RNA–Protein interactions for RNA: ENST00000405506.2

XRCC6-204, Transcript of X-ray repair cross complementing 6, humanhuman

TSL 5 BASIC

Gene XRCC6, Length 1,958 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-204ENST00000405506 LIMCH1Q9UPQ0 1083 aa12.5□□□□□ -0.41
XRCC6-204ENST00000405506 EYA2O00167 538 aa12.49□□□□□ -0.41
XRCC6-204ENST00000405506 KIAA1211Q6ZU35 1233 aa12.49□□□□□ -0.41
XRCC6-204ENST00000405506 AMIGO3Q86WK7 504 aa12.49□□□□□ -0.41
XRCC6-204ENST00000405506 TTLL11Q8NHH1 800 aa12.49□□□□□ -0.41
XRCC6-204ENST00000405506 DBNDD2Q9BQY9 259 aa12.49□□□□□ -0.41
XRCC6-204ENST00000405506 ZSWIM6Q9HCJ5 1215 aa12.49□□□□□ -0.41
XRCC6-204ENST00000405506 SPEF2Q9C093 1822 aa12.49□□□□□ -0.41
XRCC6-204ENST00000405506 C4AP0C0L4 1744 aa12.49□□□□□ -0.41
XRCC6-204ENST00000405506 C4BP0C0L5 1744 aa12.49□□□□□ -0.41
XRCC6-204ENST00000405506 RPAP1Q9BWH6 1393 aaPredicted RBP12.49□□□□□ -0.41
XRCC6-204ENST00000405506 FAM177BA6PVY3 158 aa12.49□□□□□ -0.41
XRCC6-204ENST00000405506 NCLP19338 710 aaKnown RBP12.49□□□□□ -0.41
XRCC6-204ENST00000405506 CTSWP56202 376 aa12.49□□□□□ -0.41
XRCC6-204ENST00000405506 NECTIN1Q15223 517 aa12.49□□□□□ -0.41
XRCC6-204ENST00000405506 VPS53Q5VIR6 699 aa12.49□□□□□ -0.41
XRCC6-204ENST00000405506 RUFY3Q7L099 469 aa12.49□□□□□ -0.41
XRCC6-204ENST00000405506 ANP32BQ92688 251 aaKnown RBP12.49□□□□□ -0.41
XRCC6-204ENST00000405506 GPATCH3Q96I76 525 aa12.49□□□□□ -0.41
XRCC6-204ENST00000405506 GREM2Q9H772 168 aa12.49□□□□□ -0.41
XRCC6-204ENST00000405506 ZNF609O15014 1411 aa12.48□□□□□ -0.41
XRCC6-204ENST00000405506 HIP1O00291 1037 aa12.48□□□□□ -0.41
XRCC6-204ENST00000405506 ALDH8A1Q9H2A2 487 aaPredicted RBP12.48□□□□□ -0.41
XRCC6-204ENST00000405506 BOLA2Q9H3K6 86 aa12.48□□□□□ -0.41
XRCC6-204ENST00000405506 RBM27Q9P2N5 1060 aaKnown RBP12.48□□□□□ -0.41
XRCC6-204ENST00000405506 CCNL1Q9UK58 526 aaPredicted RBP12.48□□□□□ -0.41
XRCC6-204ENST00000405506 COL4A1P02462 1669 aa12.48□□□□□ -0.41
XRCC6-204ENST00000405506 LRP5O75197 1615 aa12.48□□□□□ -0.41
XRCC6-204ENST00000405506 CIAO1O76071 339 aa12.47□□□□□ -0.41
XRCC6-204ENST00000405506 NTSR2O95665 410 aa12.47□□□□□ -0.41
XRCC6-204ENST00000405506 IL15P40933 162 aaPredicted RBP12.47□□□□□ -0.41
XRCC6-204ENST00000405506 AK2P54819 239 aa12.47□□□□□ -0.41
XRCC6-204ENST00000405506 CCDC57Q2TAC2 916 aa12.47□□□□□ -0.41
XRCC6-204ENST00000405506 CWC27Q6UX04 472 aaKnown RBP12.47□□□□□ -0.41
XRCC6-204ENST00000405506 ZSCAN30Q86W11 494 aa12.47□□□□□ -0.41
XRCC6-204ENST00000405506 CHAMP1Q96JM3 812 aa12.47□□□□□ -0.41
XRCC6-204ENST00000405506 ZSCAN31Q96LW9 406 aaPredicted RBP12.47□□□□□ -0.41
XRCC6-204ENST00000405506 BCL2L12Q9HB09 334 aa12.47□□□□□ -0.41
XRCC6-204ENST00000405506 EP400Q96L91 3159 aa12.47□□□□□ -0.41
XRCC6-204ENST00000405506 RIC1Q4ADV7 1423 aa12.47□□□□□ -0.41
XRCC6-204ENST00000405506 PDE8AO60658 829 aa12.47□□□□□ -0.41
XRCC6-204ENST00000405506 PDIA4P13667 645 aaKnown RBP12.47□□□□□ -0.41
XRCC6-204ENST00000405506 HCLS1P14317 486 aaPredicted RBP12.47□□□□□ -0.41
XRCC6-204ENST00000405506 RC3H1Q5TC82 1133 aaKnown RBP12.47□□□□□ -0.41
XRCC6-204ENST00000405506 MAP4K1Q92918 833 aa12.47□□□□□ -0.41
XRCC6-204ENST00000405506 EDC3Q96F86 508 aaKnown RBP12.47□□□□□ -0.41
XRCC6-204ENST00000405506 DIAPH3Q9NSV4 1193 aa12.47□□□□□ -0.41
XRCC6-204ENST00000405506 NIP7Q9Y221 180 aaKnown RBP eCLIP12.47□□□□□ -0.41
XRCC6-204ENST00000405506 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.47□□□□□ -0.41
XRCC6-204ENST00000405506 TCHHQ07283 1943 aa12.46□□□□□ -0.41
XRCC6-204ENST00000405506 ZSCAN22P10073 491 aaPredicted RBP12.46□□□□□ -0.41
XRCC6-204ENST00000405506 ITGA6P23229 1130 aa12.46□□□□□ -0.41
XRCC6-204ENST00000405506 TIMM10P62072 90 aa12.46□□□□□ -0.41
XRCC6-204ENST00000405506 PTH1RQ03431 593 aa12.46□□□□□ -0.41
XRCC6-204ENST00000405506 IFIT5Q13325 482 aaKnown RBP12.46□□□□□ -0.41
XRCC6-204ENST00000405506 SH2B1Q9NRF2 756 aaPredicted RBP12.46□□□□□ -0.41
XRCC6-204ENST00000405506 SRP68Q9UHB9 627 aaKnown RBP12.46□□□□□ -0.41
XRCC6-204ENST00000405506 NDUFB9Q9Y6M9 179 aa12.46□□□□□ -0.41
XRCC6-204ENST00000405506 COL24A1Q17RW2 1714 aa12.46□□□□□ -0.42
XRCC6-204ENST00000405506 SH3TC1Q8TE82 1336 aa12.46□□□□□ -0.42
XRCC6-204ENST00000405506 TAF1P21675 1872 aa12.45□□□□□ -0.42
XRCC6-204ENST00000405506 GNPATO15228 680 aa12.45□□□□□ -0.42
XRCC6-204ENST00000405506 RPS6KA4O75676 772 aa12.45□□□□□ -0.42
XRCC6-204ENST00000405506 ATP5JP18859 108 aa12.45□□□□□ -0.42
XRCC6-204ENST00000405506 TSGA10IPQ3SY00 556 aa12.45□□□□□ -0.42
XRCC6-204ENST00000405506 USP48Q86UV5 1035 aa12.45□□□□□ -0.42
XRCC6-204ENST00000405506 SYAP1Q96A49 352 aaPredicted RBP12.45□□□□□ -0.42
XRCC6-204ENST00000405506 UTP14AQ9BVJ6 771 aaKnown RBP12.45□□□□□ -0.42
XRCC6-204ENST00000405506 BCL11BQ9C0K0 894 aaPredicted RBP12.45□□□□□ -0.42
XRCC6-204ENST00000405506 GPR108Q9NPR9 543 aa12.45□□□□□ -0.42
XRCC6-204ENST00000405506 LRRC4BQ9NT99 713 aa12.45□□□□□ -0.42
XRCC6-204ENST00000405506 CCDC171Q6TFL3 1326 aa12.45□□□□□ -0.42
XRCC6-204ENST00000405506 PARP10Q53GL7 1025 aa12.45□□□□□ -0.42
XRCC6-204ENST00000405506 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.45□□□□□ -0.42
XRCC6-204ENST00000405506 RIPOR2Q9Y4F9 1068 aa12.45□□□□□ -0.42
XRCC6-204ENST00000405506 UBR3Q6ZT12 1888 aa12.45□□□□□ -0.42
XRCC6-204ENST00000405506 SYCE3A1L190 88 aa12.44□□□□□ -0.42
XRCC6-204ENST00000405506 STX6O43752 255 aa12.44□□□□□ -0.42
XRCC6-204ENST00000405506 SYT1P21579 422 aa12.44□□□□□ -0.42
XRCC6-204ENST00000405506 USPL1Q5W0Q7 1092 aa12.44□□□□□ -0.42
XRCC6-204ENST00000405506 KRT27Q7Z3Y8 459 aa12.44□□□□□ -0.42
XRCC6-204ENST00000405506 NEUROD6Q96NK8 337 aa12.44□□□□□ -0.42
XRCC6-204ENST00000405506 NOL7Q9UMY1 257 aaKnown RBP12.44□□□□□ -0.42
XRCC6-204ENST00000405506 A0A1B0GUL7 405 aa12.43□□□□□ -0.42
XRCC6-204ENST00000405506 ANKRD18BA2A2Z9 1011 aa12.43□□□□□ -0.42
XRCC6-204ENST00000405506 ADORA1P30542 326 aa12.43□□□□□ -0.42
XRCC6-204ENST00000405506 TAF7LQ5H9L4 462 aa12.43□□□□□ -0.42
XRCC6-204ENST00000405506 TBC1D9BQ66K14 1250 aa12.43□□□□□ -0.42
XRCC6-204ENST00000405506 CLEC4GQ6UXB4 293 aa12.43□□□□□ -0.42
XRCC6-204ENST00000405506 FBXO3Q9UK99 471 aa12.43□□□□□ -0.42
XRCC6-204ENST00000405506 A0A1B0GUL6 1792 aa12.43□□□□□ -0.42
XRCC6-204ENST00000405506 ZNF500O60304 480 aaPredicted RBP12.43□□□□□ -0.42
XRCC6-204ENST00000405506 GADD45BO75293 160 aaPredicted RBP12.43□□□□□ -0.42
XRCC6-204ENST00000405506 CHGBP05060 677 aa12.43□□□□□ -0.42
XRCC6-204ENST00000405506 CASTP20810 708 aaKnown RBP12.43□□□□□ -0.42
XRCC6-204ENST00000405506 MCM5P33992 734 aa12.43□□□□□ -0.42
XRCC6-204ENST00000405506 UVSSAQ2YD98 709 aa12.43□□□□□ -0.42
XRCC6-204ENST00000405506 FOXD4L5Q5VV16 416 aaPredicted RBP12.43□□□□□ -0.42
XRCC6-204ENST00000405506 NOL8Q76FK4 1167 aaKnown RBP12.43□□□□□ -0.42
XRCC6-204ENST00000405506 TICAM2Q86XR7 235 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms