RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 EPHA10Q5JZY3 1008 aa23.64■■□□□ 1.37
COLCA2-201ENST00000398035 ZKSCAN2Q63HK3 967 aa23.64■■□□□ 1.37
COLCA2-201ENST00000398035 INTS3Q68E01 1043 aaKnown RBP23.64■■□□□ 1.37
COLCA2-201ENST00000398035 SUCLG2Q96I99 432 aa23.64■■□□□ 1.37
COLCA2-201ENST00000398035 SBF1O95248 1867 aa23.63■■□□□ 1.37
COLCA2-201ENST00000398035 UFL1O94874 794 aa23.63■■□□□ 1.37
COLCA2-201ENST00000398035 RABL6Q3YEC7 729 aaPredicted RBP23.63■■□□□ 1.37
COLCA2-201ENST00000398035 TAF7LQ5H9L4 462 aa23.63■■□□□ 1.37
COLCA2-201ENST00000398035 LEMD3Q9Y2U8 911 aa23.63■■□□□ 1.37
COLCA2-201ENST00000398035 G3V3G9 751 aa23.62■■□□□ 1.37
COLCA2-201ENST00000398035 TNIP1Q15025 636 aa23.62■■□□□ 1.37
COLCA2-201ENST00000398035 DCAF8Q5TAQ9 597 aa23.62■■□□□ 1.37
COLCA2-201ENST00000398035 UBTFL1P0CB47 393 aaPredicted RBP23.61■■□□□ 1.37
COLCA2-201ENST00000398035 TRIM27P14373 513 aa23.61■■□□□ 1.37
COLCA2-201ENST00000398035 RBM46Q8TBY0 533 aaKnown RBP23.61■■□□□ 1.37
COLCA2-201ENST00000398035 KAZALD1Q96I82 304 aa23.61■■□□□ 1.37
COLCA2-201ENST00000398035 LAMB2P55268 1798 aa23.61■■□□□ 1.37
COLCA2-201ENST00000398035 LDHAL6AQ6ZMR3 332 aa23.6■■□□□ 1.37
COLCA2-201ENST00000398035 BICC1Q9H694 974 aaKnown RBP23.6■■□□□ 1.37
COLCA2-201ENST00000398035 ZNF541Q9H0D2 1346 aa23.6■■□□□ 1.37
COLCA2-201ENST00000398035 POTECB2RU33 542 aa23.59■■□□□ 1.37
COLCA2-201ENST00000398035 RIMBP2O15034 1052 aa23.59■■□□□ 1.37
COLCA2-201ENST00000398035 GNAI3P08754 354 aa23.59■■□□□ 1.37
COLCA2-201ENST00000398035 CXCL9Q07325 125 aa23.59■■□□□ 1.37
COLCA2-201ENST00000398035 CIAPIN1Q6FI81 312 aa23.59■■□□□ 1.37
COLCA2-201ENST00000398035 HACL1Q9UJ83 578 aa23.59■■□□□ 1.37
COLCA2-201ENST00000398035 GJA3Q9Y6H8 435 aa23.59■■□□□ 1.37
COLCA2-201ENST00000398035 CACNA1SQ13698 1873 aa23.58■■□□□ 1.37
COLCA2-201ENST00000398035 CHRNDQ07001 517 aa23.58■■□□□ 1.36
COLCA2-201ENST00000398035 CNNM1Q9NRU3 951 aa23.58■■□□□ 1.36
COLCA2-201ENST00000398035 LMOD1P29536 600 aaPredicted RBP23.57■■□□□ 1.36
COLCA2-201ENST00000398035 FSTL1Q12841 308 aa23.57■■□□□ 1.36
COLCA2-201ENST00000398035 PNMA8AQ86V59 439 aaPredicted RBP23.57■■□□□ 1.36
COLCA2-201ENST00000398035 KCNJ4P48050 445 aa23.56■■□□□ 1.36
COLCA2-201ENST00000398035 PODNQ7Z5L7 613 aa23.56■■□□□ 1.36
COLCA2-201ENST00000398035 ANKRD44Q8N8A2 993 aa23.56■■□□□ 1.36
COLCA2-201ENST00000398035 SMC1BQ8NDV3 1235 aa23.56■■□□□ 1.36
COLCA2-201ENST00000398035 ZNF804BA4D1E1 1349 aa23.56■■□□□ 1.36
COLCA2-201ENST00000398035 ECE2O60344 883 aa23.55■■□□□ 1.36
COLCA2-201ENST00000398035 MS4A1P11836 297 aa23.55■■□□□ 1.36
COLCA2-201ENST00000398035 DBNDD1Q9H9R9 158 aa23.55■■□□□ 1.36
COLCA2-201ENST00000398035 DOK7Q18PE1 504 aa23.54■■□□□ 1.36
COLCA2-201ENST00000398035 FTSJ3Q8IY81 847 aaKnown RBP23.54■■□□□ 1.36
COLCA2-201ENST00000398035 CLUAP1Q96AJ1 413 aa23.54■■□□□ 1.36
COLCA2-201ENST00000398035 ZNF594Q96JF6 807 aaPredicted RBP23.54■■□□□ 1.36
COLCA2-201ENST00000398035 TAF1DQ9H5J8 278 aaPredicted RBP23.54■■□□□ 1.36
COLCA2-201ENST00000398035 RAD17O75943 681 aa23.53■■□□□ 1.36
COLCA2-201ENST00000398035 DZIP1LQ8IYY4 767 aaKnown RBP23.53■■□□□ 1.36
COLCA2-201ENST00000398035 MED23Q9ULK4 1368 aa23.53■■□□□ 1.36
COLCA2-201ENST00000398035 LRRC37AA6NMS7 1700 aa23.52■■□□□ 1.36
COLCA2-201ENST00000398035 YDJCA8MPS7 323 aa23.52■■□□□ 1.36
COLCA2-201ENST00000398035 EPHX2P34913 555 aa23.52■■□□□ 1.36
COLCA2-201ENST00000398035 COA1Q9GZY4 146 aa23.52■■□□□ 1.36
COLCA2-201ENST00000398035 MROH5Q6ZUA9 1318 aa23.52■■□□□ 1.36
COLCA2-201ENST00000398035 DICER1Q9UPY3 1922 aaKnown RBP23.52■■□□□ 1.35
COLCA2-201ENST00000398035 DPF2Q92785 391 aa23.51■■□□□ 1.35
COLCA2-201ENST00000398035 GPR101Q96P66 508 aaPredicted RBP23.51■■□□□ 1.35
COLCA2-201ENST00000398035 MEIS3Q99687 375 aa23.51■■□□□ 1.35
COLCA2-201ENST00000398035 FBXO3Q9UK99 471 aa23.51■■□□□ 1.35
COLCA2-201ENST00000398035 COL4A1P02462 1669 aa23.51■■□□□ 1.35
COLCA2-201ENST00000398035 RPS12P25398 132 aaKnown RBP23.5■■□□□ 1.35
COLCA2-201ENST00000398035 C15orf52Q6ZUT6 534 aaKnown RBP23.5■■□□□ 1.35
COLCA2-201ENST00000398035 RCAN3Q9UKA8 241 aa23.5■■□□□ 1.35
COLCA2-201ENST00000398035 RIPOR2Q9Y4F9 1068 aa23.5■■□□□ 1.35
COLCA2-201ENST00000398035 DUOX1Q9NRD9 1551 aa23.5■■□□□ 1.35
COLCA2-201ENST00000398035 COL4A5P29400 1685 aa23.5■■□□□ 1.35
COLCA2-201ENST00000398035 TIAM2Q8IVF5 1701 aa23.5■■□□□ 1.35
COLCA2-201ENST00000398035 WDR90Q96KV7 1748 aa23.5■■□□□ 1.35
COLCA2-201ENST00000398035 TAF5LO75529 589 aa23.5■■□□□ 1.35
COLCA2-201ENST00000398035 SCNN1DP51172 638 aa23.5■■□□□ 1.35
COLCA2-201ENST00000398035 GPRC5DQ9NZD1 345 aa23.5■■□□□ 1.35
COLCA2-201ENST00000398035 LRRFIP2Q9Y608 721 aaKnown RBP23.5■■□□□ 1.35
COLCA2-201ENST00000398035 GNAI2P04899 355 aa23.49■■□□□ 1.35
COLCA2-201ENST00000398035 VIL1P09327 827 aaKnown RBP23.49■■□□□ 1.35
COLCA2-201ENST00000398035 UBE4AQ14139 1066 aa23.49■■□□□ 1.35
COLCA2-201ENST00000398035 USP50Q70EL3 339 aaPredicted RBP23.49■■□□□ 1.35
COLCA2-201ENST00000398035 LDHDQ86WU2 507 aa23.49■■□□□ 1.35
COLCA2-201ENST00000398035 TMEM57Q8N5G2 664 aa23.49■■□□□ 1.35
COLCA2-201ENST00000398035 HELBQ8NG08 1087 aaPredicted RBP23.49■■□□□ 1.35
COLCA2-201ENST00000398035 TAF1P21675 1872 aa23.48■■□□□ 1.35
COLCA2-201ENST00000398035 CCDC88AQ3V6T2 1871 aa23.48■■□□□ 1.35
COLCA2-201ENST00000398035 PSMD14O00487 310 aa23.48■■□□□ 1.35
COLCA2-201ENST00000398035 PLIN1O60240 522 aa23.48■■□□□ 1.35
COLCA2-201ENST00000398035 GMPSP49915 693 aaPredicted RBP23.48■■□□□ 1.35
COLCA2-201ENST00000398035 ADARB2Q9NS39 739 aaKnown RBP23.48■■□□□ 1.35
COLCA2-201ENST00000398035 WTIPA6NIX2 430 aaPredicted RBP23.47■■□□□ 1.35
COLCA2-201ENST00000398035 H7C1D1 291 aa23.47■■□□□ 1.35
COLCA2-201ENST00000398035 EAPPQ56P03 285 aaPredicted RBP23.47■■□□□ 1.35
COLCA2-201ENST00000398035 CHADLQ6NUI6 762 aa23.47■■□□□ 1.35
COLCA2-201ENST00000398035 PUS3Q9BZE2 481 aaKnown RBP23.47■■□□□ 1.35
COLCA2-201ENST00000398035 USP17L3A6NCW0 530 aa23.46■■□□□ 1.35
COLCA2-201ENST00000398035 USP17L4A6NCW7 530 aa23.46■■□□□ 1.35
COLCA2-201ENST00000398035 HSPA6P17066 643 aa23.46■■□□□ 1.35
COLCA2-201ENST00000398035 EPS15P42566 896 aa23.46■■□□□ 1.35
COLCA2-201ENST00000398035 USP17L1Q7RTZ2 530 aa23.46■■□□□ 1.35
COLCA2-201ENST00000398035 AGBL3Q8NEM8 1001 aa23.46■■□□□ 1.35
COLCA2-201ENST00000398035 KCNQ5Q9NR82 932 aa23.46■■□□□ 1.35
COLCA2-201ENST00000398035 CNOT7Q9UIV1 285 aaKnown RBP23.46■■□□□ 1.35
COLCA2-201ENST00000398035 TNNQ9UQP3 1299 aa23.46■■□□□ 1.35
COLCA2-201ENST00000398035 CLEC11AQ9Y240 323 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms