206ENST00000406659 LARP6Q9BRS8 491 aaKnown RBP29.5■■■□□ 2.31
DNMT3A-206ENST00000406659 ABCC12Q96J65 1359 aa29.5■■■□□ 2.31
DNMT3A-206ENST00000406659 PDE8BO95263 885 aa29.49■■■□□ 2.31
DNMT3A-206ENST00000406659 MROH5Q6ZUA9 1318 aa29.49■■■□□ 2.31
DNMT3A-206ENST00000406659 CNTNAP4Q9C0A0 1308 aa29.49■■■□□ 2.31
DNMT3A-206ENST00000406659 CCDC152Q4G0S7 254 aa29.49■■■□□ 2.31
DNMT3A-206ENST00000406659 ZSCAN21Q9Y5A6 473 aaPredicted RBP29.49■■■□□ 2.31
DNMT3A-206ENST00000406659 THSD7AQ9UPZ6 1657 aa29.48■■■□□ 2.31
DNMT3A-206ENST00000406659 KCNQ4P56696 695 aa29.48■■■□□ 2.31
DNMT3A-206ENST00000406659 PTF1AQ7RTS3 328 aa29.48■■■□□ 2.31
DNMT3A-206ENST00000406659 SH2B1Q9NRF2 756 aaPredicted RBP29.48■■■□□ 2.31
DNMT3A-206ENST00000406659 ZAP70P43403 619 aa29.47■■■□□ 2.31
DNMT3A-206ENST00000406659 SLFNL1Q499Z3 407 aa29.47■■■□□ 2.31
DNMT3A-206ENST00000406659 MCTP1Q6DN14 999 aa29.47■■■□□ 2.31
DNMT3A-206ENST00000406659 MPHOSPH8Q99549 860 aa29.47■■■□□ 2.31
DNMT3A-206ENST00000406659 GZF1Q9H116 711 aaPredicted RBP29.47■■■□□ 2.31
DNMT3A-206ENST00000406659 BRD1O95696 1058 aa29.46■■■□□ 2.31
DNMT3A-206ENST00000406659 ZFYP08048 801 aaPredicted RBP29.46■■■□□ 2.31
DNMT3A-206ENST00000406659 RPS6KB1P23443 525 aa29.46■■■□□ 2.31
DNMT3A-206ENST00000406659 SCARF1Q14162 830 aa29.46■■■□□ 2.31
DNMT3A-206ENST00000406659 ZNF512BQ96KM6 892 aaPredicted RBP29.46■■■□□ 2.31
DNMT3A-206ENST00000406659 GJD4Q96KN9 370 aaPredicted RBP29.46■■■□□ 2.31
DNMT3A-206ENST00000406659 DSCC1Q9BVC3 393 aa29.46■■■□□ 2.31
DNMT3A-206ENST00000406659 TAF6LQ9Y6J9 622 aa29.46■■■□□ 2.31
DNMT3A-206ENST00000406659 BCORQ6W2J9 1755 aa29.45■■■□□ 2.31
DNMT3A-206ENST00000406659 ANKRD1Q15327 319 aa29.45■■■□□ 2.31
DNMT3A-206ENST00000406659 PUM3Q15397 648 aaKnown RBP29.45■■■□□ 2.31
DNMT3A-206ENST00000406659 RC3H1Q5TC82 1133 aaKnown RBP29.45■■■□□ 2.31
DNMT3A-206ENST00000406659 ALDH8A1Q9H2A2 487 aaPredicted RBP29.45■■■□□ 2.31
DNMT3A-206ENST00000406659 LRP5O75197 1615 aa29.44■■■□□ 2.3
DNMT3A-206ENST00000406659 FOXD4L5Q5VV16 416 aaPredicted RBP29.44■■■□□ 2.3
DNMT3A-206ENST00000406659 FOXD4L4Q8WXT5 416 aaPredicted RBP29.44■■■□□ 2.3
DNMT3A-206ENST00000406659 LPIN2Q92539 896 aa29.44■■■□□ 2.3
DNMT3A-206ENST00000406659 SEC31BQ9NQW1 1179 aa29.44■■■□□ 2.3
DNMT3A-206ENST00000406659 MAST3O60307 1309 aa29.43■■■□□ 2.3
DNMT3A-206ENST00000406659 FAM182BQ5T319 152 aa29.43■■■□□ 2.3
DNMT3A-206ENST00000406659 DDX60Q8IY21 1712 aaKnown RBP29.43■■■□□ 2.3
DNMT3A-206ENST00000406659 HELBQ8NG08 1087 aaPredicted RBP29.43■■■□□ 2.3
DNMT3A-206ENST00000406659 SMC3Q9UQE7 1217 aa29.43■■■□□ 2.3
DNMT3A-206ENST00000406659 BTAF1O14981 1849 aa29.43■■■□□ 2.3
DNMT3A-206ENST00000406659 RTL9Q8NET4 1388 aa29.43■■■□□ 2.3
DNMT3A-206ENST00000406659 RGL2O15211 777 aa29.42■■■□□ 2.3
DNMT3A-206ENST00000406659 LARGE1O95461 756 aa29.42■■■□□ 2.3
DNMT3A-206ENST00000406659 HSPA1LP34931 641 aa29.42■■■□□ 2.3
DNMT3A-206ENST00000406659 IGHMBP2P38935 993 aaKnown RBP29.42■■■□□ 2.3
DNMT3A-206ENST00000406659 AFF2P51816 1311 aa29.42■■■□□ 2.3
DNMT3A-206ENST00000406659 NHSQ6T4R5 1651 aa29.42■■■□□ 2.3
DNMT3A-206ENST00000406659 WASHC4Q2M389 1173 aa29.41■■■□□ 2.3
DNMT3A-206ENST00000406659 NEK1Q96PY6 1258 aa29.41■■■□□ 2.3
DNMT3A-206ENST00000406659 RPS6KA4O75676 772 aa29.41■■■□□ 2.3
DNMT3A-206ENST00000406659 CYP21A2P08686 494 aa29.41■■■□□ 2.3
DNMT3A-206ENST00000406659 UQCRFS1P1P0C7P4 283 aa29.41■■■□□ 2.3
DNMT3A-206ENST00000406659 SLC5A1P13866 664 aa29.41■■■□□ 2.3
DNMT3A-206ENST00000406659 MCAMP43121 646 aa29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms