RNA–Protein interactions for RNA: ENST00000402383.3

VIM2P-201, Transcript of vimentin 2, pseudogene, humanhuman

BASIC

Gene VIM2P, Length 1,294 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM2P-201ENST00000402383 C21orf2O43822 256 aa8.62□□□□□ -1.03
VIM2P-201ENST00000402383 NTSR2O95665 410 aa8.62□□□□□ -1.03
VIM2P-201ENST00000402383 PIP4K2AP48426 406 aaPredicted RBP8.62□□□□□ -1.03
VIM2P-201ENST00000402383 BRPF1P55201 1214 aaPredicted RBP8.62□□□□□ -1.03
VIM2P-201ENST00000402383 RASSF7Q02833 373 aa8.62□□□□□ -1.03
VIM2P-201ENST00000402383 TRIM28Q13263 835 aaKnown RBP8.62□□□□□ -1.03
VIM2P-201ENST00000402383 CCDC93Q567U6 631 aa8.62□□□□□ -1.03
VIM2P-201ENST00000402383 HSP90AB3PQ58FF7 597 aa8.62□□□□□ -1.03
VIM2P-201ENST00000402383 KIF6Q6ZMV9 814 aa8.62□□□□□ -1.03
VIM2P-201ENST00000402383 TTLL7Q6ZT98 887 aa8.62□□□□□ -1.03
VIM2P-201ENST00000402383 NPDC1Q9NQX5 325 aaPredicted RBP8.62□□□□□ -1.03
VIM2P-201ENST00000402383 ABCC12Q96J65 1359 aa8.61□□□□□ -1.03
VIM2P-201ENST00000402383 FKBP4Q02790 459 aaKnown RBP eCLIP8.61□□□□□ -1.03
VIM2P-201ENST00000402383 CCDC27Q2M243 656 aa8.61□□□□□ -1.03
VIM2P-201ENST00000402383 ZNF526Q8TF50 670 aaPredicted RBP8.61□□□□□ -1.03
VIM2P-201ENST00000402383 ZNF622Q969S3 477 aaKnown RBP eCLIP8.61□□□□□ -1.03
VIM2P-201ENST00000402383 CCDC102AQ96A19 550 aa8.61□□□□□ -1.03
VIM2P-201ENST00000402383 CHMP4AQ9BY43 222 aa8.61□□□□□ -1.03
VIM2P-201ENST00000402383 ZNF330Q9Y3S2 320 aaPredicted RBP8.61□□□□□ -1.03
VIM2P-201ENST00000402383 LTBP1Q14766 1721 aa8.6□□□□□ -1.03
VIM2P-201ENST00000402383 FZD9O00144 591 aa8.6□□□□□ -1.03
VIM2P-201ENST00000402383 IRF6O14896 467 aa8.6□□□□□ -1.03
VIM2P-201ENST00000402383 CALD1Q05682 793 aaKnown RBP8.6□□□□□ -1.03
VIM2P-201ENST00000402383 WDR43Q15061 677 aaKnown RBP eCLIP8.6□□□□□ -1.03
VIM2P-201ENST00000402383 ERFEQ4G0M1 354 aa8.6□□□□□ -1.03
VIM2P-201ENST00000402383 PPP1R42Q7Z4L9 355 aa8.6□□□□□ -1.03
VIM2P-201ENST00000402383 JMYQ8N9B5 988 aa8.6□□□□□ -1.03
VIM2P-201ENST00000402383 SMC1BQ8NDV3 1235 aa8.6□□□□□ -1.03
VIM2P-201ENST00000402383 RRAGCQ9HB90 399 aa8.6□□□□□ -1.03
VIM2P-201ENST00000402383 IFT57Q9NWB7 429 aa8.6□□□□□ -1.03
VIM2P-201ENST00000402383 DBF4Q9UBU7 674 aaPredicted RBP8.6□□□□□ -1.03
VIM2P-201ENST00000402383 RRP7AQ9Y3A4 280 aaKnown RBP8.6□□□□□ -1.03
VIM2P-201ENST00000402383 MYH3P11055 1940 aa8.6□□□□□ -1.03
VIM2P-201ENST00000402383 TRIM66O15016 1216 aa8.59□□□□□ -1.03
VIM2P-201ENST00000402383 TCIRG1Q13488 830 aa8.59□□□□□ -1.03
VIM2P-201ENST00000402383 SUSD4Q5VX71 490 aa8.59□□□□□ -1.03
VIM2P-201ENST00000402383 DIEXFQ68CQ4 756 aaKnown RBP8.59□□□□□ -1.03
VIM2P-201ENST00000402383 RTFDC1Q9BY42 306 aaPredicted RBP8.59□□□□□ -1.03
VIM2P-201ENST00000402383 TAF1P21675 1872 aa8.59□□□□□ -1.03
VIM2P-201ENST00000402383 BBOX1O75936 387 aa8.58□□□□□ -1.04
VIM2P-201ENST00000402383 GNAI1P63096 354 aa8.58□□□□□ -1.04
VIM2P-201ENST00000402383 PROSER3Q2NL68 480 aa8.58□□□□□ -1.04
VIM2P-201ENST00000402383 COPS6Q7L5N1 327 aa8.58□□□□□ -1.04
VIM2P-201ENST00000402383 TMC4Q7Z404 712 aa8.58□□□□□ -1.04
VIM2P-201ENST00000402383 NLRP10Q86W26 655 aa8.58□□□□□ -1.04
VIM2P-201ENST00000402383 C16orf71Q8IYS4 520 aaPredicted RBP8.58□□□□□ -1.04
VIM2P-201ENST00000402383 CCDC24Q8N4L8 307 aa8.58□□□□□ -1.04
VIM2P-201ENST00000402383 PLBD2Q8NHP8 589 aa8.58□□□□□ -1.04
VIM2P-201ENST00000402383 ISCA1Q9BUE6 129 aa8.58□□□□□ -1.04
VIM2P-201ENST00000402383 UTP14AQ9BVJ6 771 aaKnown RBP8.58□□□□□ -1.04
VIM2P-201ENST00000402383 HYPKQ9NX55 129 aa8.58□□□□□ -1.04
VIM2P-201ENST00000402383 PSME4Q14997 1843 aa8.58□□□□□ -1.04
VIM2P-201ENST00000402383 TRPM7Q96QT4 1865 aa8.57□□□□□ -1.04
VIM2P-201ENST00000402383 COL4A5P29400 1685 aa8.57□□□□□ -1.04
VIM2P-201ENST00000402383 IQCA1LA6NCM1 817 aa8.57□□□□□ -1.04
VIM2P-201ENST00000402383 NPHP1O15259 732 aa8.57□□□□□ -1.04
VIM2P-201ENST00000402383 MYL6BP14649 208 aa8.57□□□□□ -1.04
VIM2P-201ENST00000402383 IARSP41252 1262 aaKnown RBP8.57□□□□□ -1.04
VIM2P-201ENST00000402383 ANKRD13DQ6ZTN6 518 aa8.57□□□□□ -1.04
VIM2P-201ENST00000402383 GPC2Q8N158 579 aa8.57□□□□□ -1.04
VIM2P-201ENST00000402383 RBM17Q96I25 401 aaKnown RBP8.57□□□□□ -1.04
VIM2P-201ENST00000402383 NLRP3Q96P20 1036 aa8.57□□□□□ -1.04
VIM2P-201ENST00000402383 ZBTB3Q9H5J0 574 aa8.57□□□□□ -1.04
VIM2P-201ENST00000402383 ATP6V0A2Q9Y487 856 aa8.57□□□□□ -1.04
VIM2P-201ENST00000402383 IL16Q14005 1332 aa8.56□□□□□ -1.04
VIM2P-201ENST00000402383 ST18O60284 1047 aa8.56□□□□□ -1.04
VIM2P-201ENST00000402383 EIF2S2P20042 333 aaKnown RBP8.56□□□□□ -1.04
VIM2P-201ENST00000402383 PTPREP23469 700 aa8.56□□□□□ -1.04
VIM2P-201ENST00000402383 GTF2E1P29083 439 aaPredicted RBP8.56□□□□□ -1.04
VIM2P-201ENST00000402383 PDE4DQ08499 809 aa8.56□□□□□ -1.04
VIM2P-201ENST00000402383 SF3B3Q15393 1217 aaKnown RBP8.56□□□□□ -1.04
VIM2P-201ENST00000402383 PADI6Q6TGC4 694 aa8.56□□□□□ -1.04
VIM2P-201ENST00000402383 NUTM1Q86Y26 1132 aa8.56□□□□□ -1.04
VIM2P-201ENST00000402383 CCDC146Q8IYE0 955 aa8.56□□□□□ -1.04
VIM2P-201ENST00000402383 NGEFQ8N5V2 710 aa8.56□□□□□ -1.04
VIM2P-201ENST00000402383 XAGE3Q8WTP9 111 aa8.56□□□□□ -1.04
VIM2P-201ENST00000402383 KLRG1Q96E93 195 aa8.56□□□□□ -1.04
VIM2P-201ENST00000402383 MBIPQ9NS73 344 aa8.56□□□□□ -1.04
VIM2P-201ENST00000402383 DUOX1Q9NRD9 1551 aa8.56□□□□□ -1.04
VIM2P-201ENST00000402383 SH3TC1Q8TE82 1336 aa8.55□□□□□ -1.04
VIM2P-201ENST00000402383 PASKQ96RG2 1323 aa8.55□□□□□ -1.04
VIM2P-201ENST00000402383 APAF1O14727 1248 aa8.55□□□□□ -1.04
VIM2P-201ENST00000402383 GPTP24298 496 aa8.55□□□□□ -1.04
VIM2P-201ENST00000402383 HDGFL1Q5TGJ6 251 aa8.55□□□□□ -1.04
VIM2P-201ENST00000402383 DUSP27Q5VZP5 1158 aa8.55□□□□□ -1.04
VIM2P-201ENST00000402383 LDHDQ86WU2 507 aa8.55□□□□□ -1.04
VIM2P-201ENST00000402383 SP8Q8IXZ3 490 aa8.55□□□□□ -1.04
VIM2P-201ENST00000402383 SYNE4Q8N205 404 aa8.55□□□□□ -1.04
VIM2P-201ENST00000402383 RPGRQ92834 1020 aaKnown RBP8.55□□□□□ -1.04
VIM2P-201ENST00000402383 TAF1DQ9H5J8 278 aaPredicted RBP8.55□□□□□ -1.04
VIM2P-201ENST00000402383 CHPF2Q9P2E5 772 aa8.55□□□□□ -1.04
VIM2P-201ENST00000402383 ABCC4O15439 1325 aa8.54□□□□□ -1.04
VIM2P-201ENST00000402383 CDHR2Q9BYE9 1310 aa8.54□□□□□ -1.04
VIM2P-201ENST00000402383 ZNF609O15014 1411 aa8.54□□□□□ -1.04
VIM2P-201ENST00000402383 DDNO94850 711 aaPredicted RBP8.54□□□□□ -1.04
VIM2P-201ENST00000402383 HSP90B1P14625 803 aaKnown RBP8.54□□□□□ -1.04
VIM2P-201ENST00000402383 COL9A1P20849 921 aa8.54□□□□□ -1.04
VIM2P-201ENST00000402383 EMP3P54852 163 aa8.54□□□□□ -1.04
VIM2P-201ENST00000402383 KRT24Q2M2I5 525 aa8.54□□□□□ -1.04
VIM2P-201ENST00000402383 FAM161AQ3B820 660 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms