RNA–Protein interactions for RNA: ENST00000399866.3

LINC02449-202, Transcript of long intergenic non-protein coding RNA 2449, humanhuman

TSL 3 BASIC

Gene LINC02449, Length 517 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02449-202ENST00000399866 BICDL1Q6ZP65 573 aa10.43□□□□□ -0.74
LINC02449-202ENST00000399866 KIAA1211Q6ZU35 1233 aa10.43□□□□□ -0.74
LINC02449-202ENST00000399866 ARHGEF1Q92888 912 aaKnown RBP10.43□□□□□ -0.74
LINC02449-202ENST00000399866 FAM227BQ96M60 508 aa10.43□□□□□ -0.74
LINC02449-202ENST00000399866 SNRKQ9NRH2 765 aa10.43□□□□□ -0.74
LINC02449-202ENST00000399866 PALD1Q9ULE6 856 aa10.43□□□□□ -0.74
LINC02449-202ENST00000399866 A0A1B0GUL6 1792 aa10.43□□□□□ -0.74
LINC02449-202ENST00000399866 TNRC6CQ9HCJ0 1690 aaKnown RBP10.42□□□□□ -0.74
LINC02449-202ENST00000399866 K7ELQ4 463 aaPredicted RBP10.42□□□□□ -0.74
LINC02449-202ENST00000399866 PHF14O94880 888 aa10.42□□□□□ -0.74
LINC02449-202ENST00000399866 IFIT1P09914 478 aaKnown RBP10.42□□□□□ -0.74
LINC02449-202ENST00000399866 ADRA2BP18089 450 aa10.42□□□□□ -0.74
LINC02449-202ENST00000399866 HSPA4P34932 840 aa10.42□□□□□ -0.74
LINC02449-202ENST00000399866 CCDC158Q5M9N0 1113 aa10.42□□□□□ -0.74
LINC02449-202ENST00000399866 TTC39AQ5SRH9 613 aa10.42□□□□□ -0.74
LINC02449-202ENST00000399866 GORABQ5T7V8 394 aa10.42□□□□□ -0.74
LINC02449-202ENST00000399866 DDX46Q7L014 1031 aaKnown RBP10.42□□□□□ -0.74
LINC02449-202ENST00000399866 XAGE2Q96GT9 111 aa10.42□□□□□ -0.74
LINC02449-202ENST00000399866 NYXQ9GZU5 481 aa10.42□□□□□ -0.74
LINC02449-202ENST00000399866 ANTXR1Q9H6X2 564 aa10.42□□□□□ -0.74
LINC02449-202ENST00000399866 SEC31BQ9NQW1 1179 aa10.42□□□□□ -0.74
LINC02449-202ENST00000399866 PAG1Q9NWQ8 432 aa10.42□□□□□ -0.74
LINC02449-202ENST00000399866 NDUFB9Q9Y6M9 179 aa10.42□□□□□ -0.74
LINC02449-202ENST00000399866 CCDC171Q6TFL3 1326 aa10.41□□□□□ -0.74
LINC02449-202ENST00000399866 GOLIM4O00461 696 aa10.41□□□□□ -0.74
LINC02449-202ENST00000399866 ST18O60284 1047 aa10.41□□□□□ -0.74
LINC02449-202ENST00000399866 RFC4P35249 363 aa10.41□□□□□ -0.74
LINC02449-202ENST00000399866 IGHMBP2P38935 993 aaKnown RBP10.41□□□□□ -0.74
LINC02449-202ENST00000399866 SF3B3Q15393 1217 aaKnown RBP10.41□□□□□ -0.74
LINC02449-202ENST00000399866 PUM3Q15397 648 aaKnown RBP10.41□□□□□ -0.74
LINC02449-202ENST00000399866 SLC10A5Q5PT55 438 aa10.41□□□□□ -0.74
LINC02449-202ENST00000399866 TRAPPC3LQ5T215 181 aa10.41□□□□□ -0.74
LINC02449-202ENST00000399866 C3orf67Q6ZVT6 689 aa10.41□□□□□ -0.74
LINC02449-202ENST00000399866 NBPF5PQ86XG9 351 aaPredicted RBP10.41□□□□□ -0.74
LINC02449-202ENST00000399866 TICAM2Q86XR7 235 aa10.41□□□□□ -0.74
LINC02449-202ENST00000399866 KBTBD3Q8NAB2 608 aa10.41□□□□□ -0.74
LINC02449-202ENST00000399866 SETDB2Q96T68 719 aa10.41□□□□□ -0.74
LINC02449-202ENST00000399866 SLKQ9H2G2 1235 aaPredicted RBP10.41□□□□□ -0.74
LINC02449-202ENST00000399866 TNS1Q9HBL0 1735 aaKnown RBP10.41□□□□□ -0.74
LINC02449-202ENST00000399866 CARMIL3Q8ND23 1372 aa10.4□□□□□ -0.74
LINC02449-202ENST00000399866 PDE8BO95263 885 aa10.4□□□□□ -0.74
LINC02449-202ENST00000399866 FGFR2P21802 821 aa10.4□□□□□ -0.74
LINC02449-202ENST00000399866 PTH1RQ03431 593 aa10.4□□□□□ -0.74
LINC02449-202ENST00000399866 CDC5LQ99459 802 aaKnown RBP10.4□□□□□ -0.74
LINC02449-202ENST00000399866 MPHOSPH8Q99549 860 aa10.4□□□□□ -0.74
LINC02449-202ENST00000399866 RGPD3A6NKT7 1758 aaPredicted RBP10.39□□□□□ -0.75
LINC02449-202ENST00000399866 RGPD4Q7Z3J3 1758 aa10.39□□□□□ -0.75
LINC02449-202ENST00000399866 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.39□□□□□ -0.75
LINC02449-202ENST00000399866 SLC5A1P13866 664 aa10.39□□□□□ -0.75
LINC02449-202ENST00000399866 SSFA2P28290 1259 aa10.39□□□□□ -0.75
LINC02449-202ENST00000399866 RXRBP28702 533 aa10.39□□□□□ -0.75
LINC02449-202ENST00000399866 GTF2E1P29083 439 aaPredicted RBP10.39□□□□□ -0.75
LINC02449-202ENST00000399866 ZNF589Q86UQ0 364 aaPredicted RBP10.39□□□□□ -0.75
LINC02449-202ENST00000399866 SPRYD3Q8NCJ5 442 aa10.39□□□□□ -0.75
LINC02449-202ENST00000399866 LPIN2Q92539 896 aa10.39□□□□□ -0.75
LINC02449-202ENST00000399866 ZNF512BQ96KM6 892 aaPredicted RBP10.39□□□□□ -0.75
LINC02449-202ENST00000399866 SNX14Q9Y5W7 946 aa10.39□□□□□ -0.75
LINC02449-202ENST00000399866 ZAP70P43403 619 aa10.38□□□□□ -0.75
LINC02449-202ENST00000399866 NEK4P51957 841 aa10.38□□□□□ -0.75
LINC02449-202ENST00000399866 SCARF1Q14162 830 aa10.38□□□□□ -0.75
LINC02449-202ENST00000399866 NFIXQ14938 502 aa10.38□□□□□ -0.75
LINC02449-202ENST00000399866 TXNRD1Q16881 649 aa10.38□□□□□ -0.75
LINC02449-202ENST00000399866 TPTE2Q6XPS3 522 aa10.38□□□□□ -0.75
LINC02449-202ENST00000399866 ANKRD18AQ8IVF6 992 aa10.38□□□□□ -0.75
LINC02449-202ENST00000399866 HELBQ8NG08 1087 aaPredicted RBP10.38□□□□□ -0.75
LINC02449-202ENST00000399866 KCNB2Q92953 911 aa10.38□□□□□ -0.75
LINC02449-202ENST00000399866 RBM8AQ9Y5S9 174 aaKnown RBP10.38□□□□□ -0.75
LINC02449-202ENST00000399866 RNF113AO15541 343 aaKnown RBP10.37□□□□□ -0.75
LINC02449-202ENST00000399866 CHGBP05060 677 aa10.37□□□□□ -0.75
LINC02449-202ENST00000399866 UQCRFS1P1P0C7P4 283 aa10.37□□□□□ -0.75
LINC02449-202ENST00000399866 HMGB2P26583 209 aaKnown RBP10.37□□□□□ -0.75
LINC02449-202ENST00000399866 ARID4AP29374 1257 aaPredicted RBP10.37□□□□□ -0.75
LINC02449-202ENST00000399866 DDIT3P35638 169 aa10.37□□□□□ -0.75
LINC02449-202ENST00000399866 MCAMP43121 646 aa10.37□□□□□ -0.75
LINC02449-202ENST00000399866 PHKA1P46020 1223 aa10.37□□□□□ -0.75
LINC02449-202ENST00000399866 FKBP4Q02790 459 aaKnown RBP eCLIP10.37□□□□□ -0.75
LINC02449-202ENST00000399866 CHRNDQ07001 517 aa10.37□□□□□ -0.75
LINC02449-202ENST00000399866 NBR1Q14596 966 aa10.37□□□□□ -0.75
LINC02449-202ENST00000399866 NECTIN1Q15223 517 aa10.37□□□□□ -0.75
LINC02449-202ENST00000399866 MCMDC2Q4G0Z9 681 aa10.37□□□□□ -0.75
LINC02449-202ENST00000399866 ZMYM1Q5SVZ6 1142 aa10.37□□□□□ -0.75
LINC02449-202ENST00000399866 PRPF40BQ6NWY9 871 aaKnown RBP10.37□□□□□ -0.75
LINC02449-202ENST00000399866 RASEFQ8IZ41 740 aa10.37□□□□□ -0.75
LINC02449-202ENST00000399866 IL27Q8NEV9 243 aa10.37□□□□□ -0.75
LINC02449-202ENST00000399866 MAP4K1Q92918 833 aa10.37□□□□□ -0.75
LINC02449-202ENST00000399866 HELLSQ9NRZ9 838 aa10.37□□□□□ -0.75
LINC02449-202ENST00000399866 CHMP5Q9NZZ3 219 aa10.37□□□□□ -0.75
LINC02449-202ENST00000399866 TAF5LO75529 589 aa10.36□□□□□ -0.75
LINC02449-202ENST00000399866 HSP90AA1P07900 732 aaKnown RBP10.36□□□□□ -0.75
LINC02449-202ENST00000399866 GYS1P13807 737 aa10.36□□□□□ -0.75
LINC02449-202ENST00000399866 KCNJ4P48050 445 aa10.36□□□□□ -0.75
LINC02449-202ENST00000399866 MCM2P49736 904 aa10.36□□□□□ -0.75
LINC02449-202ENST00000399866 LRRFIP1Q32MZ4 808 aaKnown RBP10.36□□□□□ -0.75
LINC02449-202ENST00000399866 CREB3L3Q68CJ9 461 aa10.36□□□□□ -0.75
LINC02449-202ENST00000399866 CCDC102BQ68D86 513 aa10.36□□□□□ -0.75
LINC02449-202ENST00000399866 PI16Q6UXB8 463 aa10.36□□□□□ -0.75
LINC02449-202ENST00000399866 CCDC129Q6ZRS4 1044 aa10.36□□□□□ -0.75
LINC02449-202ENST00000399866 PROM2Q8N271 834 aa10.36□□□□□ -0.75
LINC02449-202ENST00000399866 NLRP3Q96P20 1036 aa10.36□□□□□ -0.75
LINC02449-202ENST00000399866 SEC62Q99442 399 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms