RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.12■□□□□ 0.17
CEACAM1-206ENST00000403136 EDC3Q96F86 508 aaKnown RBP16.12■□□□□ 0.17
CEACAM1-206ENST00000403136 EP400Q96L91 3159 aa16.12■□□□□ 0.17
CEACAM1-206ENST00000403136 CDC5LQ99459 802 aaKnown RBP16.12■□□□□ 0.17
CEACAM1-206ENST00000403136 FSD1Q9BTV5 496 aa16.12■□□□□ 0.17
CEACAM1-206ENST00000403136 ANO2Q9NQ90 1003 aa16.12■□□□□ 0.17
CEACAM1-206ENST00000403136 RIC1Q4ADV7 1423 aa16.11■□□□□ 0.17
CEACAM1-206ENST00000403136 GYS1P13807 737 aa16.11■□□□□ 0.17
CEACAM1-206ENST00000403136 DNAJC2Q99543 621 aaKnown RBP16.11■□□□□ 0.17
CEACAM1-206ENST00000403136 IFIT1P09914 478 aaKnown RBP16.1■□□□□ 0.17
CEACAM1-206ENST00000403136 HELBQ8NG08 1087 aaPredicted RBP16.1■□□□□ 0.17
CEACAM1-206ENST00000403136 TBC1D2Q9BYX2 928 aa16.1■□□□□ 0.17
CEACAM1-206ENST00000403136 NDUFB9Q9Y6M9 179 aa16.1■□□□□ 0.17
CEACAM1-206ENST00000403136 ABCC12Q96J65 1359 aa16.1■□□□□ 0.17
CEACAM1-206ENST00000403136 DDX60Q8IY21 1712 aaKnown RBP16.1■□□□□ 0.17
CEACAM1-206ENST00000403136 TTC39AQ5SRH9 613 aa16.1■□□□□ 0.17
CEACAM1-206ENST00000403136 CARMIL3Q8ND23 1372 aa16.09■□□□□ 0.17
CEACAM1-206ENST00000403136 FGFR2P21802 821 aa16.09■□□□□ 0.17
CEACAM1-206ENST00000403136 TM4SF1P30408 202 aa16.09■□□□□ 0.17
CEACAM1-206ENST00000403136 PUM3Q15397 648 aaKnown RBP16.09■□□□□ 0.17
CEACAM1-206ENST00000403136 KIAA1211Q6ZU35 1233 aa16.09■□□□□ 0.17
CEACAM1-206ENST00000403136 ERICH6Q7L0X2 663 aa16.09■□□□□ 0.17
CEACAM1-206ENST00000403136 ANKRD18AQ8IVF6 992 aa16.09■□□□□ 0.17
CEACAM1-206ENST00000403136 CCDC24Q8N4L8 307 aa16.09■□□□□ 0.17
CEACAM1-206ENST00000403136 LPIN2Q92539 896 aa16.09■□□□□ 0.17
CEACAM1-206ENST00000403136 AKT1S1Q96B36 256 aa16.09■□□□□ 0.17
CEACAM1-206ENST00000403136 TFCP2L1Q9NZI6 479 aa16.09■□□□□ 0.17
CEACAM1-206ENST00000403136 NPHP1O15259 732 aa16.08■□□□□ 0.17
CEACAM1-206ENST00000403136 MCCP23508 829 aa16.08■□□□□ 0.17
CEACAM1-206ENST00000403136 NMIQ13287 307 aaPredicted RBP16.08■□□□□ 0.17
CEACAM1-206ENST00000403136 TICAM2Q86XR7 235 aa16.08■□□□□ 0.17
CEACAM1-206ENST00000403136 KBTBD3Q8NAB2 608 aa16.08■□□□□ 0.17
CEACAM1-206ENST00000403136 SNX21Q969T3 373 aa16.08■□□□□ 0.17
CEACAM1-206ENST00000403136 LSG1Q9H089 658 aaKnown RBP16.08■□□□□ 0.17
CEACAM1-206ENST00000403136 BSDC1Q9NW68 430 aaPredicted RBP16.08■□□□□ 0.17
CEACAM1-206ENST00000403136 PAG1Q9NWQ8 432 aa16.08■□□□□ 0.17
CEACAM1-206ENST00000403136 GOLIM4O00461 696 aa16.08■□□□□ 0.16
CEACAM1-206ENST00000403136 TAF5LO75529 589 aa16.08■□□□□ 0.16
CEACAM1-206ENST00000403136 RABEP1Q15276 862 aa16.08■□□□□ 0.16
CEACAM1-206ENST00000403136 DDX46Q7L014 1031 aaKnown RBP16.08■□□□□ 0.16
CEACAM1-206ENST00000403136 ZNF512BQ96KM6 892 aaPredicted RBP16.08■□□□□ 0.16
CEACAM1-206ENST00000403136 FAM227BQ96M60 508 aa16.08■□□□□ 0.16
CEACAM1-206ENST00000403136 CHRNDQ07001 517 aa16.07■□□□□ 0.16
CEACAM1-206ENST00000403136 ZNF827Q17R98 1081 aa16.07■□□□□ 0.16
CEACAM1-206ENST00000403136 CNBD1Q8NA66 436 aa16.07■□□□□ 0.16
CEACAM1-206ENST00000403136 SNRKQ9NRH2 765 aa16.07■□□□□ 0.16
CEACAM1-206ENST00000403136 UBR3Q6ZT12 1888 aa16.07■□□□□ 0.16
CEACAM1-206ENST00000403136 AK9Q5TCS8 1911 aa16.06■□□□□ 0.16
CEACAM1-206ENST00000403136 SERPINB2P05120 415 aa16.06■□□□□ 0.16
CEACAM1-206ENST00000403136 SLC5A1P13866 664 aa16.06■□□□□ 0.16
CEACAM1-206ENST00000403136 RPS8P62241 208 aaKnown RBP16.06■□□□□ 0.16
CEACAM1-206ENST00000403136 CELF1Q92879 486 aaKnown RBP16.06■□□□□ 0.16
CEACAM1-206ENST00000403136 RFX7Q2KHR2 1363 aa16.06■□□□□ 0.16
CEACAM1-206ENST00000403136 LAMB2P55268 1798 aa16.06■□□□□ 0.16
CEACAM1-206ENST00000403136 LRP5O75197 1615 aa16.06■□□□□ 0.16
CEACAM1-206ENST00000403136 RAD50Q92878 1312 aa16.06■□□□□ 0.16
CEACAM1-206ENST00000403136 C4AP0C0L4 1744 aa16.06■□□□□ 0.16
CEACAM1-206ENST00000403136 HSPA4P34932 840 aa16.05■□□□□ 0.16
CEACAM1-206ENST00000403136 ANAPC15P60006 121 aa16.05■□□□□ 0.16
CEACAM1-206ENST00000403136 FKBP4Q02790 459 aaKnown RBP eCLIP16.05■□□□□ 0.16
CEACAM1-206ENST00000403136 PRR5LQ6MZQ0 368 aa16.05■□□□□ 0.16
CEACAM1-206ENST00000403136 FLAD1Q8NFF5 587 aa16.05■□□□□ 0.16
CEACAM1-206ENST00000403136 COL24A1Q17RW2 1714 aa16.05■□□□□ 0.16
CEACAM1-206ENST00000403136 A0A0D9SFI3 127 aa16.05■□□□□ 0.16
CEACAM1-206ENST00000403136 SNAP23O00161 211 aa16.05■□□□□ 0.16
CEACAM1-206ENST00000403136 SCARF1Q14162 830 aa16.05■□□□□ 0.16
CEACAM1-206ENST00000403136 CCDC102BQ68D86 513 aa16.05■□□□□ 0.16
CEACAM1-206ENST00000403136 COL23A1Q86Y22 540 aaPredicted RBP16.05■□□□□ 0.16
CEACAM1-206ENST00000403136 HSCBQ8IWL3 235 aa16.05■□□□□ 0.16
CEACAM1-206ENST00000403136 MINPP1Q9UNW1 487 aa16.05■□□□□ 0.16
CEACAM1-206ENST00000403136 IL17RAQ96F46 866 aa16.04■□□□□ 0.16
CEACAM1-206ENST00000403136 ANTXR1Q9H6X2 564 aa16.04■□□□□ 0.16
CEACAM1-206ENST00000403136 UQCRFS1P1P0C7P4 283 aa16.03■□□□□ 0.16
CEACAM1-206ENST00000403136 ZAP70P43403 619 aa16.03■□□□□ 0.16
CEACAM1-206ENST00000403136 PHKA1P46020 1223 aa16.03■□□□□ 0.16
CEACAM1-206ENST00000403136 PTH1RQ03431 593 aa16.03■□□□□ 0.16
CEACAM1-206ENST00000403136 NLGN1Q8N2Q7 840 aa16.03■□□□□ 0.16
CEACAM1-206ENST00000403136 PALD1Q9ULE6 856 aa16.03■□□□□ 0.16
CEACAM1-206ENST00000403136 ARID4AP29374 1257 aaPredicted RBP16.03■□□□□ 0.16
CEACAM1-206ENST00000403136 MCAMP43121 646 aa16.03■□□□□ 0.16
CEACAM1-206ENST00000403136 POLRMTO00411 1230 aaKnown RBP16.02■□□□□ 0.15
CEACAM1-206ENST00000403136 RNF113AO15541 343 aaKnown RBP16.02■□□□□ 0.15
CEACAM1-206ENST00000403136 CHGBP05060 677 aa16.02■□□□□ 0.15
CEACAM1-206ENST00000403136 ST5P78524 1137 aa16.02■□□□□ 0.15
CEACAM1-206ENST00000403136 DDR1Q08345 913 aa16.02■□□□□ 0.15
CEACAM1-206ENST00000403136 UBE4AQ14139 1066 aa16.02■□□□□ 0.15
CEACAM1-206ENST00000403136 LRRFIP1Q32MZ4 808 aaKnown RBP16.02■□□□□ 0.15
CEACAM1-206ENST00000403136 MCMDC2Q4G0Z9 681 aa16.02■□□□□ 0.15
CEACAM1-206ENST00000403136 MAP4K1Q92918 833 aa16.02■□□□□ 0.15
CEACAM1-206ENST00000403136 CAMKK2Q96RR4 588 aa16.02■□□□□ 0.15
CEACAM1-206ENST00000403136 CCDC171Q6TFL3 1326 aa16.02■□□□□ 0.15
CEACAM1-206ENST00000403136 MED23Q9ULK4 1368 aa16.01■□□□□ 0.15
CEACAM1-206ENST00000403136 CD2BP2O95400 341 aaKnown RBP16.01■□□□□ 0.15
CEACAM1-206ENST00000403136 PI16Q6UXB8 463 aa16.01■□□□□ 0.15
CEACAM1-206ENST00000403136 HELLSQ9NRZ9 838 aa16.01■□□□□ 0.15
CEACAM1-206ENST00000403136 EN1Q05925 392 aaPredicted RBP16■□□□□ 0.15
CEACAM1-206ENST00000403136 EZH2Q15910 746 aaKnown RBP16■□□□□ 0.15
CEACAM1-206ENST00000403136 ZMYM1Q5SVZ6 1142 aa16■□□□□ 0.15
CEACAM1-206ENST00000403136 ZNF589Q86UQ0 364 aaPredicted RBP16■□□□□ 0.15
CEACAM1-206ENST00000403136 SEC62Q99442 399 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms