RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 ARHGEF10O15013 1369 aa11.19□□□□□ -0.62
SMC1B-202ENST00000404354 DIP2BQ9P265 1576 aa11.19□□□□□ -0.62
SMC1B-202ENST00000404354 PTPDC1A2A3K4 754 aa11.19□□□□□ -0.62
SMC1B-202ENST00000404354 URI1O94763 535 aaPredicted RBP11.19□□□□□ -0.62
SMC1B-202ENST00000404354 HAND2P61296 217 aa11.19□□□□□ -0.62
SMC1B-202ENST00000404354 GNL2Q13823 731 aaKnown RBP11.19□□□□□ -0.62
SMC1B-202ENST00000404354 PLEKHG3A1L390 1219 aa11.18□□□□□ -0.62
SMC1B-202ENST00000404354 ATP5J2-PTCD1G3V325 749 aa11.18□□□□□ -0.62
SMC1B-202ENST00000404354 PTCD1O75127 700 aaKnown RBP11.18□□□□□ -0.62
SMC1B-202ENST00000404354 ATP1A3P13637 1013 aa11.18□□□□□ -0.62
SMC1B-202ENST00000404354 IRX5P78411 483 aaPredicted RBP11.18□□□□□ -0.62
SMC1B-202ENST00000404354 GABPB1Q06547 395 aaPredicted RBP11.18□□□□□ -0.62
SMC1B-202ENST00000404354 HSP90AB3PQ58FF7 597 aa11.18□□□□□ -0.62
SMC1B-202ENST00000404354 E4F1Q66K89 784 aaPredicted RBP11.18□□□□□ -0.62
SMC1B-202ENST00000404354 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.18□□□□□ -0.62
SMC1B-202ENST00000404354 CEP57L1Q8IYX8 460 aa11.18□□□□□ -0.62
SMC1B-202ENST00000404354 CCDC34Q96HJ3 373 aa11.18□□□□□ -0.62
SMC1B-202ENST00000404354 NOL10Q9BSC4 688 aaKnown RBP11.18□□□□□ -0.62
SMC1B-202ENST00000404354 CHMP4AQ9BY43 222 aa11.18□□□□□ -0.62
SMC1B-202ENST00000404354 OVOS2A0A0J9YW53 1432 aa11.18□□□□□ -0.62
SMC1B-202ENST00000404354 GRM8O00222 908 aa11.18□□□□□ -0.62
SMC1B-202ENST00000404354 EPB41L2O43491 1005 aaKnown RBP11.18□□□□□ -0.62
SMC1B-202ENST00000404354 OVOS2Q6IE36 1432 aa11.18□□□□□ -0.62
SMC1B-202ENST00000404354 NYAP1Q6ZVC0 841 aa11.18□□□□□ -0.62
SMC1B-202ENST00000404354 STOX1Q6ZVD7 989 aa11.18□□□□□ -0.62
SMC1B-202ENST00000404354 PREX1Q8TCU6 1659 aa11.18□□□□□ -0.62
SMC1B-202ENST00000404354 SBNO1A3KN83 1393 aa11.18□□□□□ -0.62
SMC1B-202ENST00000404354 PEAK1Q9H792 1746 aa11.18□□□□□ -0.62
SMC1B-202ENST00000404354 TFCP2Q12800 502 aa11.18□□□□□ -0.62
SMC1B-202ENST00000404354 TTLL5Q6EMB2 1281 aa11.18□□□□□ -0.62
SMC1B-202ENST00000404354 DBNDD2Q9BQY9 259 aa11.18□□□□□ -0.62
SMC1B-202ENST00000404354 MARCKSP29966 332 aaPredicted RBP11.17□□□□□ -0.62
SMC1B-202ENST00000404354 CLCN6P51797 869 aa11.17□□□□□ -0.62
SMC1B-202ENST00000404354 NDUFA8P51970 172 aa11.17□□□□□ -0.62
SMC1B-202ENST00000404354 ARMCX5Q6P1M9 558 aa11.17□□□□□ -0.62
SMC1B-202ENST00000404354 ERO1AQ96HE7 468 aa11.17□□□□□ -0.62
SMC1B-202ENST00000404354 ANO10Q9NW15 660 aa11.17□□□□□ -0.62
SMC1B-202ENST00000404354 DBF4Q9UBU7 674 aaPredicted RBP11.17□□□□□ -0.62
SMC1B-202ENST00000404354 SFPQP23246 707 aaKnown RBP eCLIP11.17□□□□□ -0.62
SMC1B-202ENST00000404354 NBPF11Q86T75 865 aa11.17□□□□□ -0.62
SMC1B-202ENST00000404354 COL15A1P39059 1388 aa11.17□□□□□ -0.62
SMC1B-202ENST00000404354 HTATSF1O43719 755 aaKnown RBP11.17□□□□□ -0.62
SMC1B-202ENST00000404354 RBM43Q6ZSC3 357 aaKnown RBP11.17□□□□□ -0.62
SMC1B-202ENST00000404354 PPP1R13BQ96KQ4 1090 aa11.17□□□□□ -0.62
SMC1B-202ENST00000404354 MYD88Q99836 296 aa11.17□□□□□ -0.62
SMC1B-202ENST00000404354 DBNLQ9UJU6 430 aaKnown RBP11.17□□□□□ -0.62
SMC1B-202ENST00000404354 PCDHA7Q9UN72 937 aa11.17□□□□□ -0.62
SMC1B-202ENST00000404354 ERBB3P21860 1342 aa11.17□□□□□ -0.62
SMC1B-202ENST00000404354 GOLIM4O00461 696 aa11.16□□□□□ -0.62
SMC1B-202ENST00000404354 CTDNEP1O95476 244 aa11.16□□□□□ -0.62
SMC1B-202ENST00000404354 ADD1P35611 737 aaKnown RBP11.16□□□□□ -0.62
SMC1B-202ENST00000404354 STK38Q15208 465 aa11.16□□□□□ -0.62
SMC1B-202ENST00000404354 KSR2Q6VAB6 950 aa11.16□□□□□ -0.62
SMC1B-202ENST00000404354 ERC1Q8IUD2 1116 aa11.16□□□□□ -0.62
SMC1B-202ENST00000404354 MRFAP1L1Q96HT8 127 aa11.16□□□□□ -0.62
SMC1B-202ENST00000404354 CLIC4Q9Y696 253 aa11.16□□□□□ -0.62
SMC1B-202ENST00000404354 TSPOAP1O95153 1857 aa11.16□□□□□ -0.62
SMC1B-202ENST00000404354 HNRNPH2P55795 449 aaKnown RBP11.16□□□□□ -0.62
SMC1B-202ENST00000404354 PDILTQ8N807 584 aa11.16□□□□□ -0.62
SMC1B-202ENST00000404354 NSUN7Q8NE18 718 aaKnown RBP11.16□□□□□ -0.62
SMC1B-202ENST00000404354 TIGD1Q96MW7 591 aa11.16□□□□□ -0.62
SMC1B-202ENST00000404354 UTP14AQ9BVJ6 771 aaKnown RBP11.16□□□□□ -0.62
SMC1B-202ENST00000404354 CARD6Q9BX69 1037 aa11.16□□□□□ -0.62
SMC1B-202ENST00000404354 TIMM10P62072 90 aa11.15□□□□□ -0.62
SMC1B-202ENST00000404354 MNS1Q8NEH6 495 aa11.15□□□□□ -0.62
SMC1B-202ENST00000404354 UBXN4Q92575 508 aa11.15□□□□□ -0.62
SMC1B-202ENST00000404354 KCNB2Q92953 911 aa11.15□□□□□ -0.62
SMC1B-202ENST00000404354 SNRKQ9NRH2 765 aa11.15□□□□□ -0.62
SMC1B-202ENST00000404354 NPHP4O75161 1426 aaPredicted RBP11.15□□□□□ -0.62
SMC1B-202ENST00000404354 KDRP35968 1356 aa11.15□□□□□ -0.62
SMC1B-202ENST00000404354 RXRAP19793 462 aa11.15□□□□□ -0.62
SMC1B-202ENST00000404354 FAM160A1Q05DH4 1040 aa11.15□□□□□ -0.62
SMC1B-202ENST00000404354 SKIDA1Q1XH10 827 aa11.15□□□□□ -0.62
SMC1B-202ENST00000404354 UBE3BQ7Z3V4 1068 aa11.15□□□□□ -0.62
SMC1B-202ENST00000404354 CCDC66A2RUB6 948 aa11.15□□□□□ -0.63
SMC1B-202ENST00000404354 HIP1O00291 1037 aa11.15□□□□□ -0.63
SMC1B-202ENST00000404354 HDGFP51858 240 aaKnown RBP11.15□□□□□ -0.63
SMC1B-202ENST00000404354 DPF2Q92785 391 aa11.15□□□□□ -0.63
SMC1B-202ENST00000404354 CCDC85AQ96PX6 553 aaPredicted RBP11.15□□□□□ -0.63
SMC1B-202ENST00000404354 NEO1Q92859 1461 aa11.15□□□□□ -0.63
SMC1B-202ENST00000404354 ST5P78524 1137 aa11.14□□□□□ -0.63
SMC1B-202ENST00000404354 CERS3Q8IU89 383 aa11.14□□□□□ -0.63
SMC1B-202ENST00000404354 SERPINC1P01008 464 aa11.14□□□□□ -0.63
SMC1B-202ENST00000404354 IGKV5-2P06315 115 aa11.14□□□□□ -0.63
SMC1B-202ENST00000404354 CFAP100Q494V2 611 aa11.14□□□□□ -0.63
SMC1B-202ENST00000404354 ZSCAN16Q9H4T2 348 aaPredicted RBP11.14□□□□□ -0.63
SMC1B-202ENST00000404354 RCOR1Q9UKL0 485 aa11.14□□□□□ -0.63
SMC1B-202ENST00000404354 PNMA6AP0CW24 399 aaPredicted RBP11.14□□□□□ -0.63
SMC1B-202ENST00000404354 SPECC1Q5M775 1068 aa11.14□□□□□ -0.63
SMC1B-202ENST00000404354 TEX35Q5T0J7 233 aa11.14□□□□□ -0.63
SMC1B-202ENST00000404354 COPS6Q7L5N1 327 aa11.14□□□□□ -0.63
SMC1B-202ENST00000404354 ILDR1Q86SU0 546 aaPredicted RBP11.14□□□□□ -0.63
SMC1B-202ENST00000404354 GIGYF1O75420 1035 aaPredicted RBP11.13□□□□□ -0.63
SMC1B-202ENST00000404354 BMS1Q14692 1282 aaKnown RBP11.13□□□□□ -0.63
SMC1B-202ENST00000404354 SYCP1Q15431 976 aa11.13□□□□□ -0.63
SMC1B-202ENST00000404354 C1orf141Q5JVX7 400 aa11.13□□□□□ -0.63
SMC1B-202ENST00000404354 MRPS27Q92552 414 aaKnown RBP11.13□□□□□ -0.63
SMC1B-202ENST00000404354 AIFM3Q96NN9 605 aa11.13□□□□□ -0.63
SMC1B-202ENST00000404354 NAT10Q9H0A0 1025 aaKnown RBP11.13□□□□□ -0.63
SMC1B-202ENST00000404354 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms