RNA–Protein interactions for RNA: ENST00000398844.6

SEC24A-202, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SEC24A, Length 6,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-202ENST00000398844 NCOA7Q8NI08 942 aa10.59□□□□□ -0.71
SEC24A-202ENST00000398844 A0A1B0GUL7 405 aa10.59□□□□□ -0.71
SEC24A-202ENST00000398844 IRS4O14654 1257 aaPredicted RBP10.59□□□□□ -0.71
SEC24A-202ENST00000398844 RIMBP3CA6NJZ7 1639 aa10.59□□□□□ -0.71
SEC24A-202ENST00000398844 RIMBP3BA6NNM3 1639 aa10.59□□□□□ -0.71
SEC24A-202ENST00000398844 RIMBP3Q9UFD9 1639 aa10.59□□□□□ -0.71
SEC24A-202ENST00000398844 IGSF1Q8N6C5 1336 aa10.59□□□□□ -0.71
SEC24A-202ENST00000398844 KDRP35968 1356 aa10.59□□□□□ -0.71
SEC24A-202ENST00000398844 PRC1O43663 620 aa10.59□□□□□ -0.71
SEC24A-202ENST00000398844 GCKRQ14397 625 aa10.59□□□□□ -0.71
SEC24A-202ENST00000398844 SCAND2PQ9GZW5 306 aaPredicted RBP10.59□□□□□ -0.71
SEC24A-202ENST00000398844 CDC42BPGQ6DT37 1551 aa10.59□□□□□ -0.71
SEC24A-202ENST00000398844 ME3Q16798 604 aa10.59□□□□□ -0.71
SEC24A-202ENST00000398844 LUZP1Q86V48 1076 aa10.59□□□□□ -0.71
SEC24A-202ENST00000398844 CEP57L1Q8IYX8 460 aa10.59□□□□□ -0.71
SEC24A-202ENST00000398844 PPP1R1BQ9UD71 204 aaPredicted RBP10.59□□□□□ -0.71
SEC24A-202ENST00000398844 DEPDC5O75140 1603 aa10.59□□□□□ -0.71
SEC24A-202ENST00000398844 PTCH1Q13635 1447 aa10.59□□□□□ -0.71
SEC24A-202ENST00000398844 GAS2L3Q86XJ1 694 aa10.59□□□□□ -0.71
SEC24A-202ENST00000398844 HMG20BQ9P0W2 317 aa10.59□□□□□ -0.71
SEC24A-202ENST00000398844 NIP7Q9Y221 180 aaKnown RBP eCLIP10.59□□□□□ -0.71
SEC24A-202ENST00000398844 ADCK5Q3MIX3 580 aa10.58□□□□□ -0.72
SEC24A-202ENST00000398844 CFAP100Q494V2 611 aa10.58□□□□□ -0.72
SEC24A-202ENST00000398844 ERCC4Q92889 916 aaPredicted RBP10.58□□□□□ -0.72
SEC24A-202ENST00000398844 ANTXR1Q9H6X2 564 aa10.58□□□□□ -0.72
SEC24A-202ENST00000398844 MAP2P11137 1827 aaKnown RBP10.58□□□□□ -0.72
SEC24A-202ENST00000398844 PTPDC1A2A3K4 754 aa10.58□□□□□ -0.72
SEC24A-202ENST00000398844 PHKG2P15735 406 aa10.58□□□□□ -0.72
SEC24A-202ENST00000398844 ANKRD20A12PQ8NF67 263 aa10.58□□□□□ -0.72
SEC24A-202ENST00000398844 CPLX3Q8WVH0 158 aa10.58□□□□□ -0.72
SEC24A-202ENST00000398844 ZHX3Q9H4I2 956 aa10.58□□□□□ -0.72
SEC24A-202ENST00000398844 KAT6BQ8WYB5 2073 aa10.58□□□□□ -0.72
SEC24A-202ENST00000398844 ITGA6P23229 1130 aa10.58□□□□□ -0.72
SEC24A-202ENST00000398844 C8orf37Q96NL8 207 aa10.58□□□□□ -0.72
SEC24A-202ENST00000398844 CTDSPL2Q05D32 466 aa10.58□□□□□ -0.72
SEC24A-202ENST00000398844 LRRC24Q50LG9 513 aa10.58□□□□□ -0.72
SEC24A-202ENST00000398844 TMC6Q7Z403 805 aa10.58□□□□□ -0.72
SEC24A-202ENST00000398844 DZIP1Q86YF9 867 aaKnown RBP10.58□□□□□ -0.72
SEC24A-202ENST00000398844 XAGE2Q96GT9 111 aa10.58□□□□□ -0.72
SEC24A-202ENST00000398844 CBX1P83916 185 aa10.58□□□□□ -0.72
SEC24A-202ENST00000398844 PLBD2Q8NHP8 589 aa10.58□□□□□ -0.72
SEC24A-202ENST00000398844 MYL10Q9BUA6 226 aa10.58□□□□□ -0.72
SEC24A-202ENST00000398844 VAT1LQ9HCJ6 419 aa10.58□□□□□ -0.72
SEC24A-202ENST00000398844 ITSN1Q15811 1721 aa10.58□□□□□ -0.72
SEC24A-202ENST00000398844 SKIDA1Q1XH10 827 aa10.57□□□□□ -0.72
SEC24A-202ENST00000398844 NGLY1Q96IV0 654 aa10.57□□□□□ -0.72
SEC24A-202ENST00000398844 TMEM63CQ9P1W3 806 aa10.57□□□□□ -0.72
SEC24A-202ENST00000398844 FRMPD1Q5SYB0 1578 aa10.57□□□□□ -0.72
SEC24A-202ENST00000398844 MFSD6Q6ZSS7 791 aa10.57□□□□□ -0.72
SEC24A-202ENST00000398844 CDK5RAP3Q96JB5 506 aa10.57□□□□□ -0.72
SEC24A-202ENST00000398844 KIF24Q5T7B8 1368 aa10.57□□□□□ -0.72
SEC24A-202ENST00000398844 CYP7A1P22680 504 aa10.57□□□□□ -0.72
SEC24A-202ENST00000398844 IL15P40933 162 aaPredicted RBP10.57□□□□□ -0.72
SEC24A-202ENST00000398844 HSPA4P34932 840 aa10.57□□□□□ -0.72
SEC24A-202ENST00000398844 EAF2Q96CJ1 260 aaPredicted RBP10.57□□□□□ -0.72
SEC24A-202ENST00000398844 NSFL1CQ9UNZ2 370 aaKnown RBP10.57□□□□□ -0.72
SEC24A-202ENST00000398844 ARHGEF40Q8TER5 1519 aa10.57□□□□□ -0.72
SEC24A-202ENST00000398844 MCM5P33992 734 aa10.57□□□□□ -0.72
SEC24A-202ENST00000398844 SPECC1Q5M775 1068 aa10.57□□□□□ -0.72
SEC24A-202ENST00000398844 ALG1Q9BT22 464 aa10.57□□□□□ -0.72
SEC24A-202ENST00000398844 JMYQ8N9B5 988 aa10.56□□□□□ -0.72
SEC24A-202ENST00000398844 CNNM3Q8NE01 707 aa10.56□□□□□ -0.72
SEC24A-202ENST00000398844 ARMT1Q9H993 441 aa10.56□□□□□ -0.72
SEC24A-202ENST00000398844 SPDYE4A6NLX3 237 aa10.56□□□□□ -0.72
SEC24A-202ENST00000398844 AOPEPQ8N6M6 819 aa10.56□□□□□ -0.72
SEC24A-202ENST00000398844 CCDC47Q96A33 483 aaKnown RBP10.56□□□□□ -0.72
SEC24A-202ENST00000398844 RAD50Q92878 1312 aa10.56□□□□□ -0.72
SEC24A-202ENST00000398844 F8W031 263 aaPredicted RBP10.56□□□□□ -0.72
SEC24A-202ENST00000398844 TPCN1Q9ULQ1 816 aa10.56□□□□□ -0.72
SEC24A-202ENST00000398844 ZNF652Q9Y2D9 606 aa10.56□□□□□ -0.72
SEC24A-202ENST00000398844 AXIN2Q9Y2T1 843 aa10.56□□□□□ -0.72
SEC24A-202ENST00000398844 STX1AQ16623 288 aa10.56□□□□□ -0.72
SEC24A-202ENST00000398844 ZNF589Q86UQ0 364 aaPredicted RBP10.56□□□□□ -0.72
SEC24A-202ENST00000398844 RASEFQ8IZ41 740 aa10.56□□□□□ -0.72
SEC24A-202ENST00000398844 MKNK2Q9HBH9 465 aa10.56□□□□□ -0.72
SEC24A-202ENST00000398844 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.56□□□□□ -0.727e-7■■■■□ 24.5
SEC24A-202ENST00000398844 CCDC112Q8NEF3 446 aa10.56□□□□□ -0.72
SEC24A-202ENST00000398844 PUS3Q9BZE2 481 aaKnown RBP10.56□□□□□ -0.72
SEC24A-202ENST00000398844 ARHGAP31Q2M1Z3 1444 aa10.56□□□□□ -0.72
SEC24A-202ENST00000398844 LARGE1O95461 756 aa10.55□□□□□ -0.72
SEC24A-202ENST00000398844 ZSCAN29Q8IWY8 852 aaPredicted RBP10.55□□□□□ -0.72
SEC24A-202ENST00000398844 ADGRB1O14514 1584 aa10.55□□□□□ -0.72
SEC24A-202ENST00000398844 ZAP70P43403 619 aa10.55□□□□□ -0.72
SEC24A-202ENST00000398844 AFMP43652 599 aa10.55□□□□□ -0.72
SEC24A-202ENST00000398844 CMTR1Q8N1G2 835 aaKnown RBP10.55□□□□□ -0.72
SEC24A-202ENST00000398844 SSH3Q8TE77 659 aa10.55□□□□□ -0.72
SEC24A-202ENST00000398844 ANO10Q9NW15 660 aa10.55□□□□□ -0.72
SEC24A-202ENST00000398844 B4E1Z4 1266 aa10.55□□□□□ -0.72
SEC24A-202ENST00000398844 PTGS1P23219 599 aa10.55□□□□□ -0.72
SEC24A-202ENST00000398844 IARSP41252 1262 aaKnown RBP10.55□□□□□ -0.72
SEC24A-202ENST00000398844 ZNF165P49910 485 aa10.55□□□□□ -0.72
SEC24A-202ENST00000398844 TTF1Q15361 905 aaPredicted RBP10.55□□□□□ -0.72
SEC24A-202ENST00000398844 GOLGA6L1Q8N7Z2 621 aa10.55□□□□□ -0.72
SEC24A-202ENST00000398844 CAGE1Q8TC20 777 aa10.55□□□□□ -0.72
SEC24A-202ENST00000398844 UTP14AQ9BVJ6 771 aaKnown RBP10.55□□□□□ -0.72
SEC24A-202ENST00000398844 LSG1Q9H089 658 aaKnown RBP10.55□□□□□ -0.72
SEC24A-202ENST00000398844 TCEAL9Q9UHQ7 104 aa10.55□□□□□ -0.72
SEC24A-202ENST00000398844 A0A1B0GVL5 298 aa10.55□□□□□ -0.72
SEC24A-202ENST00000398844 TYRO3Q06418 890 aa10.55□□□□□ -0.72
SEC24A-202ENST00000398844 MAGEC2Q9UBF1 373 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms