RNA–Protein interactions for RNA: ENST00000406638.6

LSP1-204, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-204ENST00000406638 NEURL1BA8MQ27 555 aa19.18■□□□□ 0.66
LSP1-204ENST00000406638 SURF6O75683 361 aaKnown RBP19.18■□□□□ 0.66
LSP1-204ENST00000406638 TYRO3Q06418 890 aa19.18■□□□□ 0.66
LSP1-204ENST00000406638 FAM98CQ17RN3 349 aaKnown RBP19.18■□□□□ 0.66
LSP1-204ENST00000406638 SSH3Q8TE77 659 aa19.18■□□□□ 0.66
LSP1-204ENST00000406638 CHMP4AQ9BY43 222 aa19.18■□□□□ 0.66
LSP1-204ENST00000406638 LARGE1O95461 756 aa19.17■□□□□ 0.66
LSP1-204ENST00000406638 AEBP2Q6ZN18 517 aaPredicted RBP19.17■□□□□ 0.66
LSP1-204ENST00000406638 KLHDC4Q8TBB5 520 aa19.17■□□□□ 0.66
LSP1-204ENST00000406638 TIGD1Q96MW7 591 aa19.17■□□□□ 0.66
LSP1-204ENST00000406638 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.17■□□□□ 0.66
LSP1-204ENST00000406638 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.17■□□□□ 0.66
LSP1-204ENST00000406638 SPATA31A5Q5VU36 1347 aa19.17■□□□□ 0.66
LSP1-204ENST00000406638 SPATA31A7Q8IWB4 1347 aa19.17■□□□□ 0.66
LSP1-204ENST00000406638 GRM8O00222 908 aa19.17■□□□□ 0.66
LSP1-204ENST00000406638 DDB1Q16531 1140 aa19.17■□□□□ 0.66
LSP1-204ENST00000406638 METTL22Q9BUU2 404 aaPredicted RBP19.17■□□□□ 0.66
LSP1-204ENST00000406638 TNS2Q63HR2 1409 aa19.17■□□□□ 0.66
LSP1-204ENST00000406638 VPS37CA5D8V6 355 aaPredicted RBP19.16■□□□□ 0.66
LSP1-204ENST00000406638 CEP135Q66GS9 1140 aa19.16■□□□□ 0.66
LSP1-204ENST00000406638 RASEFQ8IZ41 740 aa19.16■□□□□ 0.66
LSP1-204ENST00000406638 CACTINQ8WUQ7 758 aaKnown RBP19.16■□□□□ 0.66
LSP1-204ENST00000406638 BICC1Q9H694 974 aaKnown RBP19.16■□□□□ 0.66
LSP1-204ENST00000406638 ZNF215Q9UL58 517 aaPredicted RBP19.16■□□□□ 0.66
LSP1-204ENST00000406638 LIMCH1Q9UPQ0 1083 aa19.16■□□□□ 0.66
LSP1-204ENST00000406638 ALDH1L1O75891 902 aa19.16■□□□□ 0.66
LSP1-204ENST00000406638 LIG1P18858 919 aa19.16■□□□□ 0.66
LSP1-204ENST00000406638 GJB2P29033 226 aa19.16■□□□□ 0.66
LSP1-204ENST00000406638 MAP3K11Q16584 847 aa19.16■□□□□ 0.66
LSP1-204ENST00000406638 ANO6Q4KMQ2 910 aa19.16■□□□□ 0.66
LSP1-204ENST00000406638 FAM182BQ5T319 152 aa19.16■□□□□ 0.66
LSP1-204ENST00000406638 CCDC83Q8IWF9 413 aa19.16■□□□□ 0.66
LSP1-204ENST00000406638 TRERF1Q96PN7 1200 aa19.16■□□□□ 0.66
LSP1-204ENST00000406638 CBX8Q9HC52 389 aa19.16■□□□□ 0.66
LSP1-204ENST00000406638 SNX14Q9Y5W7 946 aa19.16■□□□□ 0.66
LSP1-204ENST00000406638 NPHP1O15259 732 aa19.15■□□□□ 0.66
LSP1-204ENST00000406638 POLA2Q14181 598 aa19.15■□□□□ 0.66
LSP1-204ENST00000406638 TTC14Q96N46 770 aa19.15■□□□□ 0.66
LSP1-204ENST00000406638 MTMR6Q9Y217 621 aa19.15■□□□□ 0.66
LSP1-204ENST00000406638 N4BP2Q86UW6 1770 aaPredicted RBP19.15■□□□□ 0.66
LSP1-204ENST00000406638 KCNQ2O43526 872 aa19.15■□□□□ 0.66
LSP1-204ENST00000406638 GCKRQ14397 625 aa19.15■□□□□ 0.66
LSP1-204ENST00000406638 NUTM1Q86Y26 1132 aa19.15■□□□□ 0.66
LSP1-204ENST00000406638 NRAPQ86VF7 1730 aa19.14■□□□□ 0.65
LSP1-204ENST00000406638 ZNF75DP51815 510 aa19.14■□□□□ 0.65
LSP1-204ENST00000406638 FAM173BQ6P4H8 233 aa19.14■□□□□ 0.65
LSP1-204ENST00000406638 NUP62CLQ9H1M0 184 aa19.14■□□□□ 0.65
LSP1-204ENST00000406638 SLIT2O94813 1529 aa19.14■□□□□ 0.65
LSP1-204ENST00000406638 PTF1AQ7RTS3 328 aa19.14■□□□□ 0.65
LSP1-204ENST00000406638 ZNF397Q8NF99 534 aaPredicted RBP19.14■□□□□ 0.65
LSP1-204ENST00000406638 IL17RAQ96F46 866 aa19.14■□□□□ 0.65
LSP1-204ENST00000406638 USP27XA6NNY8 438 aa19.13■□□□□ 0.65
LSP1-204ENST00000406638 CCDC144BQ3MJ40 725 aa19.13■□□□□ 0.65
LSP1-204ENST00000406638 UBE3BQ7Z3V4 1068 aa19.13■□□□□ 0.65
LSP1-204ENST00000406638 CCDC144CPQ8IYA2 1237 aa19.13■□□□□ 0.65
LSP1-204ENST00000406638 BCL9O00512 1426 aa19.13■□□□□ 0.65
LSP1-204ENST00000406638 UBR2Q8IWV8 1755 aa19.13■□□□□ 0.65
LSP1-204ENST00000406638 FBXO38Q6PIJ6 1188 aa19.13■□□□□ 0.65
LSP1-204ENST00000406638 FERMT3Q86UX7 667 aa19.13■□□□□ 0.65
LSP1-204ENST00000406638 CERKQ8TCT0 537 aa19.13■□□□□ 0.65
LSP1-204ENST00000406638 CLIP2Q9UDT6 1046 aa19.13■□□□□ 0.65
LSP1-204ENST00000406638 HSPA1LP34931 641 aa19.12■□□□□ 0.65
LSP1-204ENST00000406638 RBM6P78332 1123 aaKnown RBP19.12■□□□□ 0.65
LSP1-204ENST00000406638 NEXNQ0ZGT2 675 aa19.12■□□□□ 0.65
LSP1-204ENST00000406638 TTC6Q86TZ1 520 aa19.12■□□□□ 0.65
LSP1-204ENST00000406638 LRP6O75581 1613 aa19.12■□□□□ 0.65
LSP1-204ENST00000406638 PAPPAQ13219 1627 aa19.12■□□□□ 0.65
LSP1-204ENST00000406638 ARID5BQ14865 1188 aa19.12■□□□□ 0.65
LSP1-204ENST00000406638 ELF2Q15723 593 aa19.12■□□□□ 0.65
LSP1-204ENST00000406638 ITGB4P16144 1822 aa19.11■□□□□ 0.65
LSP1-204ENST00000406638 KCNQ4P56696 695 aa19.11■□□□□ 0.65
LSP1-204ENST00000406638 PLA2G4DQ86XP0 818 aa19.11■□□□□ 0.65
LSP1-204ENST00000406638 PLBD2Q8NHP8 589 aa19.11■□□□□ 0.65
LSP1-204ENST00000406638 SIL1Q9H173 461 aa19.11■□□□□ 0.65
LSP1-204ENST00000406638 TNMDQ9H2S6 317 aa19.11■□□□□ 0.65
LSP1-204ENST00000406638 DACT1Q9NYF0 836 aa19.11■□□□□ 0.65
LSP1-204ENST00000406638 BCL9LQ86UU0 1499 aa19.11■□□□□ 0.65
LSP1-204ENST00000406638 CASTP20810 708 aaKnown RBP19.11■□□□□ 0.65
LSP1-204ENST00000406638 CAPN2P17655 700 aa19.1■□□□□ 0.65
LSP1-204ENST00000406638 RHPN1Q8TCX5 695 aa19.1■□□□□ 0.65
LSP1-204ENST00000406638 A0A087WZG4 1122 aa19.09■□□□□ 0.65
LSP1-204ENST00000406638 STAP2Q9UGK3 403 aa19.09■□□□□ 0.65
LSP1-204ENST00000406638 JCADQ9P266 1359 aa19.09■□□□□ 0.65
LSP1-204ENST00000406638 TRMT1Q9NXH9 659 aaKnown RBP19.09■□□□□ 0.65
LSP1-204ENST00000406638 ZBTB1Q9Y2K1 713 aa19.09■□□□□ 0.65
LSP1-204ENST00000406638 RAD50Q92878 1312 aa19.09■□□□□ 0.65
LSP1-204ENST00000406638 PTPN14Q15678 1187 aa19.08■□□□□ 0.65
LSP1-204ENST00000406638 NECAB1Q8N987 351 aa19.08■□□□□ 0.65
LSP1-204ENST00000406638 DNAJC25Q9H1X3 360 aa19.08■□□□□ 0.65
LSP1-204ENST00000406638 CALCOCO1Q9P1Z2 691 aa19.08■□□□□ 0.65
LSP1-204ENST00000406638 UTYO14607 1347 aa19.08■□□□□ 0.65
LSP1-204ENST00000406638 TFIP11Q9UBB9 837 aaKnown RBP19.08■□□□□ 0.64
LSP1-204ENST00000406638 LAMB4A4D0S4 1761 aa19.08■□□□□ 0.64
LSP1-204ENST00000406638 ZNF165P49910 485 aa19.07■□□□□ 0.64
LSP1-204ENST00000406638 OS9Q13438 667 aaPredicted RBP19.07■□□□□ 0.64
LSP1-204ENST00000406638 SGSM2O43147 1006 aa19.07■□□□□ 0.64
LSP1-204ENST00000406638 CWC27Q6UX04 472 aaKnown RBP19.07■□□□□ 0.64
LSP1-204ENST00000406638 SYNE4Q8N205 404 aa19.07■□□□□ 0.64
LSP1-204ENST00000406638 DNAJC2Q99543 621 aaKnown RBP19.07■□□□□ 0.64
LSP1-204ENST00000406638 ZNF446Q9NWS9 450 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms