RNA–Protein interactions for RNA: ENST00000402340.2

FAM47DP-201, Transcript of family with sequence similarity 47 member D, pseudogene, humanhuman

BASIC

Gene FAM47DP, Length 3,290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM47DP-201ENST00000402340 SALL1Q9NSC2 1324 aa14.69□□□□□ -0.06
FAM47DP-201ENST00000402340 DMTNQ08495 405 aa14.69□□□□□ -0.06
FAM47DP-201ENST00000402340 LRMPQ12912 555 aa14.69□□□□□ -0.06
FAM47DP-201ENST00000402340 MRFAP1L1Q96HT8 127 aa14.69□□□□□ -0.06
FAM47DP-201ENST00000402340 CTAGE5O15320 804 aa14.68□□□□□ -0.06
FAM47DP-201ENST00000402340 HMGB1P09429 215 aaKnown RBP14.68□□□□□ -0.06
FAM47DP-201ENST00000402340 ATP2B3Q16720 1220 aa14.68□□□□□ -0.06
FAM47DP-201ENST00000402340 XAGE3Q8WTP9 111 aa14.68□□□□□ -0.06
FAM47DP-201ENST00000402340 SMTNL1A8MU46 457 aa14.68□□□□□ -0.06
FAM47DP-201ENST00000402340 CASP7P55210 303 aa14.68□□□□□ -0.06
FAM47DP-201ENST00000402340 RBM6P78332 1123 aaKnown RBP14.68□□□□□ -0.06
FAM47DP-201ENST00000402340 TFCP2Q12800 502 aa14.68□□□□□ -0.06
FAM47DP-201ENST00000402340 PPP4R3BQ5MIZ7 849 aa14.68□□□□□ -0.06
FAM47DP-201ENST00000402340 TRIM5Q9C035 493 aa14.68□□□□□ -0.06
FAM47DP-201ENST00000402340 DNAJC25Q9H1X3 360 aa14.68□□□□□ -0.06
FAM47DP-201ENST00000402340 LAMA4Q16363 1823 aa14.68□□□□□ -0.06
FAM47DP-201ENST00000402340 ZNF142P52746 1687 aaPredicted RBP14.68□□□□□ -0.06
FAM47DP-201ENST00000402340 EXOSC10Q01780 885 aaKnown RBP14.68□□□□□ -0.06
FAM47DP-201ENST00000402340 SNW1Q13573 536 aaKnown RBP14.68□□□□□ -0.06
FAM47DP-201ENST00000402340 STOX1Q6ZVD7 989 aa14.68□□□□□ -0.06
FAM47DP-201ENST00000402340 NSUN7Q8NE18 718 aaKnown RBP14.68□□□□□ -0.06
FAM47DP-201ENST00000402340 GLI3P10071 1580 aa14.68□□□□□ -0.06
FAM47DP-201ENST00000402340 FAM177BA6PVY3 158 aa14.67□□□□□ -0.06
FAM47DP-201ENST00000402340 CTDNEP1O95476 244 aa14.67□□□□□ -0.06
FAM47DP-201ENST00000402340 COPS6Q7L5N1 327 aa14.67□□□□□ -0.06
FAM47DP-201ENST00000402340 PDCL2Q8N4E4 241 aa14.67□□□□□ -0.06
FAM47DP-201ENST00000402340 ENGASEQ8NFI3 743 aa14.67□□□□□ -0.06
FAM47DP-201ENST00000402340 BICD2Q8TD16 824 aa14.67□□□□□ -0.06
FAM47DP-201ENST00000402340 CACTINQ8WUQ7 758 aaKnown RBP14.67□□□□□ -0.06
FAM47DP-201ENST00000402340 KCND1Q9NSA2 647 aa14.67□□□□□ -0.06
FAM47DP-201ENST00000402340 ERBB3P21860 1342 aa14.67□□□□□ -0.06
FAM47DP-201ENST00000402340 CCDC144BQ3MJ40 725 aa14.67□□□□□ -0.06
FAM47DP-201ENST00000402340 CCDC144CPQ8IYA2 1237 aa14.67□□□□□ -0.06
FAM47DP-201ENST00000402340 FBXL16Q8N461 479 aa14.67□□□□□ -0.06
FAM47DP-201ENST00000402340 MYD88Q99836 296 aa14.67□□□□□ -0.06
FAM47DP-201ENST00000402340 PAXBP1Q9Y5B6 917 aa14.67□□□□□ -0.06
FAM47DP-201ENST00000402340 ARFGEF2Q9Y6D5 1785 aa14.67□□□□□ -0.06
FAM47DP-201ENST00000402340 KBTBD3Q8NAB2 608 aa14.67□□□□□ -0.06
FAM47DP-201ENST00000402340 NCBP1Q09161 790 aaKnown RBP14.66□□□□□ -0.06
FAM47DP-201ENST00000402340 ANKRD13DQ6ZTN6 518 aa14.66□□□□□ -0.06
FAM47DP-201ENST00000402340 DHX32Q7L7V1 743 aaKnown RBP14.66□□□□□ -0.06
FAM47DP-201ENST00000402340 CLIP2Q9UDT6 1046 aa14.66□□□□□ -0.06
FAM47DP-201ENST00000402340 NEMFO60524 1076 aa14.66□□□□□ -0.06
FAM47DP-201ENST00000402340 SEC62Q99442 399 aaKnown RBP14.66□□□□□ -0.06
FAM47DP-201ENST00000402340 DSCC1Q9BVC3 393 aa14.66□□□□□ -0.06
FAM47DP-201ENST00000402340 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.66□□□□□ -0.06
FAM47DP-201ENST00000402340 LRRC8AQ8IWT6 810 aa14.65□□□□□ -0.06
FAM47DP-201ENST00000402340 HELLSQ9NRZ9 838 aa14.65□□□□□ -0.06
FAM47DP-201ENST00000402340 RGPD5Q99666 1765 aa14.65□□□□□ -0.06
FAM47DP-201ENST00000402340 AFDNP55196 1824 aaKnown RBP14.65□□□□□ -0.06
FAM47DP-201ENST00000402340 CCDC129Q6ZRS4 1044 aa14.65□□□□□ -0.06
FAM47DP-201ENST00000402340 DDX11Q96FC9 970 aa14.65□□□□□ -0.06
FAM47DP-201ENST00000402340 DBNDD2Q9BQY9 259 aa14.65□□□□□ -0.06
FAM47DP-201ENST00000402340 GOLPH3LQ9H4A5 285 aa14.65□□□□□ -0.06
FAM47DP-201ENST00000402340 H3BQV1 296 aa14.65□□□□□ -0.06
FAM47DP-201ENST00000402340 CHGBP05060 677 aa14.65□□□□□ -0.06
FAM47DP-201ENST00000402340 SLC39A6Q13433 755 aa14.65□□□□□ -0.06
FAM47DP-201ENST00000402340 STX1AQ16623 288 aa14.65□□□□□ -0.06
FAM47DP-201ENST00000402340 IFFO2Q5TF58 517 aa14.65□□□□□ -0.06
FAM47DP-201ENST00000402340 C11orf57Q6ZUT1 292 aaPredicted RBP14.65□□□□□ -0.06
FAM47DP-201ENST00000402340 FEZ1Q99689 392 aa14.65□□□□□ -0.06
FAM47DP-201ENST00000402340 GPR108Q9NPR9 543 aa14.65□□□□□ -0.06
FAM47DP-201ENST00000402340 PHKG2P15735 406 aa14.64□□□□□ -0.07
FAM47DP-201ENST00000402340 EVCP57679 992 aa14.64□□□□□ -0.07
FAM47DP-201ENST00000402340 GTPBP4Q9BZE4 634 aaKnown RBP14.64□□□□□ -0.07
FAM47DP-201ENST00000402340 ALS2Q96Q42 1657 aa14.64□□□□□ -0.07
FAM47DP-201ENST00000402340 MYL6BP14649 208 aa14.64□□□□□ -0.07
FAM47DP-201ENST00000402340 DHX40Q8IX18 779 aaKnown RBP14.64□□□□□ -0.07
FAM47DP-201ENST00000402340 SPEF2Q9C093 1822 aa14.64□□□□□ -0.07
FAM47DP-201ENST00000402340 NYAP1Q6ZVC0 841 aa14.63□□□□□ -0.07
FAM47DP-201ENST00000402340 ILDR1Q86SU0 546 aaPredicted RBP14.63□□□□□ -0.07
FAM47DP-201ENST00000402340 ANKLE2Q86XL3 938 aa14.63□□□□□ -0.07
FAM47DP-201ENST00000402340 ZNF496Q96IT1 587 aaPredicted RBP14.63□□□□□ -0.07
FAM47DP-201ENST00000402340 ARID3AQ99856 593 aa14.63□□□□□ -0.07
FAM47DP-201ENST00000402340 TNNT1P13805 278 aa14.63□□□□□ -0.07
FAM47DP-201ENST00000402340 CCAR1Q8IX12 1150 aaKnown RBP14.63□□□□□ -0.07
FAM47DP-201ENST00000402340 DRC7Q8IY82 874 aa14.63□□□□□ -0.07
FAM47DP-201ENST00000402340 ORAI2Q96SN7 254 aa14.63□□□□□ -0.07
FAM47DP-201ENST00000402340 LAMB4A4D0S4 1761 aa14.63□□□□□ -0.07
FAM47DP-201ENST00000402340 KIF1AQ12756 1690 aa14.63□□□□□ -0.07
FAM47DP-201ENST00000402340 SNRPA1P09661 255 aaKnown RBP14.63□□□□□ -0.07
FAM47DP-201ENST00000402340 ZMYM1Q5SVZ6 1142 aa14.63□□□□□ -0.07
FAM47DP-201ENST00000402340 ZNF274Q96GC6 653 aaPredicted RBP14.63□□□□□ -0.07
FAM47DP-201ENST00000402340 C16orf45Q96MC5 204 aaPredicted RBP14.63□□□□□ -0.07
FAM47DP-201ENST00000402340 NDUFB9Q9Y6M9 179 aa14.63□□□□□ -0.07
FAM47DP-201ENST00000402340 PTPDC1A2A3K4 754 aa14.62□□□□□ -0.07
FAM47DP-201ENST00000402340 FAM160A1Q05DH4 1040 aa14.62□□□□□ -0.07
FAM47DP-201ENST00000402340 NFATC2IPQ8NCF5 419 aa14.62□□□□□ -0.07
FAM47DP-201ENST00000402340 USP16Q9Y5T5 823 aa14.62□□□□□ -0.07
FAM47DP-201ENST00000402340 ATG9AQ7Z3C6 839 aa14.62□□□□□ -0.07
FAM47DP-201ENST00000402340 USP28Q96RU2 1077 aa14.62□□□□□ -0.07
FAM47DP-201ENST00000402340 COL18A1P39060 1754 aa14.62□□□□□ -0.07
FAM47DP-201ENST00000402340 PKD1L3Q7Z443 1732 aa14.62□□□□□ -0.07
FAM47DP-201ENST00000402340 HSP90B1P14625 803 aaKnown RBP14.61□□□□□ -0.07
FAM47DP-201ENST00000402340 CBX1P83916 185 aa14.61□□□□□ -0.07
FAM47DP-201ENST00000402340 FOXO4P98177 505 aa14.61□□□□□ -0.07
FAM47DP-201ENST00000402340 ZNF396Q96N95 335 aaPredicted RBP14.61□□□□□ -0.07
FAM47DP-201ENST00000402340 MEGF6O75095 1541 aa14.61□□□□□ -0.07
FAM47DP-201ENST00000402340 UBE3BQ7Z3V4 1068 aa14.61□□□□□ -0.07
FAM47DP-201ENST00000402340 RBM33Q96EV2 1170 aaKnown RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms