RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 CCDC8Q9H0W5 538 aaPredicted RBP23.87■■□□□ 1.41
PDLIM2-205ENST00000397761 CNNM1Q9NRU3 951 aa23.87■■□□□ 1.41
PDLIM2-205ENST00000397761 TLR7Q9NYK1 1049 aaKnown RBP23.87■■□□□ 1.41
PDLIM2-205ENST00000397761 AKAP2Q9Y2D5 859 aa23.87■■□□□ 1.41
PDLIM2-205ENST00000397761 KLRG2A4D1S0 409 aaPredicted RBP23.86■■□□□ 1.41
PDLIM2-205ENST00000397761 GLRX3O76003 335 aaKnown RBP23.86■■□□□ 1.41
PDLIM2-205ENST00000397761 SDSP20132 328 aa23.86■■□□□ 1.41
PDLIM2-205ENST00000397761 IGHMBP2P38935 993 aaKnown RBP23.86■■□□□ 1.41
PDLIM2-205ENST00000397761 CCDC24Q8N4L8 307 aa23.86■■□□□ 1.41
PDLIM2-205ENST00000397761 ERC2O15083 957 aa23.85■■□□□ 1.41
PDLIM2-205ENST00000397761 NPHP1O15259 732 aa23.85■■□□□ 1.41
PDLIM2-205ENST00000397761 MPHOSPH8Q99549 860 aa23.85■■□□□ 1.41
PDLIM2-205ENST00000397761 AKAP11Q9UKA4 1901 aa23.85■■□□□ 1.41
PDLIM2-205ENST00000397761 COL11A2P13942 1736 aaPredicted RBP23.84■■□□□ 1.41
PDLIM2-205ENST00000397761 PDE8BO95263 885 aa23.84■■□□□ 1.41
PDLIM2-205ENST00000397761 R3HDM1Q15032 1099 aaKnown RBP23.84■■□□□ 1.41
PDLIM2-205ENST00000397761 METTL24Q5JXM2 366 aa23.84■■□□□ 1.41
PDLIM2-205ENST00000397761 A0A1B0GUL7 405 aa23.83■■□□□ 1.41
PDLIM2-205ENST00000397761 MMP10P09238 476 aa23.83■■□□□ 1.41
PDLIM2-205ENST00000397761 ANKRD18AQ8IVF6 992 aa23.83■■□□□ 1.41
PDLIM2-205ENST00000397761 DBNDD2Q9BQY9 259 aa23.83■■□□□ 1.41
PDLIM2-205ENST00000397761 BSDC1Q9NW68 430 aaPredicted RBP23.83■■□□□ 1.41
PDLIM2-205ENST00000397761 CDC45O75419 566 aa23.81■■□□□ 1.4
PDLIM2-205ENST00000397761 ATP5JP18859 108 aa23.81■■□□□ 1.4
PDLIM2-205ENST00000397761 TIMM10P62072 90 aa23.81■■□□□ 1.4
PDLIM2-205ENST00000397761 RPS8P62241 208 aaKnown RBP23.81■■□□□ 1.4
PDLIM2-205ENST00000397761 CELF1Q92879 486 aaKnown RBP23.81■■□□□ 1.4
PDLIM2-205ENST00000397761 LRRC37AA6NMS7 1700 aa23.81■■□□□ 1.4
PDLIM2-205ENST00000397761 FGFR2P21802 821 aa23.81■■□□□ 1.4
PDLIM2-205ENST00000397761 HOXA10P31260 410 aaPredicted RBP23.81■■□□□ 1.4
PDLIM2-205ENST00000397761 DDX46Q7L014 1031 aaKnown RBP23.81■■□□□ 1.4
PDLIM2-205ENST00000397761 BRIP1Q9BX63 1249 aa23.81■■□□□ 1.4
PDLIM2-205ENST00000397761 PARP3Q9Y6F1 533 aa23.81■■□□□ 1.4
PDLIM2-205ENST00000397761 ATP2B3Q16720 1220 aa23.8■■□□□ 1.4
PDLIM2-205ENST00000397761 SLC16A10Q8TF71 515 aa23.8■■□□□ 1.4
PDLIM2-205ENST00000397761 PUM3Q15397 648 aaKnown RBP23.79■■□□□ 1.4
PDLIM2-205ENST00000397761 MSL1Q68DK7 614 aa23.79■■□□□ 1.4
PDLIM2-205ENST00000397761 TBC1D9Q6ZT07 1266 aa23.79■■□□□ 1.4
PDLIM2-205ENST00000397761 KIF13BQ9NQT8 1826 aa23.79■■□□□ 1.4
PDLIM2-205ENST00000397761 CHRNDQ07001 517 aa23.78■■□□□ 1.4
PDLIM2-205ENST00000397761 NEUROD6Q96NK8 337 aa23.78■■□□□ 1.4
PDLIM2-205ENST00000397761 MYH7P12883 1935 aa23.77■■□□□ 1.4
PDLIM2-205ENST00000397761 GRAPQ13588 217 aa23.77■■□□□ 1.4
PDLIM2-205ENST00000397761 GRAPLQ8TC17 118 aaPredicted RBP23.77■■□□□ 1.4
PDLIM2-205ENST00000397761 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.77■■□□□ 1.4
PDLIM2-205ENST00000397761 XAGE2Q96GT9 111 aa23.77■■□□□ 1.4
PDLIM2-205ENST00000397761 DLEC1Q9Y238 1755 aa23.77■■□□□ 1.4
PDLIM2-205ENST00000397761 SEC24BO95487 1268 aa23.76■■□□□ 1.39
PDLIM2-205ENST00000397761 LPIN2Q92539 896 aa23.76■■□□□ 1.39
PDLIM2-205ENST00000397761 PDGFDQ9GZP0 370 aaPredicted RBP23.76■■□□□ 1.39
PDLIM2-205ENST00000397761 MINPP1Q9UNW1 487 aa23.76■■□□□ 1.39
PDLIM2-205ENST00000397761 CACNA1SQ13698 1873 aa23.76■■□□□ 1.39
PDLIM2-205ENST00000397761 LTBP1Q14766 1721 aa23.75■■□□□ 1.39
PDLIM2-205ENST00000397761 ADORA1P30542 326 aa23.75■■□□□ 1.39
PDLIM2-205ENST00000397761 RPGRQ92834 1020 aaKnown RBP23.75■■□□□ 1.39
PDLIM2-205ENST00000397761 CRAMP1Q96RY5 1269 aa23.75■■□□□ 1.39
PDLIM2-205ENST00000397761 RBM19Q9Y4C8 960 aaKnown RBP23.75■■□□□ 1.39
PDLIM2-205ENST00000397761 TRIM6-TRIM34B2RNG4 842 aa23.75■■□□□ 1.39
PDLIM2-205ENST00000397761 CNTROBQ8N137 903 aa23.75■■□□□ 1.39
PDLIM2-205ENST00000397761 HELBQ8NG08 1087 aaPredicted RBP23.75■■□□□ 1.39
PDLIM2-205ENST00000397761 ZNF512BQ96KM6 892 aaPredicted RBP23.75■■□□□ 1.39
PDLIM2-205ENST00000397761 HAUS7Q99871 368 aa23.75■■□□□ 1.39
PDLIM2-205ENST00000397761 MYH13Q9UKX3 1938 aa23.74■■□□□ 1.39
PDLIM2-205ENST00000397761 EVI5LQ96CN4 794 aa23.74■■□□□ 1.39
PDLIM2-205ENST00000397761 RBM17Q96I25 401 aaKnown RBP23.74■■□□□ 1.39
PDLIM2-205ENST00000397761 MYO5AQ9Y4I1 1855 aaKnown RBP23.73■■□□□ 1.39
PDLIM2-205ENST00000397761 TAF5LO75529 589 aa23.73■■□□□ 1.39
PDLIM2-205ENST00000397761 PDE6BP35913 854 aa23.73■■□□□ 1.39
PDLIM2-205ENST00000397761 BOLA2Q9H3K6 86 aa23.73■■□□□ 1.39
PDLIM2-205ENST00000397761 SRGNP10124 158 aa23.72■■□□□ 1.39
PDLIM2-205ENST00000397761 SLC5A1P13866 664 aa23.72■■□□□ 1.39
PDLIM2-205ENST00000397761 UBE4AQ14139 1066 aa23.72■■□□□ 1.39
PDLIM2-205ENST00000397761 CCDC158Q5M9N0 1113 aa23.72■■□□□ 1.39
PDLIM2-205ENST00000397761 RILPL2Q969X0 211 aa23.72■■□□□ 1.39
PDLIM2-205ENST00000397761 ANKRD2Q9GZV1 360 aa23.72■■□□□ 1.39
PDLIM2-205ENST00000397761 DOCK2Q92608 1830 aa23.72■■□□□ 1.39
PDLIM2-205ENST00000397761 EIF5BO60841 1220 aaKnown RBP23.71■■□□□ 1.39
PDLIM2-205ENST00000397761 CHMLP26374 656 aa23.71■■□□□ 1.39
PDLIM2-205ENST00000397761 BBOX1O75936 387 aa23.7■■□□□ 1.38
PDLIM2-205ENST00000397761 MAP4K4O95819 1239 aaPredicted RBP23.7■■□□□ 1.38
PDLIM2-205ENST00000397761 CASC1Q6TDU7 716 aa23.7■■□□□ 1.38
PDLIM2-205ENST00000397761 TICAM2Q86XR7 235 aa23.7■■□□□ 1.38
PDLIM2-205ENST00000397761 RFX7Q2KHR2 1363 aa23.7■■□□□ 1.38
PDLIM2-205ENST00000397761 C10orf71Q711Q0 1435 aa23.7■■□□□ 1.38
PDLIM2-205ENST00000397761 IFIT1P09914 478 aaKnown RBP23.69■■□□□ 1.38
PDLIM2-205ENST00000397761 NPR1P16066 1061 aa23.69■■□□□ 1.38
PDLIM2-205ENST00000397761 GORABQ5T7V8 394 aa23.69■■□□□ 1.38
PDLIM2-205ENST00000397761 TMC4Q7Z404 712 aa23.69■■□□□ 1.38
PDLIM2-205ENST00000397761 ARID4AP29374 1257 aaPredicted RBP23.68■■□□□ 1.38
PDLIM2-205ENST00000397761 SNAP23O00161 211 aa23.68■■□□□ 1.38
PDLIM2-205ENST00000397761 TTC39AQ5SRH9 613 aa23.68■■□□□ 1.38
PDLIM2-205ENST00000397761 CCDC102BQ68D86 513 aa23.68■■□□□ 1.38
PDLIM2-205ENST00000397761 SLX4Q8IY92 1834 aa23.67■■□□□ 1.38
PDLIM2-205ENST00000397761 KIAA1551Q9HCM1 1747 aa23.67■■□□□ 1.38
PDLIM2-205ENST00000397761 ZNF804BA4D1E1 1349 aa23.66■■□□□ 1.38
PDLIM2-205ENST00000397761 UQCRFS1P1P0C7P4 283 aa23.66■■□□□ 1.38
PDLIM2-205ENST00000397761 MASTLQ96GX5 879 aa23.66■■□□□ 1.38
PDLIM2-205ENST00000397761 IRS2Q9Y4H2 1338 aa23.66■■□□□ 1.38
PDLIM2-205ENST00000397761 ZBTB22O15209 634 aa23.65■■□□□ 1.38
PDLIM2-205ENST00000397761 PHKA1P46020 1223 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms