RNA–Protein interactions for RNA: ENST00000398792.3

CDH23-204, Transcript of cadherin related 23, humanhuman

TSL 2

Gene CDH23, Length 1,649 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-204ENST00000398792 VGLL2Q8N8G2 317 aa20.46■□□□□ 0.87
CDH23-204ENST00000398792 CELF1Q92879 486 aaKnown RBP20.46■□□□□ 0.87
CDH23-204ENST00000398792 BRIP1Q9BX63 1249 aa20.46■□□□□ 0.87
CDH23-204ENST00000398792 TLR7Q9NYK1 1049 aaKnown RBP20.46■□□□□ 0.87
CDH23-204ENST00000398792 ARAP2Q8WZ64 1704 aa20.46■□□□□ 0.87
CDH23-204ENST00000398792 CCDC8Q9H0W5 538 aaPredicted RBP20.45■□□□□ 0.87
CDH23-204ENST00000398792 TTC41PQ6P2S7 1318 aa20.45■□□□□ 0.86
CDH23-204ENST00000398792 RPGRQ92834 1020 aaKnown RBP20.45■□□□□ 0.86
CDH23-204ENST00000398792 GPATCH3Q96I76 525 aa20.45■□□□□ 0.86
CDH23-204ENST00000398792 DBNLQ9UJU6 430 aaKnown RBP20.45■□□□□ 0.86
CDH23-204ENST00000398792 PI4K2BQ8TCG2 481 aa20.44■□□□□ 0.86
CDH23-204ENST00000398792 BSDC1Q9NW68 430 aaPredicted RBP20.44■□□□□ 0.86
CDH23-204ENST00000398792 AKAP2Q9Y2D5 859 aa20.44■□□□□ 0.86
CDH23-204ENST00000398792 A0A1B0GUL7 405 aa20.43■□□□□ 0.86
CDH23-204ENST00000398792 RPS8P62241 208 aaKnown RBP20.43■□□□□ 0.86
CDH23-204ENST00000398792 GRAPQ13588 217 aa20.43■□□□□ 0.86
CDH23-204ENST00000398792 ILDR2Q71H61 639 aa20.43■□□□□ 0.86
CDH23-204ENST00000398792 GRAPLQ8TC17 118 aaPredicted RBP20.43■□□□□ 0.86
CDH23-204ENST00000398792 ECHDC1Q9NTX5 307 aa20.43■□□□□ 0.86
CDH23-204ENST00000398792 C10orf71Q711Q0 1435 aa20.43■□□□□ 0.86
CDH23-204ENST00000398792 PDE8BO95263 885 aa20.42■□□□□ 0.86
CDH23-204ENST00000398792 R3HDM1Q15032 1099 aaKnown RBP20.42■□□□□ 0.86
CDH23-204ENST00000398792 DBNDD2Q9BQY9 259 aa20.42■□□□□ 0.86
CDH23-204ENST00000398792 HOXA10P31260 410 aaPredicted RBP20.42■□□□□ 0.86
CDH23-204ENST00000398792 PDE6BP35913 854 aa20.42■□□□□ 0.86
CDH23-204ENST00000398792 CHRNDQ07001 517 aa20.42■□□□□ 0.86
CDH23-204ENST00000398792 ATP2B3Q16720 1220 aa20.42■□□□□ 0.86
CDH23-204ENST00000398792 C8orf34Q49A92 452 aa20.42■□□□□ 0.86
CDH23-204ENST00000398792 LRRC37AA6NMS7 1700 aa20.41■□□□□ 0.86
CDH23-204ENST00000398792 RBM17Q96I25 401 aaKnown RBP20.41■□□□□ 0.86
CDH23-204ENST00000398792 ERC2O15083 957 aa20.4■□□□□ 0.86
CDH23-204ENST00000398792 GLRX3O76003 335 aaKnown RBP20.4■□□□□ 0.86
CDH23-204ENST00000398792 TIMM10P62072 90 aa20.4■□□□□ 0.86
CDH23-204ENST00000398792 PUM3Q15397 648 aaKnown RBP20.4■□□□□ 0.86
CDH23-204ENST00000398792 NEUROD6Q96NK8 337 aa20.4■□□□□ 0.86
CDH23-204ENST00000398792 SRGNP10124 158 aa20.39■□□□□ 0.86
CDH23-204ENST00000398792 HELBQ8NG08 1087 aaPredicted RBP20.39■□□□□ 0.86
CDH23-204ENST00000398792 CRAMP1Q96RY5 1269 aa20.39■□□□□ 0.86
CDH23-204ENST00000398792 MTFR1LQ9H019 292 aa20.39■□□□□ 0.86
CDH23-204ENST00000398792 MINPP1Q9UNW1 487 aa20.39■□□□□ 0.86
CDH23-204ENST00000398792 ZBTB7AO95365 584 aa20.38■□□□□ 0.85
CDH23-204ENST00000398792 FGFR2P21802 821 aa20.38■□□□□ 0.85
CDH23-204ENST00000398792 TAF5LO75529 589 aa20.38■□□□□ 0.85
CDH23-204ENST00000398792 NPR1P16066 1061 aa20.38■□□□□ 0.85
CDH23-204ENST00000398792 SDSP20132 328 aa20.38■□□□□ 0.85
CDH23-204ENST00000398792 XAGE2Q96GT9 111 aa20.38■□□□□ 0.85
CDH23-204ENST00000398792 KIF13BQ9NQT8 1826 aa20.38■□□□□ 0.85
CDH23-204ENST00000398792 ADORA1P30542 326 aa20.37■□□□□ 0.85
CDH23-204ENST00000398792 LPIN2Q92539 896 aa20.37■□□□□ 0.85
CDH23-204ENST00000398792 BACH2Q9BYV9 841 aa20.37■□□□□ 0.85
CDH23-204ENST00000398792 DLEC1Q9Y238 1755 aa20.37■□□□□ 0.85
CDH23-204ENST00000398792 ATP5JP18859 108 aa20.36■□□□□ 0.85
CDH23-204ENST00000398792 PSDA5PKW4 1024 aaPredicted RBP20.35■□□□□ 0.85
CDH23-204ENST00000398792 SLC5A1P13866 664 aa20.35■□□□□ 0.85
CDH23-204ENST00000398792 MASTLQ96GX5 879 aa20.35■□□□□ 0.85
CDH23-204ENST00000398792 ANKRD2Q9GZV1 360 aa20.35■□□□□ 0.85
CDH23-204ENST00000398792 AK9Q5TCS8 1911 aa20.35■□□□□ 0.85
CDH23-204ENST00000398792 C2CD5Q86YS7 1000 aa20.35■□□□□ 0.85
CDH23-204ENST00000398792 CACNA1SQ13698 1873 aa20.34■□□□□ 0.85
CDH23-204ENST00000398792 LTBP1Q14766 1721 aa20.34■□□□□ 0.85
CDH23-204ENST00000398792 SNAP23O00161 211 aa20.34■□□□□ 0.85
CDH23-204ENST00000398792 BBOX1O75936 387 aa20.34■□□□□ 0.85
CDH23-204ENST00000398792 SLC51AQ86UW1 340 aa20.34■□□□□ 0.85
CDH23-204ENST00000398792 TRIM6-TRIM34B2RNG4 842 aa20.33■□□□□ 0.84
CDH23-204ENST00000398792 H0YIN7 160 aa20.33■□□□□ 0.84
CDH23-204ENST00000398792 PPEF1O14829 653 aaPredicted RBP20.33■□□□□ 0.84
CDH23-204ENST00000398792 CDC45O75419 566 aa20.33■□□□□ 0.84
CDH23-204ENST00000398792 IFIT1P09914 478 aaKnown RBP20.33■□□□□ 0.84
CDH23-204ENST00000398792 POLD1P28340 1107 aa20.33■□□□□ 0.84
CDH23-204ENST00000398792 UBE4AQ14139 1066 aa20.33■□□□□ 0.84
CDH23-204ENST00000398792 CCDC158Q5M9N0 1113 aa20.33■□□□□ 0.84
CDH23-204ENST00000398792 GORABQ5T7V8 394 aa20.33■□□□□ 0.84
CDH23-204ENST00000398792 TMC4Q7Z404 712 aa20.33■□□□□ 0.84
CDH23-204ENST00000398792 BOLA2Q9H3K6 86 aa20.33■□□□□ 0.84
CDH23-204ENST00000398792 ATF5Q9Y2D1 282 aaPredicted RBP20.33■□□□□ 0.84
CDH23-204ENST00000398792 MAP4K4O95819 1239 aaPredicted RBP20.32■□□□□ 0.84
CDH23-204ENST00000398792 ALDH1B1P30837 517 aa20.32■□□□□ 0.84
CDH23-204ENST00000398792 STYK1Q6J9G0 422 aa20.32■□□□□ 0.84
CDH23-204ENST00000398792 CNTROBQ8N137 903 aa20.32■□□□□ 0.84
CDH23-204ENST00000398792 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.32■□□□□ 0.84
CDH23-204ENST00000398792 KIAA1551Q9HCM1 1747 aa20.32■□□□□ 0.84
CDH23-204ENST00000398792 TTC39AQ5SRH9 613 aa20.31■□□□□ 0.84
CDH23-204ENST00000398792 RILPL2Q969X0 211 aa20.31■□□□□ 0.84
CDH23-204ENST00000398792 XDHP47989 1333 aa20.31■□□□□ 0.84
CDH23-204ENST00000398792 CHRNA5P30532 468 aa20.31■□□□□ 0.84
CDH23-204ENST00000398792 TBC1D9Q6ZT07 1266 aa20.31■□□□□ 0.84
CDH23-204ENST00000398792 HAUS7Q99871 368 aa20.31■□□□□ 0.84
CDH23-204ENST00000398792 SGIP1Q9BQI5 828 aa20.31■□□□□ 0.84
CDH23-204ENST00000398792 KCNJ4P48050 445 aa20.3■□□□□ 0.84
CDH23-204ENST00000398792 CCDC102BQ68D86 513 aa20.3■□□□□ 0.84
CDH23-204ENST00000398792 ZNF622Q969S3 477 aaKnown RBP eCLIP20.3■□□□□ 0.84
CDH23-204ENST00000398792 ZNF512BQ96KM6 892 aaPredicted RBP20.3■□□□□ 0.84
CDH23-204ENST00000398792 ARID4AP29374 1257 aaPredicted RBP20.29■□□□□ 0.84
CDH23-204ENST00000398792 PHKA1P46020 1223 aa20.29■□□□□ 0.84
CDH23-204ENST00000398792 EVI5LQ96CN4 794 aa20.29■□□□□ 0.84
CDH23-204ENST00000398792 TSHZ2Q9NRE2 1034 aa20.29■□□□□ 0.84
CDH23-204ENST00000398792 ATP6V0A2Q9Y487 856 aa20.29■□□□□ 0.84
CDH23-204ENST00000398792 ZNF804BA4D1E1 1349 aa20.29■□□□□ 0.84
CDH23-204ENST00000398792 WTIPA6NIX2 430 aaPredicted RBP20.28■□□□□ 0.84
CDH23-204ENST00000398792 GPSM2P81274 684 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms