RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 SULF1Q8IWU6 871 aa6.98□□□□□ -1.29
HMGB3P7-201ENST00000400214 GPATCH11Q8N954 259 aa6.98□□□□□ -1.29
HMGB3P7-201ENST00000400214 GTF3C2Q8WUA4 911 aaPredicted RBP6.98□□□□□ -1.29
HMGB3P7-201ENST00000400214 TESK2Q96S53 571 aa6.98□□□□□ -1.29
HMGB3P7-201ENST00000400214 MRS2Q9HD23 443 aa6.98□□□□□ -1.29
HMGB3P7-201ENST00000400214 RGS17Q9UGC6 210 aaPredicted RBP6.98□□□□□ -1.29
HMGB3P7-201ENST00000400214 DNMT3AQ9Y6K1 912 aaPredicted RBP6.98□□□□□ -1.29
HMGB3P7-201ENST00000400214 ARHGEF10O15013 1369 aa6.97□□□□□ -1.29
HMGB3P7-201ENST00000400214 USP54Q70EL1 1684 aa6.97□□□□□ -1.29
HMGB3P7-201ENST00000400214 HMGB1P1B2RPK0 211 aaPredicted RBP6.97□□□□□ -1.29
HMGB3P7-201ENST00000400214 SH3BP5O60239 455 aa6.97□□□□□ -1.29
HMGB3P7-201ENST00000400214 S100BP04271 92 aaPredicted RBP6.97□□□□□ -1.29
HMGB3P7-201ENST00000400214 APLP1P51693 650 aa6.97□□□□□ -1.29
HMGB3P7-201ENST00000400214 TBX4P57082 545 aa6.97□□□□□ -1.29
HMGB3P7-201ENST00000400214 GUCA2AQ02747 115 aa6.97□□□□□ -1.29
HMGB3P7-201ENST00000400214 OCLNQ16625 522 aa6.97□□□□□ -1.29
HMGB3P7-201ENST00000400214 PPIP5K1Q6PFW1 1433 aa6.97□□□□□ -1.29
HMGB3P7-201ENST00000400214 NRKQ7Z2Y5 1582 aa6.97□□□□□ -1.29
HMGB3P7-201ENST00000400214 TMC7Q7Z402 723 aa6.97□□□□□ -1.29
HMGB3P7-201ENST00000400214 RNF135Q8IUD6 432 aa6.97□□□□□ -1.29
HMGB3P7-201ENST00000400214 FMNL3Q8IVF7 1028 aa6.97□□□□□ -1.29
HMGB3P7-201ENST00000400214 CCAR1Q8IX12 1150 aaKnown RBP6.97□□□□□ -1.29
HMGB3P7-201ENST00000400214 ZFRQ96KR1 1074 aaKnown RBP6.97□□□□□ -1.29
HMGB3P7-201ENST00000400214 SEPT3Q9UH03 358 aa6.97□□□□□ -1.29
HMGB3P7-201ENST00000400214 PNMA2Q9UL42 364 aa6.97□□□□□ -1.29
HMGB3P7-201ENST00000400214 NWD2Q9ULI1 1742 aa6.97□□□□□ -1.29
HMGB3P7-201ENST00000400214 ACEP12821 1306 aa6.97□□□□□ -1.29
HMGB3P7-201ENST00000400214 ATAD2Q6PL18 1390 aa6.96□□□□□ -1.29
HMGB3P7-201ENST00000400214 CPSF1Q10570 1443 aaKnown RBP6.96□□□□□ -1.3
HMGB3P7-201ENST00000400214 SSH2Q76I76 1423 aa6.96□□□□□ -1.3
HMGB3P7-201ENST00000400214 DNAJC6O75061 913 aa6.96□□□□□ -1.3
HMGB3P7-201ENST00000400214 FMNL1O95466 1100 aaPredicted RBP6.96□□□□□ -1.3
HMGB3P7-201ENST00000400214 FBXO45P0C2W1 286 aa6.96□□□□□ -1.3
HMGB3P7-201ENST00000400214 PTMSP20962 102 aa6.96□□□□□ -1.3
HMGB3P7-201ENST00000400214 FOXD4Q12950 439 aaPredicted RBP6.96□□□□□ -1.3
HMGB3P7-201ENST00000400214 PDE3BQ13370 1112 aa6.96□□□□□ -1.3
HMGB3P7-201ENST00000400214 LONRF3Q496Y0 759 aa6.96□□□□□ -1.3
HMGB3P7-201ENST00000400214 ZFYVE27Q5T4F4 411 aa6.96□□□□□ -1.3
HMGB3P7-201ENST00000400214 TYW1BQ6NUM6 668 aa6.96□□□□□ -1.3
HMGB3P7-201ENST00000400214 TSHZ1Q6ZSZ6 1077 aa6.96□□□□□ -1.3
HMGB3P7-201ENST00000400214 MCF2L2Q86YR7 1114 aa6.96□□□□□ -1.3
HMGB3P7-201ENST00000400214 NGDNQ8NEJ9 315 aaKnown RBP6.96□□□□□ -1.3
HMGB3P7-201ENST00000400214 HLA-CQ95604 372 aa6.96□□□□□ -1.3
HMGB3P7-201ENST00000400214 ZNF594Q96JF6 807 aaPredicted RBP6.96□□□□□ -1.3
HMGB3P7-201ENST00000400214 DUSP9Q99956 384 aaKnown RBP6.96□□□□□ -1.3
HMGB3P7-201ENST00000400214 VTI1BQ9UEU0 232 aa6.96□□□□□ -1.3
HMGB3P7-201ENST00000400214 INPP5FQ9Y2H2 1132 aa6.96□□□□□ -1.3
HMGB3P7-201ENST00000400214 PHRF1Q9P1Y6 1649 aaKnown RBP6.96□□□□□ -1.3
HMGB3P7-201ENST00000400214 PLCH1Q4KWH8 1693 aa6.96□□□□□ -1.3
HMGB3P7-201ENST00000400214 USP47Q96K76 1375 aa6.95□□□□□ -1.3
HMGB3P7-201ENST00000400214 ST20-MTHFSA0A0A6YYL1 179 aa6.95□□□□□ -1.3
HMGB3P7-201ENST00000400214 SORBS3O60504 671 aa6.95□□□□□ -1.3
HMGB3P7-201ENST00000400214 STK10O94804 968 aaKnown RBP6.95□□□□□ -1.3
HMGB3P7-201ENST00000400214 XRCC5P13010 732 aaKnown RBP6.95□□□□□ -1.3
HMGB3P7-201ENST00000400214 FKBP4Q02790 459 aaKnown RBP eCLIP6.95□□□□□ -1.3
HMGB3P7-201ENST00000400214 FMR1Q06787 632 aaKnown RBP eCLIP6.95□□□□□ -1.3
HMGB3P7-201ENST00000400214 KCNH2Q12809 1159 aa6.95□□□□□ -1.3
HMGB3P7-201ENST00000400214 MTMR2Q13614 643 aa6.95□□□□□ -1.3
HMGB3P7-201ENST00000400214 TMC4Q7Z404 712 aa6.95□□□□□ -1.3
HMGB3P7-201ENST00000400214 FAM9BQ8IZU0 186 aa6.95□□□□□ -1.3
HMGB3P7-201ENST00000400214 OGFOD1Q8N543 542 aa6.95□□□□□ -1.3
HMGB3P7-201ENST00000400214 MRFAP1L1Q96HT8 127 aa6.95□□□□□ -1.3
HMGB3P7-201ENST00000400214 PRKD2Q9BZL6 878 aa6.95□□□□□ -1.3
HMGB3P7-201ENST00000400214 SPC25Q9HBM1 224 aa6.95□□□□□ -1.3
HMGB3P7-201ENST00000400214 PIK3C2AO00443 1686 aa6.95□□□□□ -1.3
HMGB3P7-201ENST00000400214 COL14A1Q05707 1796 aaKnown RBP6.95□□□□□ -1.3
HMGB3P7-201ENST00000400214 USP6P35125 1406 aa6.94□□□□□ -1.3
HMGB3P7-201ENST00000400214 MYOM1P52179 1685 aa6.94□□□□□ -1.3
HMGB3P7-201ENST00000400214 CD163L1Q9NR16 1453 aa6.94□□□□□ -1.3
HMGB3P7-201ENST00000400214 ENPP3O14638 875 aa6.94□□□□□ -1.3
HMGB3P7-201ENST00000400214 COL9A1P20849 921 aa6.94□□□□□ -1.3
HMGB3P7-201ENST00000400214 CLDN10P78369 228 aa6.94□□□□□ -1.3
HMGB3P7-201ENST00000400214 C4orf46Q504U0 113 aa6.94□□□□□ -1.3
HMGB3P7-201ENST00000400214 ZNF772Q68DY9 489 aaPredicted RBP6.94□□□□□ -1.3
HMGB3P7-201ENST00000400214 ILDR2Q71H61 639 aa6.94□□□□□ -1.3
HMGB3P7-201ENST00000400214 JDP2Q8WYK2 163 aa6.94□□□□□ -1.3
HMGB3P7-201ENST00000400214 MAF1Q9H063 256 aa6.94□□□□□ -1.3
HMGB3P7-201ENST00000400214 CABP1Q9NZU7 370 aa6.94□□□□□ -1.3
HMGB3P7-201ENST00000400214 V9GY48 417 aaPredicted RBP6.94□□□□□ -1.3
HMGB3P7-201ENST00000400214 SLIT2O94813 1529 aa6.94□□□□□ -1.3
HMGB3P7-201ENST00000400214 NINLQ9Y2I6 1382 aa6.94□□□□□ -1.3
HMGB3P7-201ENST00000400214 NRAPQ86VF7 1730 aa6.93□□□□□ -1.3
HMGB3P7-201ENST00000400214 LDHBP07195 334 aaKnown RBP6.93□□□□□ -1.3
HMGB3P7-201ENST00000400214 DAB2P98082 770 aa6.93□□□□□ -1.3
HMGB3P7-201ENST00000400214 AMPD3Q01432 767 aa6.93□□□□□ -1.3
HMGB3P7-201ENST00000400214 BIRC2Q13490 618 aa6.93□□□□□ -1.3
HMGB3P7-201ENST00000400214 NFE2L2Q16236 605 aa6.93□□□□□ -1.3
HMGB3P7-201ENST00000400214 MEX3CQ5U5Q3 659 aaKnown RBP6.93□□□□□ -1.3
HMGB3P7-201ENST00000400214 POTEAQ6S8J7 498 aa6.93□□□□□ -1.3
HMGB3P7-201ENST00000400214 NAP1L5Q96NT1 182 aaPredicted RBP6.93□□□□□ -1.3
HMGB3P7-201ENST00000400214 RPS6KC1Q96S38 1066 aa6.93□□□□□ -1.3
HMGB3P7-201ENST00000400214 AFF2P51816 1311 aa6.93□□□□□ -1.3
HMGB3P7-201ENST00000400214 BCL9LQ86UU0 1499 aa6.92□□□□□ -1.3
HMGB3P7-201ENST00000400214 CDK12Q9NYV4 1490 aaPredicted RBP6.92□□□□□ -1.3
HMGB3P7-201ENST00000400214 SLIT3O75094 1523 aa6.92□□□□□ -1.3
HMGB3P7-201ENST00000400214 K7ELQ4 463 aaPredicted RBP6.92□□□□□ -1.3
HMGB3P7-201ENST00000400214 TREHO43280 583 aa6.92□□□□□ -1.3
HMGB3P7-201ENST00000400214 PRC1O43663 620 aa6.92□□□□□ -1.3
HMGB3P7-201ENST00000400214 PRPF40AO75400 957 aaKnown RBP6.92□□□□□ -1.3
HMGB3P7-201ENST00000400214 DKK1O94907 266 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms