RNA–Protein interactions for RNA: ENST00000405957.6

LSP1-203, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LSP1, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-203ENST00000405957 SNX14Q9Y5W7 946 aa20.67■□□□□ 0.9
LSP1-203ENST00000405957 MED23Q9ULK4 1368 aa20.67■□□□□ 0.9
LSP1-203ENST00000405957 CCDC171Q6TFL3 1326 aa20.67■□□□□ 0.9
LSP1-203ENST00000405957 NMIQ13287 307 aaPredicted RBP20.67■□□□□ 0.9
LSP1-203ENST00000405957 AKAP2Q9Y2D5 859 aa20.67■□□□□ 0.9
LSP1-203ENST00000405957 RGPD3A6NKT7 1758 aaPredicted RBP20.66■□□□□ 0.9
LSP1-203ENST00000405957 RGPD4Q7Z3J3 1758 aa20.66■□□□□ 0.9
LSP1-203ENST00000405957 SH3TC1Q8TE82 1336 aa20.66■□□□□ 0.9
LSP1-203ENST00000405957 A0A1B0GUL7 405 aa20.66■□□□□ 0.9
LSP1-203ENST00000405957 ANKRD18BA2A2Z9 1011 aa20.66■□□□□ 0.9
LSP1-203ENST00000405957 RGL2O15211 777 aa20.66■□□□□ 0.9
LSP1-203ENST00000405957 ZKSCAN1P17029 563 aaPredicted RBP20.66■□□□□ 0.9
LSP1-203ENST00000405957 GREM2Q9H772 168 aa20.66■□□□□ 0.9
LSP1-203ENST00000405957 ZNF652Q9Y2D9 606 aa20.66■□□□□ 0.9
LSP1-203ENST00000405957 C4BP0C0L5 1744 aa20.66■□□□□ 0.9
LSP1-203ENST00000405957 ARAP2Q8WZ64 1704 aa20.66■□□□□ 0.9
LSP1-203ENST00000405957 ITGA6P23229 1130 aa20.65■□□□□ 0.9
LSP1-203ENST00000405957 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.65■□□□□ 0.9
LSP1-203ENST00000405957 NEUROD6Q96NK8 337 aa20.65■□□□□ 0.9
LSP1-203ENST00000405957 SUSD4Q5VX71 490 aa20.64■□□□□ 0.9
LSP1-203ENST00000405957 ZGPATQ8N5A5 531 aaKnown RBP20.64■□□□□ 0.9
LSP1-203ENST00000405957 FAM227BQ96M60 508 aa20.64■□□□□ 0.9
LSP1-203ENST00000405957 CCDC85AQ96PX6 553 aaPredicted RBP20.64■□□□□ 0.9
LSP1-203ENST00000405957 UTP14AQ9BVJ6 771 aaKnown RBP20.64■□□□□ 0.9
LSP1-203ENST00000405957 ABCC12Q96J65 1359 aa20.64■□□□□ 0.89
LSP1-203ENST00000405957 CASZ1Q86V15 1759 aa20.64■□□□□ 0.89
LSP1-203ENST00000405957 GOLGA6L3A6NEY3 463 aa20.64■□□□□ 0.89
LSP1-203ENST00000405957 RNF20Q5VTR2 975 aa20.64■□□□□ 0.89
LSP1-203ENST00000405957 UPF3BQ9BZI7 483 aaKnown RBP20.64■□□□□ 0.89
LSP1-203ENST00000405957 A0A0D9SFI3 127 aa20.63■□□□□ 0.89
LSP1-203ENST00000405957 HSP90B1P14625 803 aaKnown RBP20.63■□□□□ 0.89
LSP1-203ENST00000405957 TIMM10P62072 90 aa20.63■□□□□ 0.89
LSP1-203ENST00000405957 SF3B2Q13435 895 aaKnown RBP20.63■□□□□ 0.89
LSP1-203ENST00000405957 RC3H1Q5TC82 1133 aaKnown RBP20.63■□□□□ 0.89
LSP1-203ENST00000405957 CLEC4GQ6UXB4 293 aa20.63■□□□□ 0.89
LSP1-203ENST00000405957 TTC14Q96N46 770 aa20.63■□□□□ 0.89
LSP1-203ENST00000405957 DNAJC2Q99543 621 aaKnown RBP20.63■□□□□ 0.89
LSP1-203ENST00000405957 COL24A1Q17RW2 1714 aa20.63■□□□□ 0.89
LSP1-203ENST00000405957 FSD2A1L4K1 749 aa20.62■□□□□ 0.89
LSP1-203ENST00000405957 EN1Q05925 392 aaPredicted RBP20.62■□□□□ 0.89
LSP1-203ENST00000405957 MAP4K1Q92918 833 aa20.62■□□□□ 0.89
LSP1-203ENST00000405957 EDC3Q96F86 508 aaKnown RBP20.62■□□□□ 0.89
LSP1-203ENST00000405957 RIPOR2Q9Y4F9 1068 aa20.62■□□□□ 0.89
LSP1-203ENST00000405957 NTSR2O95665 410 aa20.62■□□□□ 0.89
LSP1-203ENST00000405957 PSMA5P28066 241 aa20.62■□□□□ 0.89
LSP1-203ENST00000405957 PTH1RQ03431 593 aa20.62■□□□□ 0.89
LSP1-203ENST00000405957 NECTIN1Q15223 517 aa20.62■□□□□ 0.89
LSP1-203ENST00000405957 KLHL40Q2TBA0 621 aa20.62■□□□□ 0.89
LSP1-203ENST00000405957 VPS53Q5VIR6 699 aa20.62■□□□□ 0.89
LSP1-203ENST00000405957 KBTBD3Q8NAB2 608 aa20.62■□□□□ 0.89
LSP1-203ENST00000405957 HMG20BQ9P0W2 317 aa20.62■□□□□ 0.89
LSP1-203ENST00000405957 RTL9Q8NET4 1388 aa20.61■□□□□ 0.89
LSP1-203ENST00000405957 GNPATO15228 680 aa20.61■□□□□ 0.89
LSP1-203ENST00000405957 LDHAL6AQ6ZMR3 332 aa20.61■□□□□ 0.89
LSP1-203ENST00000405957 LIMCH1Q9UPQ0 1083 aa20.61■□□□□ 0.89
LSP1-203ENST00000405957 NIP7Q9Y221 180 aaKnown RBP eCLIP20.61■□□□□ 0.89
LSP1-203ENST00000405957 EZH2Q15910 746 aaKnown RBP20.6■□□□□ 0.89
LSP1-203ENST00000405957 METTL24Q5JXM2 366 aa20.6■□□□□ 0.89
LSP1-203ENST00000405957 ZSCAN31Q96LW9 406 aaPredicted RBP20.6■□□□□ 0.89
LSP1-203ENST00000405957 CAMKK2Q96RR4 588 aa20.6■□□□□ 0.89
LSP1-203ENST00000405957 PAG1Q9NWQ8 432 aa20.6■□□□□ 0.89
LSP1-203ENST00000405957 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.6■□□□□ 0.89
LSP1-203ENST00000405957 CYP46A1Q9Y6A2 500 aa20.6■□□□□ 0.89
LSP1-203ENST00000405957 IFIT1P09914 478 aaKnown RBP20.59■□□□□ 0.89
LSP1-203ENST00000405957 BAG6P46379 1132 aa20.59■□□□□ 0.89
LSP1-203ENST00000405957 KCNJ4P48050 445 aa20.59■□□□□ 0.89
LSP1-203ENST00000405957 SMIM5Q71RC9 77 aa20.59■□□□□ 0.89
LSP1-203ENST00000405957 RASEFQ8IZ41 740 aa20.59■□□□□ 0.89
LSP1-203ENST00000405957 ZSWIM6Q9HCJ5 1215 aa20.59■□□□□ 0.89
LSP1-203ENST00000405957 SH2B1Q9NRF2 756 aaPredicted RBP20.59■□□□□ 0.89
LSP1-203ENST00000405957 CNNM1Q9NRU3 951 aa20.59■□□□□ 0.89
LSP1-203ENST00000405957 MYH7P12883 1935 aa20.59■□□□□ 0.89
LSP1-203ENST00000405957 C4AP0C0L4 1744 aa20.59■□□□□ 0.89
LSP1-203ENST00000405957 RPS6KA4O75676 772 aa20.59■□□□□ 0.89
LSP1-203ENST00000405957 BRD1O95696 1058 aa20.59■□□□□ 0.89
LSP1-203ENST00000405957 CCDC158Q5M9N0 1113 aa20.59■□□□□ 0.89
LSP1-203ENST00000405957 DDX46Q7L014 1031 aaKnown RBP20.59■□□□□ 0.89
LSP1-203ENST00000405957 DEFB132Q7Z7B7 95 aa20.59■□□□□ 0.89
LSP1-203ENST00000405957 XAGE2Q96GT9 111 aa20.59■□□□□ 0.89
LSP1-203ENST00000405957 RBM8AQ9Y5S9 174 aaKnown RBP20.59■□□□□ 0.89
LSP1-203ENST00000405957 CASTP20810 708 aaKnown RBP20.58■□□□□ 0.89
LSP1-203ENST00000405957 ATP2B3Q16720 1220 aa20.58■□□□□ 0.89
LSP1-203ENST00000405957 PRPF40BQ6NWY9 871 aaKnown RBP20.58■□□□□ 0.89
LSP1-203ENST00000405957 AMIGO3Q86WK7 504 aa20.58■□□□□ 0.89
LSP1-203ENST00000405957 VGLL2Q8N8G2 317 aa20.58■□□□□ 0.89
LSP1-203ENST00000405957 NDUFB9Q9Y6M9 179 aa20.58■□□□□ 0.89
LSP1-203ENST00000405957 GOLIM4O00461 696 aa20.57■□□□□ 0.88
LSP1-203ENST00000405957 PDIA4P13667 645 aaKnown RBP20.57■□□□□ 0.88
LSP1-203ENST00000405957 GZF1Q9H116 711 aaPredicted RBP20.57■□□□□ 0.88
LSP1-203ENST00000405957 RTCBQ9Y3I0 505 aaKnown RBP20.57■□□□□ 0.88
LSP1-203ENST00000405957 UBR3Q6ZT12 1888 aa20.57■□□□□ 0.88
LSP1-203ENST00000405957 RPAP1Q9BWH6 1393 aaPredicted RBP20.57■□□□□ 0.88
LSP1-203ENST00000405957 HCLS1P14317 486 aaPredicted RBP20.57■□□□□ 0.88
LSP1-203ENST00000405957 ADORA1P30542 326 aa20.57■□□□□ 0.88
LSP1-203ENST00000405957 MRE11P49959 708 aa20.57■□□□□ 0.88
LSP1-203ENST00000405957 AK2P54819 239 aa20.57■□□□□ 0.88
LSP1-203ENST00000405957 KRT32Q14532 448 aa20.57■□□□□ 0.88
LSP1-203ENST00000405957 TSGA10IPQ3SY00 556 aa20.57■□□□□ 0.88
LSP1-203ENST00000405957 TTC39AQ5SRH9 613 aa20.57■□□□□ 0.88
LSP1-203ENST00000405957 GORABQ5T7V8 394 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms