RNA–Protein interactions for RNA: ENST00000397958.5

HGNC:18790-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HGNC:18790, Length 2,650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HGNC:18790-201ENST00000397958 SMC3Q9UQE7 1217 aa16.74■□□□□ 0.27
HGNC:18790-201ENST00000397958 SNX14Q9Y5W7 946 aa16.74■□□□□ 0.27
HGNC:18790-201ENST00000397958 CRKLP46109 303 aaKnown RBP16.73■□□□□ 0.27
HGNC:18790-201ENST00000397958 AK2P54819 239 aa16.73■□□□□ 0.27
HGNC:18790-201ENST00000397958 SEPT12Q8IYM1 358 aa16.73■□□□□ 0.27
HGNC:18790-201ENST00000397958 ITGB4P16144 1822 aa16.73■□□□□ 0.27
HGNC:18790-201ENST00000397958 COL22A1Q8NFW1 1626 aaPredicted RBP16.73■□□□□ 0.27
HGNC:18790-201ENST00000397958 MRC1P22897 1456 aa16.73■□□□□ 0.27
HGNC:18790-201ENST00000397958 TPRNQ4KMQ1 711 aa16.73■□□□□ 0.27
HGNC:18790-201ENST00000397958 ABCC6O95255 1503 aa16.73■□□□□ 0.27
HGNC:18790-201ENST00000397958 CCDC192P0DO97 292 aa16.73■□□□□ 0.27
HGNC:18790-201ENST00000397958 RUFY3Q7L099 469 aa16.73■□□□□ 0.27
HGNC:18790-201ENST00000397958 RHPN1Q8TCX5 695 aa16.73■□□□□ 0.27
HGNC:18790-201ENST00000397958 FEZ1Q99689 392 aa16.73■□□□□ 0.27
HGNC:18790-201ENST00000397958 SGSM2O43147 1006 aa16.72■□□□□ 0.27
HGNC:18790-201ENST00000397958 INTS5Q6P9B9 1019 aaKnown RBP16.72■□□□□ 0.27
HGNC:18790-201ENST00000397958 TNS2Q63HR2 1409 aa16.71■□□□□ 0.27
HGNC:18790-201ENST00000397958 GLI3P10071 1580 aa16.71■□□□□ 0.27
HGNC:18790-201ENST00000397958 ALDH1L1O75891 902 aa16.71■□□□□ 0.27
HGNC:18790-201ENST00000397958 CHGBP05060 677 aa16.71■□□□□ 0.27
HGNC:18790-201ENST00000397958 BARGINQ6ZT62 677 aa16.71■□□□□ 0.27
HGNC:18790-201ENST00000397958 SPC24Q8NBT2 197 aa16.71■□□□□ 0.27
HGNC:18790-201ENST00000397958 THRAP3Q9Y2W1 955 aaKnown RBP16.71■□□□□ 0.27
HGNC:18790-201ENST00000397958 CACNA1FO60840 1977 aa16.71■□□□□ 0.27
HGNC:18790-201ENST00000397958 IGSF3O75054 1194 aa16.71■□□□□ 0.26
HGNC:18790-201ENST00000397958 SASH1O94885 1247 aa16.71■□□□□ 0.26
HGNC:18790-201ENST00000397958 U2AF2P26368 475 aaKnown RBP eCLIP16.71■□□□□ 0.26
HGNC:18790-201ENST00000397958 DZIP3Q86Y13 1208 aaKnown RBP16.71■□□□□ 0.26
HGNC:18790-201ENST00000397958 EDC3Q96F86 508 aaKnown RBP16.71■□□□□ 0.26
HGNC:18790-201ENST00000397958 PUS3Q9BZE2 481 aaKnown RBP16.71■□□□□ 0.26
HGNC:18790-201ENST00000397958 DNM1Q05193 864 aaKnown RBP16.7■□□□□ 0.26
HGNC:18790-201ENST00000397958 POLA2Q14181 598 aa16.7■□□□□ 0.26
HGNC:18790-201ENST00000397958 LSG1Q9H089 658 aaKnown RBP16.7■□□□□ 0.26
HGNC:18790-201ENST00000397958 PALLDQ8WX93 1383 aa16.7■□□□□ 0.26
HGNC:18790-201ENST00000397958 SYCP1Q15431 976 aa16.7■□□□□ 0.26
HGNC:18790-201ENST00000397958 LINC00116Q8NCU8 138 aa16.7■□□□□ 0.26
HGNC:18790-201ENST00000397958 RASEFQ8IZ41 740 aa16.69■□□□□ 0.26
HGNC:18790-201ENST00000397958 FAM200AQ8TCP9 573 aa16.69■□□□□ 0.26
HGNC:18790-201ENST00000397958 MTMR6Q9Y217 621 aa16.69■□□□□ 0.26
HGNC:18790-201ENST00000397958 SNAP23O00161 211 aa16.69■□□□□ 0.26
HGNC:18790-201ENST00000397958 CWC25Q9NXE8 425 aaPredicted RBP16.69■□□□□ 0.26
HGNC:18790-201ENST00000397958 TRIM37O94972 964 aa16.68■□□□□ 0.26
HGNC:18790-201ENST00000397958 FGD1P98174 961 aa16.68■□□□□ 0.26
HGNC:18790-201ENST00000397958 LRRC24Q50LG9 513 aa16.68■□□□□ 0.26
HGNC:18790-201ENST00000397958 RAB11FIP3O75154 756 aa16.68■□□□□ 0.26
HGNC:18790-201ENST00000397958 GJB2P29033 226 aa16.68■□□□□ 0.26
HGNC:18790-201ENST00000397958 PI4K2BQ8TCG2 481 aa16.68■□□□□ 0.26
HGNC:18790-201ENST00000397958 LARP6Q9BRS8 491 aaKnown RBP16.68■□□□□ 0.26
HGNC:18790-201ENST00000397958 SRP68Q9UHB9 627 aaKnown RBP16.68■□□□□ 0.26
HGNC:18790-201ENST00000397958 KIF6Q6ZMV9 814 aa16.67■□□□□ 0.26
HGNC:18790-201ENST00000397958 AACSQ86V21 672 aa16.67■□□□□ 0.26
HGNC:18790-201ENST00000397958 EAF2Q96CJ1 260 aaPredicted RBP16.67■□□□□ 0.26
HGNC:18790-201ENST00000397958 OGFRQ9NZT2 677 aa16.67■□□□□ 0.26
HGNC:18790-201ENST00000397958 NRAPQ86VF7 1730 aa16.67■□□□□ 0.26
HGNC:18790-201ENST00000397958 DOT1LQ8TEK3 1739 aa16.67■□□□□ 0.26
HGNC:18790-201ENST00000397958 CASP7P55210 303 aa16.67■□□□□ 0.26
HGNC:18790-201ENST00000397958 FOXO4P98177 505 aa16.67■□□□□ 0.26
HGNC:18790-201ENST00000397958 TCIRG1Q13488 830 aa16.67■□□□□ 0.26
HGNC:18790-201ENST00000397958 PTGS1P23219 599 aa16.66■□□□□ 0.26
HGNC:18790-201ENST00000397958 TIMM10P62072 90 aa16.66■□□□□ 0.26
HGNC:18790-201ENST00000397958 NCBP1Q09161 790 aaKnown RBP16.66■□□□□ 0.26
HGNC:18790-201ENST00000397958 SLFNL1Q499Z3 407 aa16.66■□□□□ 0.26
HGNC:18790-201ENST00000397958 SLC51AQ86UW1 340 aa16.66■□□□□ 0.26
HGNC:18790-201ENST00000397958 CNTROBQ8N137 903 aa16.66■□□□□ 0.26
HGNC:18790-201ENST00000397958 ZSCAN31Q96LW9 406 aaPredicted RBP16.66■□□□□ 0.26
HGNC:18790-201ENST00000397958 CHMP4AQ9BY43 222 aa16.66■□□□□ 0.26
HGNC:18790-201ENST00000397958 SPATA31A6Q5VVP1 1343 aa16.66■□□□□ 0.26
HGNC:18790-201ENST00000397958 LARGE1O95461 756 aa16.66■□□□□ 0.26
HGNC:18790-201ENST00000397958 CASTP20810 708 aaKnown RBP16.66■□□□□ 0.26
HGNC:18790-201ENST00000397958 TFCP2Q12800 502 aa16.66■□□□□ 0.26
HGNC:18790-201ENST00000397958 SH2B1Q9NRF2 756 aaPredicted RBP16.66■□□□□ 0.26
HGNC:18790-201ENST00000397958 PTPN12Q05209 780 aaKnown RBP16.65■□□□□ 0.26
HGNC:18790-201ENST00000397958 MAP3K11Q16584 847 aa16.65■□□□□ 0.26
HGNC:18790-201ENST00000397958 VPS53Q5VIR6 699 aa16.65■□□□□ 0.26
HGNC:18790-201ENST00000397958 CCDC83Q8IWF9 413 aa16.65■□□□□ 0.26
HGNC:18790-201ENST00000397958 CDCA7Q9BWT1 371 aaPredicted RBP16.65■□□□□ 0.26
HGNC:18790-201ENST00000397958 TRMT112Q9UI30 125 aaKnown RBP16.65■□□□□ 0.26
HGNC:18790-201ENST00000397958 UBN2Q6ZU65 1347 aa16.65■□□□□ 0.26
HGNC:18790-201ENST00000397958 SMTNL1A8MU46 457 aa16.65■□□□□ 0.26
HGNC:18790-201ENST00000397958 PDIA4P13667 645 aaKnown RBP16.65■□□□□ 0.26
HGNC:18790-201ENST00000397958 G3BP1Q13283 466 aaKnown RBP eCLIP16.65■□□□□ 0.26
HGNC:18790-201ENST00000397958 CCDC87Q9NVE4 849 aa16.64■□□□□ 0.26
HGNC:18790-201ENST00000397958 MRVI1Q9Y6F6 885 aa16.64■□□□□ 0.26
HGNC:18790-201ENST00000397958 WTIPA6NIX2 430 aaPredicted RBP16.64■□□□□ 0.25
HGNC:18790-201ENST00000397958 H7C1W4 665 aa16.64■□□□□ 0.25
HGNC:18790-201ENST00000397958 TYRO3Q06418 890 aa16.64■□□□□ 0.25
HGNC:18790-201ENST00000397958 HELBQ8NG08 1087 aaPredicted RBP16.64■□□□□ 0.25
HGNC:18790-201ENST00000397958 NUP62CLQ9H1M0 184 aa16.64■□□□□ 0.25
HGNC:18790-201ENST00000397958 BOLA2Q9H3K6 86 aa16.64■□□□□ 0.25
HGNC:18790-201ENST00000397958 MYH14Q7Z406 1995 aaKnown RBP16.64■□□□□ 0.25
HGNC:18790-201ENST00000397958 PXDNLA1KZ92 1463 aa16.64■□□□□ 0.25
HGNC:18790-201ENST00000397958 ELP1O95163 1332 aa16.64■□□□□ 0.25
HGNC:18790-201ENST00000397958 MAP3K15Q6ZN16 1313 aa16.64■□□□□ 0.25
HGNC:18790-201ENST00000397958 DTNBO60941 627 aa16.63■□□□□ 0.25
HGNC:18790-201ENST00000397958 CCDC186Q7Z3E2 898 aa16.63■□□□□ 0.25
HGNC:18790-201ENST00000397958 LRRC4BQ9NT99 713 aa16.63■□□□□ 0.25
HGNC:18790-201ENST00000397958 SUSD4Q5VX71 490 aa16.63■□□□□ 0.25
HGNC:18790-201ENST00000397958 CWC27Q6UX04 472 aaKnown RBP16.63■□□□□ 0.25
HGNC:18790-201ENST00000397958 NLRP10Q86W26 655 aa16.63■□□□□ 0.25
HGNC:18790-201ENST00000397958 NEUROD6Q96NK8 337 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms