RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 VPS37DQ86XT2 251 aa7.28□□□□□ -1.24
HMGB3P18-201ENST00000406327 C1orf127Q8N9H9 656 aa7.28□□□□□ -1.24
HMGB3P18-201ENST00000406327 ARMC5Q96C12 935 aa7.28□□□□□ -1.24
HMGB3P18-201ENST00000406327 PNMA5Q96PV4 448 aa7.28□□□□□ -1.24
HMGB3P18-201ENST00000406327 BCO2Q9BYV7 579 aa7.28□□□□□ -1.24
HMGB3P18-201ENST00000406327 OSBPL7Q9BZF2 842 aa7.28□□□□□ -1.24
HMGB3P18-201ENST00000406327 CHRDQ9H2X0 955 aa7.28□□□□□ -1.24
HMGB3P18-201ENST00000406327 ZFYVE1Q9HBF4 777 aa7.28□□□□□ -1.24
HMGB3P18-201ENST00000406327 GGT7Q9UJ14 662 aa7.28□□□□□ -1.24
HMGB3P18-201ENST00000406327 INPP5FQ9Y2H2 1132 aa7.28□□□□□ -1.24
HMGB3P18-201ENST00000406327 PCDHGC4Q9Y5F7 938 aa7.28□□□□□ -1.24
HMGB3P18-201ENST00000406327 EREGO14944 169 aa7.27□□□□□ -1.25
HMGB3P18-201ENST00000406327 IRS1P35568 1242 aa7.27□□□□□ -1.25
HMGB3P18-201ENST00000406327 PWP1Q13610 501 aa7.27□□□□□ -1.25
HMGB3P18-201ENST00000406327 PI16Q6UXB8 463 aa7.27□□□□□ -1.25
HMGB3P18-201ENST00000406327 DDX41Q9UJV9 622 aaKnown RBP7.27□□□□□ -1.25
HMGB3P18-201ENST00000406327 PPM1HQ9ULR3 514 aa7.27□□□□□ -1.25
HMGB3P18-201ENST00000406327 ATP2B1P20020 1258 aa7.26□□□□□ -1.25
HMGB3P18-201ENST00000406327 GRNP28799 593 aaKnown RBP7.26□□□□□ -1.25
HMGB3P18-201ENST00000406327 SOX18P35713 384 aa7.26□□□□□ -1.25
HMGB3P18-201ENST00000406327 NEUROD1Q13562 356 aa7.26□□□□□ -1.25
HMGB3P18-201ENST00000406327 GPAT2Q6NUI2 795 aa7.26□□□□□ -1.25
HMGB3P18-201ENST00000406327 NXPE4Q6UWF7 544 aa7.26□□□□□ -1.25
HMGB3P18-201ENST00000406327 OR13H1Q8NG92 308 aa7.26□□□□□ -1.25
HMGB3P18-201ENST00000406327 GMCL1Q96IK5 515 aa7.26□□□□□ -1.25
HMGB3P18-201ENST00000406327 NOC4LQ9BVI4 516 aaKnown RBP7.26□□□□□ -1.25
HMGB3P18-201ENST00000406327 ZCCHC2Q9C0B9 1178 aaKnown RBP7.26□□□□□ -1.25
HMGB3P18-201ENST00000406327 EHD4Q9H223 541 aa7.26□□□□□ -1.25
HMGB3P18-201ENST00000406327 ACBD3Q9H3P7 528 aa7.26□□□□□ -1.25
HMGB3P18-201ENST00000406327 CNTN3Q9P232 1028 aa7.26□□□□□ -1.25
HMGB3P18-201ENST00000406327 DNMT3LQ9UJW3 386 aa7.26□□□□□ -1.25
HMGB3P18-201ENST00000406327 KHNYNO15037 678 aaKnown RBP7.25□□□□□ -1.25
HMGB3P18-201ENST00000406327 EFSO43281 561 aa7.25□□□□□ -1.25
HMGB3P18-201ENST00000406327 POLR3DP05423 398 aaPredicted RBP7.25□□□□□ -1.25
HMGB3P18-201ENST00000406327 PSAPP07602 524 aa7.25□□□□□ -1.25
HMGB3P18-201ENST00000406327 RARAP10276 462 aa7.25□□□□□ -1.25
HMGB3P18-201ENST00000406327 RLBP1P12271 317 aa7.25□□□□□ -1.25
HMGB3P18-201ENST00000406327 GRM2Q14416 872 aa7.25□□□□□ -1.25
HMGB3P18-201ENST00000406327 PRPF40BQ6NWY9 871 aaKnown RBP7.25□□□□□ -1.25
HMGB3P18-201ENST00000406327 RIPOR1Q6ZS17 1223 aa7.25□□□□□ -1.25
HMGB3P18-201ENST00000406327 NUCKS1Q9H1E3 243 aaKnown RBP7.25□□□□□ -1.25
HMGB3P18-201ENST00000406327 PRKAG2Q9UGJ0 569 aa7.25□□□□□ -1.25
HMGB3P18-201ENST00000406327 TTF2Q9UNY4 1162 aaKnown RBP7.25□□□□□ -1.25
HMGB3P18-201ENST00000406327 CANXP27824 592 aaKnown RBP7.24□□□□□ -1.25
HMGB3P18-201ENST00000406327 ARID5AQ03989 594 aa7.24□□□□□ -1.25
HMGB3P18-201ENST00000406327 ANKRD24Q8TF21 1146 aa7.24□□□□□ -1.25
HMGB3P18-201ENST00000406327 CNTNAP3BQ96NU0 1288 aa7.24□□□□□ -1.25
HMGB3P18-201ENST00000406327 GMLQ99445 158 aa7.24□□□□□ -1.25
HMGB3P18-201ENST00000406327 CNTNAP3Q9BZ76 1288 aa7.24□□□□□ -1.25
HMGB3P18-201ENST00000406327 GSX2Q9BZM3 304 aa7.24□□□□□ -1.25
HMGB3P18-201ENST00000406327 SASH3O75995 380 aa7.23□□□□□ -1.25
HMGB3P18-201ENST00000406327 MAP3K6O95382 1288 aa7.23□□□□□ -1.25
HMGB3P18-201ENST00000406327 KRT76Q01546 638 aa7.23□□□□□ -1.25
HMGB3P18-201ENST00000406327 HYAL2Q12891 473 aa7.23□□□□□ -1.25
HMGB3P18-201ENST00000406327 ZNF394Q53GI3 561 aa7.23□□□□□ -1.25
HMGB3P18-201ENST00000406327 MEI1Q5TIA1 1274 aa7.23□□□□□ -1.25
HMGB3P18-201ENST00000406327 SPATA32Q96LK8 384 aa7.23□□□□□ -1.25
HMGB3P18-201ENST00000406327 MARK1Q9P0L2 795 aa7.23□□□□□ -1.25
HMGB3P18-201ENST00000406327 PHF24Q9UPV7 400 aa7.23□□□□□ -1.25
HMGB3P18-201ENST00000406327 SENP3-EIF4A1A0A087X0R7 540 aa7.22□□□□□ -1.25
HMGB3P18-201ENST00000406327 A0A1W2PP55 124 aa7.22□□□□□ -1.25
HMGB3P18-201ENST00000406327 DCDC2BA2VCK2 349 aa7.22□□□□□ -1.25
HMGB3P18-201ENST00000406327 HOXD8P13378 290 aaPredicted RBP7.22□□□□□ -1.25
HMGB3P18-201ENST00000406327 PLAURQ03405 335 aa7.22□□□□□ -1.25
HMGB3P18-201ENST00000406327 XP32Q5T750 250 aa7.22□□□□□ -1.25
HMGB3P18-201ENST00000406327 SOGA3Q5TF21 947 aa7.22□□□□□ -1.25
HMGB3P18-201ENST00000406327 ERMP1Q7Z2K6 904 aa7.22□□□□□ -1.25
HMGB3P18-201ENST00000406327 KRT25Q7Z3Z0 450 aa7.22□□□□□ -1.25
HMGB3P18-201ENST00000406327 NCAPG2Q86XI2 1143 aa7.22□□□□□ -1.25
HMGB3P18-201ENST00000406327 SPACA7Q96KW9 195 aa7.22□□□□□ -1.25
HMGB3P18-201ENST00000406327 LIN7BQ9HAP6 207 aa7.22□□□□□ -1.25
HMGB3P18-201ENST00000406327 TLR7Q9NYK1 1049 aaKnown RBP7.22□□□□□ -1.25
HMGB3P18-201ENST00000406327 KANSL3Q9P2N6 904 aa7.22□□□□□ -1.25
HMGB3P18-201ENST00000406327 PCDHGB7Q9Y5F8 929 aa7.22□□□□□ -1.25
HMGB3P18-201ENST00000406327 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.22□□□□□ -1.25
HMGB3P18-201ENST00000406327 MMP20O60882 483 aa7.21□□□□□ -1.26
HMGB3P18-201ENST00000406327 KIF4AO95239 1232 aa7.21□□□□□ -1.26
HMGB3P18-201ENST00000406327 MAPTP10636 758 aaKnown RBP7.21□□□□□ -1.26
HMGB3P18-201ENST00000406327 DNAJA1P31689 397 aaKnown RBP7.21□□□□□ -1.26
HMGB3P18-201ENST00000406327 TNP2Q05952 138 aa7.21□□□□□ -1.26
HMGB3P18-201ENST00000406327 SPEM2Q0P670 501 aa7.21□□□□□ -1.26
HMGB3P18-201ENST00000406327 SFSWAPQ12872 951 aaKnown RBP7.21□□□□□ -1.26
HMGB3P18-201ENST00000406327 CCDC85BQ15834 202 aaPredicted RBP7.21□□□□□ -1.26
HMGB3P18-201ENST00000406327 PCSK7Q16549 785 aa7.21□□□□□ -1.26
HMGB3P18-201ENST00000406327 DTHD1Q6ZMT9 781 aa7.21□□□□□ -1.26
HMGB3P18-201ENST00000406327 TRIM22Q8IYM9 498 aa7.21□□□□□ -1.26
HMGB3P18-201ENST00000406327 SVOPQ8N4V2 548 aa7.21□□□□□ -1.26
HMGB3P18-201ENST00000406327 GPR161Q8N6U8 529 aaKnown RBP7.21□□□□□ -1.26
HMGB3P18-201ENST00000406327 OXCT2Q9BYC2 517 aaPredicted RBP7.21□□□□□ -1.26
HMGB3P18-201ENST00000406327 CEP44Q9C0F1 390 aa7.21□□□□□ -1.26
HMGB3P18-201ENST00000406327 SRA1Q9HD15 236 aaKnown RBP7.21□□□□□ -1.26
HMGB3P18-201ENST00000406327 CUEDC1Q9NWM3 386 aaPredicted RBP7.21□□□□□ -1.26
HMGB3P18-201ENST00000406327 SALL4Q9UJQ4 1053 aa7.21□□□□□ -1.26
HMGB3P18-201ENST00000406327 ATXN7L1Q9ULK2 861 aaPredicted RBP7.21□□□□□ -1.26
HMGB3P18-201ENST00000406327 SLC35F4A4IF30 521 aa7.2□□□□□ -1.26
HMGB3P18-201ENST00000406327 HMGB1P09429 215 aaKnown RBP7.2□□□□□ -1.26
HMGB3P18-201ENST00000406327 NFKB1P19838 968 aa7.2□□□□□ -1.26
HMGB3P18-201ENST00000406327 TARSP26639 723 aaKnown RBP7.2□□□□□ -1.26
HMGB3P18-201ENST00000406327 GJA8P48165 433 aa7.2□□□□□ -1.26
HMGB3P18-201ENST00000406327 FCGRTP55899 365 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms