RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 ZC3H6P61129 1189 aaKnown RBP9.54□□□□□ -0.88
SPTLC3-201ENST00000399002 CCT2P78371 535 aaKnown RBP9.54□□□□□ -0.88
SPTLC3-201ENST00000399002 MPRIPQ6WCQ1 1025 aa9.54□□□□□ -0.88
SPTLC3-201ENST00000399002 PIBF1Q8WXW3 757 aa9.54□□□□□ -0.88
SPTLC3-201ENST00000399002 GOLGA1Q92805 767 aa9.54□□□□□ -0.88
SPTLC3-201ENST00000399002 RTL1A6NKG5 1358 aa9.54□□□□□ -0.88
SPTLC3-201ENST00000399002 ZMYM3Q14202 1370 aa9.54□□□□□ -0.88
SPTLC3-201ENST00000399002 TRIM14Q14142 442 aa9.54□□□□□ -0.88
SPTLC3-201ENST00000399002 RNF187Q5TA31 235 aaPredicted RBP9.54□□□□□ -0.88
SPTLC3-201ENST00000399002 CCDC174Q6PII3 467 aa9.54□□□□□ -0.88
SPTLC3-201ENST00000399002 KRT28Q7Z3Y7 464 aa9.54□□□□□ -0.88
SPTLC3-201ENST00000399002 RIMS2Q9UQ26 1411 aa9.53□□□□□ -0.88
SPTLC3-201ENST00000399002 PDE1AP54750 535 aa9.53□□□□□ -0.88
SPTLC3-201ENST00000399002 KIAA0753Q2KHM9 967 aa9.53□□□□□ -0.88
SPTLC3-201ENST00000399002 RRAGBQ5VZM2 374 aa9.53□□□□□ -0.88
SPTLC3-201ENST00000399002 MAATS1Q7Z4T9 603 aa9.53□□□□□ -0.88
SPTLC3-201ENST00000399002 CTNNBL1Q8WYA6 563 aaPredicted RBP9.53□□□□□ -0.88
SPTLC3-201ENST00000399002 CCDC77Q9BR77 488 aa9.53□□□□□ -0.88
SPTLC3-201ENST00000399002 TMCO5BA8MYB1 307 aa9.53□□□□□ -0.88
SPTLC3-201ENST00000399002 PSMA7O14818 248 aa9.53□□□□□ -0.88
SPTLC3-201ENST00000399002 KRT13P13646 458 aa9.53□□□□□ -0.88
SPTLC3-201ENST00000399002 SDSP20132 328 aa9.53□□□□□ -0.88
SPTLC3-201ENST00000399002 IFIT1BQ5T764 474 aaKnown RBP9.53□□□□□ -0.88
SPTLC3-201ENST00000399002 SYCP3Q8IZU3 236 aa9.53□□□□□ -0.88
SPTLC3-201ENST00000399002 WDR7Q9Y4E6 1490 aa9.53□□□□□ -0.88
SPTLC3-201ENST00000399002 ABCC10Q5T3U5 1492 aa9.53□□□□□ -0.88
SPTLC3-201ENST00000399002 FLT4P35916 1363 aa9.53□□□□□ -0.88
SPTLC3-201ENST00000399002 MAP3K5Q99683 1374 aa9.53□□□□□ -0.88
SPTLC3-201ENST00000399002 C11orf95C9JLR9 678 aaPredicted RBP9.53□□□□□ -0.88
SPTLC3-201ENST00000399002 PLCG2P16885 1265 aa9.53□□□□□ -0.88
SPTLC3-201ENST00000399002 CBX1P83916 185 aa9.53□□□□□ -0.88
SPTLC3-201ENST00000399002 KSR2Q6VAB6 950 aa9.53□□□□□ -0.88
SPTLC3-201ENST00000399002 CTAGE9A4FU28 777 aa9.53□□□□□ -0.88
SPTLC3-201ENST00000399002 HLTFQ14527 1009 aaKnown RBP eCLIP9.53□□□□□ -0.886e-6■■■■□ 22
SPTLC3-201ENST00000399002 RAB3GAP1Q15042 981 aa9.53□□□□□ -0.88
SPTLC3-201ENST00000399002 CCDC129Q6ZRS4 1044 aa9.53□□□□□ -0.88
SPTLC3-201ENST00000399002 ALG1Q9BT22 464 aa9.53□□□□□ -0.88
SPTLC3-201ENST00000399002 PHF23Q9BUL5 403 aaPredicted RBP9.53□□□□□ -0.88
SPTLC3-201ENST00000399002 CFAP74Q9C0B2 1584 aa9.53□□□□□ -0.88
SPTLC3-201ENST00000399002 ACEP12821 1306 aa9.53□□□□□ -0.88
SPTLC3-201ENST00000399002 N4BP3O15049 544 aa9.52□□□□□ -0.88
SPTLC3-201ENST00000399002 MYO1BO43795 1136 aa9.52□□□□□ -0.88
SPTLC3-201ENST00000399002 KRT2P35908 639 aa9.52□□□□□ -0.88
SPTLC3-201ENST00000399002 GUCY1B3Q02153 619 aa9.52□□□□□ -0.88
SPTLC3-201ENST00000399002 LDHAL6AQ6ZMR3 332 aa9.52□□□□□ -0.88
SPTLC3-201ENST00000399002 JADE2Q9NQC1 790 aa9.52□□□□□ -0.88
SPTLC3-201ENST00000399002 HELLSQ9NRZ9 838 aa9.52□□□□□ -0.88
SPTLC3-201ENST00000399002 IGHDP01880 384 aa9.52□□□□□ -0.89
SPTLC3-201ENST00000399002 ACTN2P35609 894 aa9.52□□□□□ -0.89
SPTLC3-201ENST00000399002 ANO6Q4KMQ2 910 aa9.52□□□□□ -0.89
SPTLC3-201ENST00000399002 CEP63Q96MT8 703 aa9.52□□□□□ -0.89
SPTLC3-201ENST00000399002 IKBKGQ9Y6K9 419 aa9.52□□□□□ -0.89
SPTLC3-201ENST00000399002 KLF18A0A0U1RQI7 1052 aa9.52□□□□□ -0.89
SPTLC3-201ENST00000399002 GNG11P61952 73 aa9.52□□□□□ -0.89
SPTLC3-201ENST00000399002 ZNF804AQ7Z570 1209 aa9.52□□□□□ -0.89
SPTLC3-201ENST00000399002 C6orf50Q9HD87 102 aa9.52□□□□□ -0.89
SPTLC3-201ENST00000399002 BCCIPQ9P287 314 aaKnown RBP eCLIP9.52□□□□□ -0.89
SPTLC3-201ENST00000399002 COL17A1Q9UMD9 1497 aaPredicted RBP9.52□□□□□ -0.89
SPTLC3-201ENST00000399002 B4DLN1 442 aa9.52□□□□□ -0.89
SPTLC3-201ENST00000399002 PRC1O43663 620 aa9.52□□□□□ -0.89
SPTLC3-201ENST00000399002 MRPL12P52815 198 aaKnown RBP9.52□□□□□ -0.89
SPTLC3-201ENST00000399002 ANKRD13DQ6ZTN6 518 aa9.52□□□□□ -0.89
SPTLC3-201ENST00000399002 CERS3Q8IU89 383 aa9.52□□□□□ -0.89
SPTLC3-201ENST00000399002 TSPY3P0CV98 308 aa9.52□□□□□ -0.89
SPTLC3-201ENST00000399002 TSPY8P0CW00 308 aa9.52□□□□□ -0.89
SPTLC3-201ENST00000399002 NDC80O14777 642 aa9.51□□□□□ -0.89
SPTLC3-201ENST00000399002 HSPA4P34932 840 aa9.51□□□□□ -0.89
SPTLC3-201ENST00000399002 NOLC1Q14978 699 aaKnown RBP eCLIP9.51□□□□□ -0.89
SPTLC3-201ENST00000399002 CLUL1Q15846 466 aa9.51□□□□□ -0.89
SPTLC3-201ENST00000399002 SPECC1Q5M775 1068 aa9.51□□□□□ -0.89
SPTLC3-201ENST00000399002 USP48Q86UV5 1035 aa9.51□□□□□ -0.89
SPTLC3-201ENST00000399002 RBM8AQ9Y5S9 174 aaKnown RBP9.51□□□□□ -0.89
SPTLC3-201ENST00000399002 RNF113AO15541 343 aaKnown RBP9.51□□□□□ -0.89
SPTLC3-201ENST00000399002 ANKS4BQ8N8V4 417 aa9.51□□□□□ -0.89
SPTLC3-201ENST00000399002 ARFGAP3Q9NP61 516 aa9.51□□□□□ -0.89
SPTLC3-201ENST00000399002 MSH6P52701 1360 aa9.51□□□□□ -0.89
SPTLC3-201ENST00000399002 KRT86O43790 486 aa9.51□□□□□ -0.89
SPTLC3-201ENST00000399002 KIF4AO95239 1232 aa9.51□□□□□ -0.89
SPTLC3-201ENST00000399002 MSANTD4Q8NCY6 345 aa9.51□□□□□ -0.89
SPTLC3-201ENST00000399002 TIGD1Q96MW7 591 aa9.51□□□□□ -0.89
SPTLC3-201ENST00000399002 TRMT1Q9NXH9 659 aaKnown RBP9.51□□□□□ -0.89
SPTLC3-201ENST00000399002 A6NNZ2 444 aa9.51□□□□□ -0.89
SPTLC3-201ENST00000399002 GRM8O00222 908 aa9.51□□□□□ -0.89
SPTLC3-201ENST00000399002 TUBB8Q3ZCM7 444 aa9.51□□□□□ -0.89
SPTLC3-201ENST00000399002 MPNDQ8N594 471 aa9.51□□□□□ -0.89
SPTLC3-201ENST00000399002 NPATQ14207 1427 aa9.51□□□□□ -0.89
SPTLC3-201ENST00000399002 SLU7O95391 586 aaKnown RBP9.51□□□□□ -0.89
SPTLC3-201ENST00000399002 NOP2P46087 812 aaKnown RBP9.51□□□□□ -0.89
SPTLC3-201ENST00000399002 USHBP1Q8N6Y0 703 aa9.51□□□□□ -0.89
SPTLC3-201ENST00000399002 CPLX3Q8WVH0 158 aa9.51□□□□□ -0.89
SPTLC3-201ENST00000399002 HDAC9Q9UKV0 1011 aa9.51□□□□□ -0.89
SPTLC3-201ENST00000399002 PABPN1LA6NDY0 278 aaKnown RBP9.5□□□□□ -0.89
SPTLC3-201ENST00000399002 ATP2A1O14983 1001 aa9.5□□□□□ -0.89
SPTLC3-201ENST00000399002 JAKMIP2Q96AA8 810 aa9.5□□□□□ -0.89
SPTLC3-201ENST00000399002 HOMER2Q9NSB8 354 aa9.5□□□□□ -0.89
SPTLC3-201ENST00000399002 ZKSCAN5Q9Y2L8 839 aa9.5□□□□□ -0.89
SPTLC3-201ENST00000399002 PI4KAP2A4QPH2 592 aa9.5□□□□□ -0.89
SPTLC3-201ENST00000399002 Q6ZUG5 572 aa9.5□□□□□ -0.89
SPTLC3-201ENST00000399002 PI4KAP1Q8N8J0 262 aa9.5□□□□□ -0.89
SPTLC3-201ENST00000399002 ANKRD2Q9GZV1 360 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms