RNA–Protein interactions for RNA: ENST00000399196.1

LINC00243-201, long intergenic non-protein coding RNA 243, humanhuman

TSL 2 BASIC

Gene LINC00243, Length 2,052 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00243-201ENST00000399196 NEUROD6Q96NK8 337 aa11.42□□□□□ -0.58
LINC00243-201ENST00000399196 BCORQ6W2J9 1755 aa11.42□□□□□ -0.58
LINC00243-201ENST00000399196 RAD50Q92878 1312 aa11.42□□□□□ -0.58
LINC00243-201ENST00000399196 HCLS1P14317 486 aaPredicted RBP11.42□□□□□ -0.58
LINC00243-201ENST00000399196 HSPA4P34932 840 aa11.42□□□□□ -0.58
LINC00243-201ENST00000399196 PTH1RQ03431 593 aa11.42□□□□□ -0.58
LINC00243-201ENST00000399196 USPL1Q5W0Q7 1092 aa11.42□□□□□ -0.58
LINC00243-201ENST00000399196 BICDL1Q6ZP65 573 aa11.42□□□□□ -0.58
LINC00243-201ENST00000399196 EVI5LQ96CN4 794 aa11.42□□□□□ -0.58
LINC00243-201ENST00000399196 GREM2Q9H772 168 aa11.42□□□□□ -0.58
LINC00243-201ENST00000399196 CEP126Q9P2H0 1117 aa11.42□□□□□ -0.58
LINC00243-201ENST00000399196 NARFQ9UHQ1 456 aa11.42□□□□□ -0.58
LINC00243-201ENST00000399196 PHF14O94880 888 aa11.41□□□□□ -0.58
LINC00243-201ENST00000399196 GTF2E1P29083 439 aaPredicted RBP11.41□□□□□ -0.58
LINC00243-201ENST00000399196 RFC4P35249 363 aa11.41□□□□□ -0.58
LINC00243-201ENST00000399196 TIMM10P62072 90 aa11.41□□□□□ -0.58
LINC00243-201ENST00000399196 LDHAL6AQ6ZMR3 332 aa11.41□□□□□ -0.58
LINC00243-201ENST00000399196 RASEFQ8IZ41 740 aa11.41□□□□□ -0.58
LINC00243-201ENST00000399196 ANO8Q9HCE9 1232 aaPredicted RBP11.41□□□□□ -0.58
LINC00243-201ENST00000399196 CHMP5Q9NZZ3 219 aa11.41□□□□□ -0.58
LINC00243-201ENST00000399196 SCN7AQ01118 1682 aa11.41□□□□□ -0.58
LINC00243-201ENST00000399196 A0A0D9SFI3 127 aa11.4□□□□□ -0.58
LINC00243-201ENST00000399196 RGL2O15211 777 aa11.4□□□□□ -0.58
LINC00243-201ENST00000399196 NTSR2O95665 410 aa11.4□□□□□ -0.58
LINC00243-201ENST00000399196 ATP5JP18859 108 aa11.4□□□□□ -0.58
LINC00243-201ENST00000399196 GPR108Q9NPR9 543 aa11.4□□□□□ -0.58
LINC00243-201ENST00000399196 CNNM1Q9NRU3 951 aa11.4□□□□□ -0.58
LINC00243-201ENST00000399196 SRP68Q9UHB9 627 aaKnown RBP11.4□□□□□ -0.58
LINC00243-201ENST00000399196 NEK4P51957 841 aa11.4□□□□□ -0.58
LINC00243-201ENST00000399196 NMIQ13287 307 aaPredicted RBP11.4□□□□□ -0.58
LINC00243-201ENST00000399196 TRAPPC3LQ5T215 181 aa11.4□□□□□ -0.58
LINC00243-201ENST00000399196 ARHGEF1Q92888 912 aaKnown RBP11.4□□□□□ -0.58
LINC00243-201ENST00000399196 AKT1S1Q96B36 256 aa11.4□□□□□ -0.58
LINC00243-201ENST00000399196 AKAP2Q9Y2D5 859 aa11.4□□□□□ -0.58
LINC00243-201ENST00000399196 ZNF609O15014 1411 aa11.4□□□□□ -0.58
LINC00243-201ENST00000399196 COL9A3Q14050 684 aaPredicted RBP11.39□□□□□ -0.59
LINC00243-201ENST00000399196 CCDC152Q4G0S7 254 aa11.39□□□□□ -0.59
LINC00243-201ENST00000399196 METTL24Q5JXM2 366 aa11.39□□□□□ -0.59
LINC00243-201ENST00000399196 TBC1D9BQ66K14 1250 aa11.39□□□□□ -0.59
LINC00243-201ENST00000399196 UPF1Q92900 1129 aaKnown RBP eCLIP11.39□□□□□ -0.59
LINC00243-201ENST00000399196 SETDB2Q96T68 719 aa11.39□□□□□ -0.59
LINC00243-201ENST00000399196 ARID3AQ99856 593 aa11.39□□□□□ -0.59
LINC00243-201ENST00000399196 UPF3BQ9BZI7 483 aaKnown RBP11.39□□□□□ -0.59
LINC00243-201ENST00000399196 DIAPH3Q9NSV4 1193 aa11.39□□□□□ -0.59
LINC00243-201ENST00000399196 NPHP1O15259 732 aa11.39□□□□□ -0.59
LINC00243-201ENST00000399196 BAG6P46379 1132 aa11.39□□□□□ -0.59
LINC00243-201ENST00000399196 ANAPC15P60006 121 aa11.39□□□□□ -0.59
LINC00243-201ENST00000399196 SF3B2Q13435 895 aaKnown RBP11.39□□□□□ -0.59
LINC00243-201ENST00000399196 BCL2L12Q9HB09 334 aa11.39□□□□□ -0.59
LINC00243-201ENST00000399196 SNX14Q9Y5W7 946 aa11.39□□□□□ -0.59
LINC00243-201ENST00000399196 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.38□□□□□ -0.59
LINC00243-201ENST00000399196 A0A1B0GUL7 405 aa11.38□□□□□ -0.59
LINC00243-201ENST00000399196 EPB41L2O43491 1005 aaKnown RBP11.38□□□□□ -0.59
LINC00243-201ENST00000399196 HMGB2P26583 209 aaKnown RBP11.38□□□□□ -0.59
LINC00243-201ENST00000399196 SLFNL1Q499Z3 407 aa11.38□□□□□ -0.59
LINC00243-201ENST00000399196 GORABQ5T7V8 394 aa11.38□□□□□ -0.59
LINC00243-201ENST00000399196 ZNF589Q86UQ0 364 aaPredicted RBP11.38□□□□□ -0.59
LINC00243-201ENST00000399196 ZGPATQ8N5A5 531 aaKnown RBP11.38□□□□□ -0.59
LINC00243-201ENST00000399196 NYXQ9GZU5 481 aa11.38□□□□□ -0.59
LINC00243-201ENST00000399196 RIC1Q4ADV7 1423 aa11.37□□□□□ -0.59
LINC00243-201ENST00000399196 ERFEQ4G0M1 354 aa11.37□□□□□ -0.59
LINC00243-201ENST00000399196 NBPF5PQ86XG9 351 aaPredicted RBP11.37□□□□□ -0.59
LINC00243-201ENST00000399196 RUFY2Q8WXA3 655 aa11.37□□□□□ -0.59
LINC00243-201ENST00000399196 DNAJC2Q99543 621 aaKnown RBP11.37□□□□□ -0.59
LINC00243-201ENST00000399196 MPHOSPH8Q99549 860 aa11.37□□□□□ -0.59
LINC00243-201ENST00000399196 HAUS7Q99871 368 aa11.37□□□□□ -0.59
LINC00243-201ENST00000399196 FSD1Q9BTV5 496 aa11.37□□□□□ -0.59
LINC00243-201ENST00000399196 SNRKQ9NRH2 765 aa11.37□□□□□ -0.59
LINC00243-201ENST00000399196 MED23Q9ULK4 1368 aa11.37□□□□□ -0.59
LINC00243-201ENST00000399196 DDX60Q8IY21 1712 aaKnown RBP11.37□□□□□ -0.59
LINC00243-201ENST00000399196 HIP1O00291 1037 aa11.37□□□□□ -0.59
LINC00243-201ENST00000399196 ST18O60284 1047 aa11.37□□□□□ -0.59
LINC00243-201ENST00000399196 MCCP23508 829 aa11.37□□□□□ -0.59
LINC00243-201ENST00000399196 ADORA1P30542 326 aa11.37□□□□□ -0.59
LINC00243-201ENST00000399196 PKP1Q13835 747 aa11.37□□□□□ -0.59
LINC00243-201ENST00000399196 DDX46Q7L014 1031 aaKnown RBP11.37□□□□□ -0.59
LINC00243-201ENST00000399196 RIPOR2Q9Y4F9 1068 aa11.37□□□□□ -0.59
LINC00243-201ENST00000399196 TAF6LQ9Y6J9 622 aa11.37□□□□□ -0.59
LINC00243-201ENST00000399196 COL4A1P02462 1669 aa11.37□□□□□ -0.59
LINC00243-201ENST00000399196 CCDC171Q6TFL3 1326 aa11.36□□□□□ -0.59
LINC00243-201ENST00000399196 CPA1P15085 419 aa11.36□□□□□ -0.59
LINC00243-201ENST00000399196 IGHMBP2P38935 993 aaKnown RBP11.36□□□□□ -0.59
LINC00243-201ENST00000399196 RAB3GAP1Q15042 981 aa11.36□□□□□ -0.59
LINC00243-201ENST00000399196 NECTIN1Q15223 517 aa11.36□□□□□ -0.59
LINC00243-201ENST00000399196 ADCK5Q3MIX3 580 aa11.36□□□□□ -0.59
LINC00243-201ENST00000399196 CCDC158Q5M9N0 1113 aa11.36□□□□□ -0.59
LINC00243-201ENST00000399196 KIAA1211Q6ZU35 1233 aa11.36□□□□□ -0.59
LINC00243-201ENST00000399196 TNPO1Q92973 898 aaKnown RBP11.36□□□□□ -0.59
LINC00243-201ENST00000399196 TMX3Q96JJ7 454 aa11.36□□□□□ -0.59
LINC00243-201ENST00000399196 SEC62Q99442 399 aaKnown RBP11.36□□□□□ -0.59
LINC00243-201ENST00000399196 HSP90AA1P07900 732 aaKnown RBP11.36□□□□□ -0.59
LINC00243-201ENST00000399196 ATP2B3Q16720 1220 aa11.36□□□□□ -0.59
LINC00243-201ENST00000399196 TPTE2Q6XPS3 522 aa11.36□□□□□ -0.59
LINC00243-201ENST00000399196 NOL8Q76FK4 1167 aaKnown RBP11.36□□□□□ -0.59
LINC00243-201ENST00000399196 CCDC125Q86Z20 511 aa11.36□□□□□ -0.59
LINC00243-201ENST00000399196 SEC31BQ9NQW1 1179 aa11.36□□□□□ -0.59
LINC00243-201ENST00000399196 TFCP2L1Q9NZI6 479 aa11.36□□□□□ -0.59
LINC00243-201ENST00000399196 PNPLA7Q6ZV29 1317 aa11.35□□□□□ -0.59
LINC00243-201ENST00000399196 AKAP11Q9UKA4 1901 aa11.35□□□□□ -0.59
LINC00243-201ENST00000399196 SSFA2P28290 1259 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms