RNA–Protein interactions for RNA: ENST00000399132.5

COL25A1-203, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL25A1, Length 2,724 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-203ENST00000399132 TTLL11Q8NHH1 800 aa18■□□□□ 0.47
COL25A1-203ENST00000399132 XAGE2Q96GT9 111 aa18■□□□□ 0.47
COL25A1-203ENST00000399132 LRRC2Q9BYS8 371 aa18■□□□□ 0.47
COL25A1-203ENST00000399132 ZNF609O15014 1411 aa18■□□□□ 0.47
COL25A1-203ENST00000399132 SPATA31A5Q5VU36 1347 aa18■□□□□ 0.47
COL25A1-203ENST00000399132 SPATA31A7Q8IWB4 1347 aa18■□□□□ 0.47
COL25A1-203ENST00000399132 TAF5LO75529 589 aa18■□□□□ 0.47
COL25A1-203ENST00000399132 AHDC1Q5TGY3 1603 aaPredicted RBP18■□□□□ 0.47
COL25A1-203ENST00000399132 CUL4AQ13619 759 aa18■□□□□ 0.47
COL25A1-203ENST00000399132 TTC39AQ5SRH9 613 aa18■□□□□ 0.47
COL25A1-203ENST00000399132 INTS5Q6P9B9 1019 aaKnown RBP18■□□□□ 0.47
COL25A1-203ENST00000399132 PRDM4Q9UKN5 801 aa18■□□□□ 0.47
COL25A1-203ENST00000399132 BICDL1Q6ZP65 573 aa17.99■□□□□ 0.47
COL25A1-203ENST00000399132 LIMCH1Q9UPQ0 1083 aa17.99■□□□□ 0.47
COL25A1-203ENST00000399132 PANK2Q9BZ23 570 aa17.99■□□□□ 0.47
COL25A1-203ENST00000399132 GOLGA6L3A6NEY3 463 aa17.98■□□□□ 0.47
COL25A1-203ENST00000399132 CTSWP56202 376 aa17.98■□□□□ 0.47
COL25A1-203ENST00000399132 SUSD4Q5VX71 490 aa17.98■□□□□ 0.47
COL25A1-203ENST00000399132 KBTBD3Q8NAB2 608 aa17.98■□□□□ 0.47
COL25A1-203ENST00000399132 CCDC87Q9NVE4 849 aa17.98■□□□□ 0.47
COL25A1-203ENST00000399132 PPFIA3O75145 1194 aa17.98■□□□□ 0.47
COL25A1-203ENST00000399132 DOT1LQ8TEK3 1739 aa17.97■□□□□ 0.47
COL25A1-203ENST00000399132 IL6STP40189 918 aaPredicted RBP17.97■□□□□ 0.47
COL25A1-203ENST00000399132 TRIM28Q13263 835 aaKnown RBP17.97■□□□□ 0.47
COL25A1-203ENST00000399132 MED23Q9ULK4 1368 aa17.97■□□□□ 0.47
COL25A1-203ENST00000399132 PLCH1Q4KWH8 1693 aa17.97■□□□□ 0.47
COL25A1-203ENST00000399132 ME3Q16798 604 aa17.97■□□□□ 0.47
COL25A1-203ENST00000399132 WASHC4Q2M389 1173 aa17.97■□□□□ 0.47
COL25A1-203ENST00000399132 MCMDC2Q4G0Z9 681 aa17.97■□□□□ 0.47
COL25A1-203ENST00000399132 L1TD1Q5T7N2 865 aaKnown RBP17.97■□□□□ 0.47
COL25A1-203ENST00000399132 CAVIN1Q6NZI2 390 aaKnown RBP17.97■□□□□ 0.47
COL25A1-203ENST00000399132 ZSWIM6Q9HCJ5 1215 aa17.97■□□□□ 0.47
COL25A1-203ENST00000399132 SEC31BQ9NQW1 1179 aa17.97■□□□□ 0.47
COL25A1-203ENST00000399132 RBM27Q9P2N5 1060 aaKnown RBP17.97■□□□□ 0.47
COL25A1-203ENST00000399132 ZAP70P43403 619 aa17.96■□□□□ 0.47
COL25A1-203ENST00000399132 CCDC158Q5M9N0 1113 aa17.96■□□□□ 0.47
COL25A1-203ENST00000399132 TPCN1Q9ULQ1 816 aa17.96■□□□□ 0.47
COL25A1-203ENST00000399132 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.96■□□□□ 0.47
COL25A1-203ENST00000399132 ANKRD18BA2A2Z9 1011 aa17.96■□□□□ 0.47
COL25A1-203ENST00000399132 CSF1RP07333 972 aa17.96■□□□□ 0.47
COL25A1-203ENST00000399132 BLOC1S2Q6QNY1 142 aa17.96■□□□□ 0.47
COL25A1-203ENST00000399132 NSFL1CQ9UNZ2 370 aaKnown RBP17.96■□□□□ 0.47
COL25A1-203ENST00000399132 PALLDQ8WX93 1383 aa17.96■□□□□ 0.47
COL25A1-203ENST00000399132 ATP2B3Q16720 1220 aa17.95■□□□□ 0.46
COL25A1-203ENST00000399132 GAS2L3Q86XJ1 694 aa17.95■□□□□ 0.46
COL25A1-203ENST00000399132 CCDC24Q8N4L8 307 aa17.95■□□□□ 0.46
COL25A1-203ENST00000399132 SMC3Q9UQE7 1217 aa17.95■□□□□ 0.46
COL25A1-203ENST00000399132 NIP7Q9Y221 180 aaKnown RBP eCLIP17.95■□□□□ 0.46
COL25A1-203ENST00000399132 EIF5P55010 431 aaKnown RBP17.95■□□□□ 0.46
COL25A1-203ENST00000399132 RNF20Q5VTR2 975 aa17.95■□□□□ 0.46
COL25A1-203ENST00000399132 CHST3Q7LGC8 479 aa17.95■□□□□ 0.46
COL25A1-203ENST00000399132 LMBRD1Q9NUN5 540 aa17.95■□□□□ 0.46
COL25A1-203ENST00000399132 CIAO1O76071 339 aa17.94■□□□□ 0.46
COL25A1-203ENST00000399132 CYP21A2P08686 494 aa17.94■□□□□ 0.46
COL25A1-203ENST00000399132 TTLL5Q6EMB2 1281 aa17.94■□□□□ 0.46
COL25A1-203ENST00000399132 THRAP3Q9Y2W1 955 aaKnown RBP17.94■□□□□ 0.46
COL25A1-203ENST00000399132 EPB41L2O43491 1005 aaKnown RBP17.94■□□□□ 0.46
COL25A1-203ENST00000399132 BRD1O95696 1058 aa17.94■□□□□ 0.46
COL25A1-203ENST00000399132 CDCA7Q9BWT1 371 aaPredicted RBP17.94■□□□□ 0.46
COL25A1-203ENST00000399132 NAP1L2Q9ULW6 460 aaPredicted RBP17.94■□□□□ 0.46
COL25A1-203ENST00000399132 M0R2C6 588 aa17.93■□□□□ 0.46
COL25A1-203ENST00000399132 XRCC6P12956 609 aaKnown RBP eCLIP17.93■□□□□ 0.46
COL25A1-203ENST00000399132 GJB2P29033 226 aa17.93■□□□□ 0.46
COL25A1-203ENST00000399132 INTS4Q96HW7 963 aaKnown RBP17.93■□□□□ 0.46
COL25A1-203ENST00000399132 HAND2P61296 217 aa17.93■□□□□ 0.46
COL25A1-203ENST00000399132 ST3GAL1Q11201 340 aa17.93■□□□□ 0.46
COL25A1-203ENST00000399132 RIPOR2Q9Y4F9 1068 aa17.93■□□□□ 0.46
COL25A1-203ENST00000399132 VPS37CA5D8V6 355 aaPredicted RBP17.92■□□□□ 0.46
COL25A1-203ENST00000399132 PDE8AO60658 829 aa17.92■□□□□ 0.46
COL25A1-203ENST00000399132 ZNF34Q8IZ26 560 aa17.92■□□□□ 0.46
COL25A1-203ENST00000399132 OSBP2Q969R2 916 aa17.92■□□□□ 0.46
COL25A1-203ENST00000399132 IL17RAQ96F46 866 aa17.92■□□□□ 0.46
COL25A1-203ENST00000399132 AKAP2Q9Y2D5 859 aa17.92■□□□□ 0.46
COL25A1-203ENST00000399132 COL22A1Q8NFW1 1626 aaPredicted RBP17.92■□□□□ 0.46
COL25A1-203ENST00000399132 HSP90B1P14625 803 aaKnown RBP17.92■□□□□ 0.46
COL25A1-203ENST00000399132 SYT1P21579 422 aa17.92■□□□□ 0.46
COL25A1-203ENST00000399132 GPT2Q8TD30 523 aa17.92■□□□□ 0.46
COL25A1-203ENST00000399132 GPR108Q9NPR9 543 aa17.92■□□□□ 0.46
COL25A1-203ENST00000399132 PSMA5P28066 241 aa17.91■□□□□ 0.46
COL25A1-203ENST00000399132 MAST3O60307 1309 aa17.91■□□□□ 0.46
COL25A1-203ENST00000399132 CAMTA2O94983 1202 aa17.91■□□□□ 0.46
COL25A1-203ENST00000399132 RPS6KB1P23443 525 aa17.91■□□□□ 0.46
COL25A1-203ENST00000399132 MCAMP43121 646 aa17.91■□□□□ 0.46
COL25A1-203ENST00000399132 FOSBP53539 338 aa17.91■□□□□ 0.46
COL25A1-203ENST00000399132 STOX1Q6ZVD7 989 aa17.91■□□□□ 0.46
COL25A1-203ENST00000399132 LINC00116Q8NCU8 138 aa17.91■□□□□ 0.46
COL25A1-203ENST00000399132 PLA2G12BQ9BX93 195 aa17.91■□□□□ 0.46
COL25A1-203ENST00000399132 PDCL3Q9H2J4 239 aa17.91■□□□□ 0.46
COL25A1-203ENST00000399132 IQSEC3Q9UPP2 1182 aaPredicted RBP17.91■□□□□ 0.46
COL25A1-203ENST00000399132 RPAP1Q9BWH6 1393 aaPredicted RBP17.91■□□□□ 0.46
COL25A1-203ENST00000399132 LRP6O75581 1613 aa17.9■□□□□ 0.46
COL25A1-203ENST00000399132 RNF113AO15541 343 aaKnown RBP17.9■□□□□ 0.46
COL25A1-203ENST00000399132 PHKA1P46020 1223 aa17.9■□□□□ 0.46
COL25A1-203ENST00000399132 SKOR2Q2VWA4 1001 aaPredicted RBP17.9■□□□□ 0.46
COL25A1-203ENST00000399132 FERMT3Q86UX7 667 aa17.9■□□□□ 0.46
COL25A1-203ENST00000399132 DHX37Q8IY37 1157 aaKnown RBP17.9■□□□□ 0.46
COL25A1-203ENST00000399132 NEK1Q96PY6 1258 aa17.9■□□□□ 0.46
COL25A1-203ENST00000399132 TAOK2Q9UL54 1235 aa17.9■□□□□ 0.46
COL25A1-203ENST00000399132 WTIPA6NIX2 430 aaPredicted RBP17.9■□□□□ 0.46
COL25A1-203ENST00000399132 ERVV-1B6SEH8 477 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms