RNA–Protein interactions for RNA: ENST00000401605.5

CLIP4-202, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2 BASIC

Gene CLIP4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-202ENST00000401605 RPS6KA4O75676 772 aa7.49□□□□□ -1.21
CLIP4-202ENST00000401605 MMP10P09238 476 aa7.49□□□□□ -1.21
CLIP4-202ENST00000401605 NME8Q8N427 588 aa7.49□□□□□ -1.21
CLIP4-202ENST00000401605 PPME1Q9Y570 386 aa7.49□□□□□ -1.21
CLIP4-202ENST00000401605 C4BP0C0L5 1744 aa7.48□□□□□ -1.21
CLIP4-202ENST00000401605 HMOX1P09601 288 aa7.48□□□□□ -1.21
CLIP4-202ENST00000401605 RFC4P35249 363 aa7.48□□□□□ -1.21
CLIP4-202ENST00000401605 IRX5P78411 483 aaPredicted RBP7.48□□□□□ -1.21
CLIP4-202ENST00000401605 SF3A1Q15459 793 aaKnown RBP7.48□□□□□ -1.21
CLIP4-202ENST00000401605 STK32AQ8WU08 396 aa7.48□□□□□ -1.21
CLIP4-202ENST00000401605 ANKRD33BA6NCL7 494 aa7.47□□□□□ -1.21
CLIP4-202ENST00000401605 SLC52A2Q9HAB3 445 aa7.47□□□□□ -1.21
CLIP4-202ENST00000401605 RNMTO43148 476 aaKnown RBP7.47□□□□□ -1.21
CLIP4-202ENST00000401605 C7P10643 843 aa7.47□□□□□ -1.21
CLIP4-202ENST00000401605 CRKLP46109 303 aaKnown RBP7.47□□□□□ -1.21
CLIP4-202ENST00000401605 GPATCH3Q96I76 525 aa7.47□□□□□ -1.21
CLIP4-202ENST00000401605 MYCBPQ99417 103 aaPredicted RBP7.47□□□□□ -1.21
CLIP4-202ENST00000401605 PAIP2Q9BPZ3 127 aaKnown RBP7.47□□□□□ -1.21
CLIP4-202ENST00000401605 C5P01031 1676 aa7.47□□□□□ -1.21
CLIP4-202ENST00000401605 GYS1P13807 737 aa7.46□□□□□ -1.21
CLIP4-202ENST00000401605 SERPINB4P48594 390 aa7.46□□□□□ -1.21
CLIP4-202ENST00000401605 MARSP56192 900 aaKnown RBP7.46□□□□□ -1.21
CLIP4-202ENST00000401605 QPCTQ16769 361 aa7.46□□□□□ -1.21
CLIP4-202ENST00000401605 CSPP1Q1MSJ5 1256 aa7.46□□□□□ -1.21
CLIP4-202ENST00000401605 MTHFSDQ2M296 383 aaKnown RBP7.46□□□□□ -1.21
CLIP4-202ENST00000401605 TMEM164Q5U3C3 297 aa7.46□□□□□ -1.21
CLIP4-202ENST00000401605 CDHR5Q9HBB8 845 aa7.46□□□□□ -1.21
CLIP4-202ENST00000401605 LGR6Q9HBX8 967 aa7.46□□□□□ -1.21
CLIP4-202ENST00000401605 ZMIZ1Q9ULJ6 1067 aa7.46□□□□□ -1.21
CLIP4-202ENST00000401605 GOLGB1Q14789 3259 aaKnown RBP7.46□□□□□ -1.21
CLIP4-202ENST00000401605 CCER2I3L3R5 266 aa7.46□□□□□ -1.22
CLIP4-202ENST00000401605 AP1G2O75843 785 aa7.46□□□□□ -1.22
CLIP4-202ENST00000401605 CCDC172P0C7W6 258 aa7.46□□□□□ -1.22
CLIP4-202ENST00000401605 TGFB2P61812 414 aa7.46□□□□□ -1.22
CLIP4-202ENST00000401605 COL24A1Q17RW2 1714 aa7.46□□□□□ -1.22
CLIP4-202ENST00000401605 RBM46Q8TBY0 533 aaKnown RBP7.46□□□□□ -1.22
CLIP4-202ENST00000401605 ITFG2Q969R8 447 aa7.46□□□□□ -1.22
CLIP4-202ENST00000401605 MTA3Q9BTC8 594 aa7.46□□□□□ -1.22
CLIP4-202ENST00000401605 PRM3Q9NNZ6 103 aa7.46□□□□□ -1.22
CLIP4-202ENST00000401605 SUGT1Q9Y2Z0 365 aa7.46□□□□□ -1.22
CLIP4-202ENST00000401605 MAFBQ9Y5Q3 323 aaPredicted RBP7.46□□□□□ -1.22
CLIP4-202ENST00000401605 GOLGA6CA6NDK9 693 aa7.45□□□□□ -1.22
CLIP4-202ENST00000401605 GOLGA6BA6NDN3 693 aa7.45□□□□□ -1.22
CLIP4-202ENST00000401605 U2SURPO15042 1029 aaKnown RBP7.45□□□□□ -1.22
CLIP4-202ENST00000401605 GOLGA6DP0CG33 693 aa7.45□□□□□ -1.22
CLIP4-202ENST00000401605 C1QTNF8P60827 252 aa7.45□□□□□ -1.22
CLIP4-202ENST00000401605 DDX46Q7L014 1031 aaKnown RBP7.45□□□□□ -1.22
CLIP4-202ENST00000401605 GAS2L2Q8NHY3 880 aa7.45□□□□□ -1.22
CLIP4-202ENST00000401605 ALG2Q9H553 416 aa7.45□□□□□ -1.22
CLIP4-202ENST00000401605 CCDC87Q9NVE4 849 aa7.45□□□□□ -1.22
CLIP4-202ENST00000401605 GOLGA6AQ9NYA3 693 aa7.45□□□□□ -1.22
CLIP4-202ENST00000401605 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.45□□□□□ -1.22
CLIP4-202ENST00000401605 PARP3Q9Y6F1 533 aa7.45□□□□□ -1.22
CLIP4-202ENST00000401605 MAP2P11137 1827 aaKnown RBP7.45□□□□□ -1.22
CLIP4-202ENST00000401605 SOWAHDA6NJG2 315 aa7.45□□□□□ -1.22
CLIP4-202ENST00000401605 ESPNB1AK53 854 aa7.45□□□□□ -1.22
CLIP4-202ENST00000401605 TPD52L2O43399 206 aaKnown RBP7.45□□□□□ -1.22
CLIP4-202ENST00000401605 GIGYF1O75420 1035 aaPredicted RBP7.45□□□□□ -1.22
CLIP4-202ENST00000401605 SCP2P22307 547 aa7.45□□□□□ -1.22
CLIP4-202ENST00000401605 SCNN1AP37088 669 aa7.45□□□□□ -1.22
CLIP4-202ENST00000401605 TSNAXIP1Q2TAA8 658 aa7.45□□□□□ -1.22
CLIP4-202ENST00000401605 GORABQ5T7V8 394 aa7.45□□□□□ -1.22
CLIP4-202ENST00000401605 APBB1IPQ7Z5R6 666 aaPredicted RBP7.45□□□□□ -1.22
CLIP4-202ENST00000401605 DNAJC10Q8IXB1 793 aa7.45□□□□□ -1.22
CLIP4-202ENST00000401605 CFAP53Q96M91 514 aa7.45□□□□□ -1.22
CLIP4-202ENST00000401605 FAM210AQ96ND0 272 aa7.45□□□□□ -1.22
CLIP4-202ENST00000401605 USP42Q9H9J4 1324 aaKnown RBP7.45□□□□□ -1.22
CLIP4-202ENST00000401605 DHX16O60231 1041 aaKnown RBP7.44□□□□□ -1.22
CLIP4-202ENST00000401605 VAMP1P23763 118 aa7.44□□□□□ -1.22
CLIP4-202ENST00000401605 SLC39A6Q13433 755 aa7.44□□□□□ -1.22
CLIP4-202ENST00000401605 ZRSR2Q15696 482 aaKnown RBP7.44□□□□□ -1.22
CLIP4-202ENST00000401605 C9orf131Q5VYM1 1079 aa7.44□□□□□ -1.22
CLIP4-202ENST00000401605 INTS5Q6P9B9 1019 aaKnown RBP7.44□□□□□ -1.22
CLIP4-202ENST00000401605 CHMP4CQ96CF2 233 aa7.44□□□□□ -1.22
CLIP4-202ENST00000401605 RBM27Q9P2N5 1060 aaKnown RBP7.44□□□□□ -1.22
CLIP4-202ENST00000401605 WWC3Q9ULE0 1092 aa7.44□□□□□ -1.22
CLIP4-202ENST00000401605 TUBGCP6Q96RT7 1819 aa7.44□□□□□ -1.22
CLIP4-202ENST00000401605 USP17L8P0C7I0 530 aa7.44□□□□□ -1.22
CLIP4-202ENST00000401605 B4GALNT3Q6L9W6 998 aa7.44□□□□□ -1.22
CLIP4-202ENST00000401605 TTC5Q8N0Z6 440 aa7.44□□□□□ -1.22
CLIP4-202ENST00000401605 CCDC94Q9BW85 323 aaPredicted RBP7.44□□□□□ -1.22
CLIP4-202ENST00000401605 NPDC1Q9NQX5 325 aaPredicted RBP7.44□□□□□ -1.22
CLIP4-202ENST00000401605 CGNQ9P2M7 1197 aaKnown RBP7.44□□□□□ -1.22
CLIP4-202ENST00000401605 NUDCQ9Y266 331 aa7.44□□□□□ -1.22
CLIP4-202ENST00000401605 GNAT3A8MTJ3 354 aa7.43□□□□□ -1.22
CLIP4-202ENST00000401605 ZPR1O75312 459 aa7.43□□□□□ -1.22
CLIP4-202ENST00000401605 CYP19A1P11511 503 aaPredicted RBP7.43□□□□□ -1.22
CLIP4-202ENST00000401605 MAP3K9P80192 1104 aa7.43□□□□□ -1.22
CLIP4-202ENST00000401605 TEFQ10587 303 aa7.43□□□□□ -1.22
CLIP4-202ENST00000401605 ZNF710Q8N1W2 664 aa7.43□□□□□ -1.22
CLIP4-202ENST00000401605 PRR7Q8TB68 274 aa7.43□□□□□ -1.22
CLIP4-202ENST00000401605 NBPF3Q9H094 633 aa7.43□□□□□ -1.22
CLIP4-202ENST00000401605 SRP68Q9UHB9 627 aaKnown RBP7.43□□□□□ -1.22
CLIP4-202ENST00000401605 SOS1Q07889 1333 aaPredicted RBP7.43□□□□□ -1.22
CLIP4-202ENST00000401605 C10orf71Q711Q0 1435 aa7.43□□□□□ -1.22
CLIP4-202ENST00000401605 MRC1P22897 1456 aa7.43□□□□□ -1.22
CLIP4-202ENST00000401605 A0A0G2JLW4 131 aa7.43□□□□□ -1.22
CLIP4-202ENST00000401605 EP400NLQ6ZTU2 488 aa7.43□□□□□ -1.22
CLIP4-202ENST00000401605 RIC3Q7Z5B4 369 aa7.43□□□□□ -1.22
CLIP4-202ENST00000401605 VTI1AQ96AJ9 217 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms