RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 ZNF215Q9UL58 517 aaPredicted RBP17.22■□□□□ 0.35
CCNF-202ENST00000397066 PTPRUQ92729 1446 aa17.22■□□□□ 0.35
CCNF-202ENST00000397066 AGLP35573 1532 aa17.22■□□□□ 0.35
CCNF-202ENST00000397066 SCRN1Q12765 414 aa17.21■□□□□ 0.35
CCNF-202ENST00000397066 CHST3Q7LGC8 479 aa17.21■□□□□ 0.35
CCNF-202ENST00000397066 DDX21Q9NR30 783 aaKnown RBP eCLIP17.21■□□□□ 0.35
CCNF-202ENST00000397066 SETD1AO15047 1707 aaKnown RBP17.21■□□□□ 0.35
CCNF-202ENST00000397066 BIN1O00499 593 aa17.21■□□□□ 0.35
CCNF-202ENST00000397066 COPS6Q7L5N1 327 aa17.21■□□□□ 0.35
CCNF-202ENST00000397066 UBE3BQ7Z3V4 1068 aa17.21■□□□□ 0.35
CCNF-202ENST00000397066 USP27XA6NNY8 438 aa17.21■□□□□ 0.35
CCNF-202ENST00000397066 THEMISQ8N1K5 641 aaPredicted RBP17.21■□□□□ 0.35
CCNF-202ENST00000397066 KCNH5Q8NCM2 988 aa17.21■□□□□ 0.35
CCNF-202ENST00000397066 USP28Q96RU2 1077 aa17.21■□□□□ 0.34
CCNF-202ENST00000397066 XRN1Q8IZH2 1706 aaKnown RBP17.21■□□□□ 0.34
CCNF-202ENST00000397066 GOLIM4O00461 696 aa17.2■□□□□ 0.34
CCNF-202ENST00000397066 CYP21A2P08686 494 aa17.2■□□□□ 0.34
CCNF-202ENST00000397066 HMGB1P09429 215 aaKnown RBP17.2■□□□□ 0.34
CCNF-202ENST00000397066 MRFAP1L1Q96HT8 127 aa17.2■□□□□ 0.34
CCNF-202ENST00000397066 ZNF397Q8NF99 534 aaPredicted RBP17.2■□□□□ 0.34
CCNF-202ENST00000397066 DBNDD2Q9BQY9 259 aa17.2■□□□□ 0.34
CCNF-202ENST00000397066 CHGBP05060 677 aa17.2■□□□□ 0.34
CCNF-202ENST00000397066 FAM160A1Q05DH4 1040 aa17.2■□□□□ 0.34
CCNF-202ENST00000397066 TNNI3KQ59H18 835 aa17.2■□□□□ 0.34
CCNF-202ENST00000397066 TMC6Q7Z403 805 aa17.2■□□□□ 0.34
CCNF-202ENST00000397066 TTC5Q8N0Z6 440 aa17.2■□□□□ 0.34
CCNF-202ENST00000397066 FPGT-TNNI3KV9GXZ4 949 aa17.2■□□□□ 0.34
CCNF-202ENST00000397066 CEMIPQ8WUJ3 1361 aa17.2■□□□□ 0.34
CCNF-202ENST00000397066 ATP5J2-PTCD1G3V325 749 aa17.19■□□□□ 0.34
CCNF-202ENST00000397066 PTCD1O75127 700 aaKnown RBP17.19■□□□□ 0.34
CCNF-202ENST00000397066 SNW1Q13573 536 aaKnown RBP17.19■□□□□ 0.34
CCNF-202ENST00000397066 GNL2Q13823 731 aaKnown RBP17.19■□□□□ 0.34
CCNF-202ENST00000397066 SYNE3Q6ZMZ3 975 aa17.19■□□□□ 0.34
CCNF-202ENST00000397066 DHX32Q7L7V1 743 aaKnown RBP17.19■□□□□ 0.34
CCNF-202ENST00000397066 KRT222Q8N1A0 295 aa17.19■□□□□ 0.34
CCNF-202ENST00000397066 CTNNA3Q9UI47 895 aa17.19■□□□□ 0.34
CCNF-202ENST00000397066 CPLX1O14810 134 aa17.19■□□□□ 0.34
CCNF-202ENST00000397066 POLR3DP05423 398 aaPredicted RBP17.19■□□□□ 0.34
CCNF-202ENST00000397066 CDC25BP30305 580 aa17.19■□□□□ 0.34
CCNF-202ENST00000397066 ELF2Q15723 593 aa17.19■□□□□ 0.34
CCNF-202ENST00000397066 SYTL4Q96C24 671 aaPredicted RBP17.19■□□□□ 0.34
CCNF-202ENST00000397066 DBNLQ9UJU6 430 aaKnown RBP17.19■□□□□ 0.34
CCNF-202ENST00000397066 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.19■□□□□ 0.34
CCNF-202ENST00000397066 A0A1B0GVL5 298 aa17.19■□□□□ 0.34
CCNF-202ENST00000397066 RGPD1P0DJD0 1748 aa17.19■□□□□ 0.34
CCNF-202ENST00000397066 GSDMDP57764 484 aa17.19■□□□□ 0.34
CCNF-202ENST00000397066 FAM208AQ9UK61 1670 aaKnown RBP17.19■□□□□ 0.34
CCNF-202ENST00000397066 SFPQP23246 707 aaKnown RBP eCLIP17.18■□□□□ 0.34
CCNF-202ENST00000397066 SYCP1Q15431 976 aa17.18■□□□□ 0.34
CCNF-202ENST00000397066 ATP5JP18859 108 aa17.18■□□□□ 0.34
CCNF-202ENST00000397066 RBM43Q6ZSC3 357 aaKnown RBP17.18■□□□□ 0.34
CCNF-202ENST00000397066 MRPS27Q92552 414 aaKnown RBP17.18■□□□□ 0.34
CCNF-202ENST00000397066 SETD1BQ9UPS6 1966 aaKnown RBP17.18■□□□□ 0.34
CCNF-202ENST00000397066 SLU7O95391 586 aaKnown RBP17.18■□□□□ 0.34
CCNF-202ENST00000397066 GCKRQ14397 625 aa17.18■□□□□ 0.34
CCNF-202ENST00000397066 RAPGEF4Q8WZA2 1011 aa17.18■□□□□ 0.34
CCNF-202ENST00000397066 ALDH8A1Q9H2A2 487 aaPredicted RBP17.18■□□□□ 0.34
CCNF-202ENST00000397066 ERICH4A6NGS2 130 aa17.17■□□□□ 0.34
CCNF-202ENST00000397066 IQCB1Q15051 598 aa17.17■□□□□ 0.34
CCNF-202ENST00000397066 ISM2Q6H9L7 571 aa17.17■□□□□ 0.34
CCNF-202ENST00000397066 ANKRD24Q8TF21 1146 aa17.17■□□□□ 0.34
CCNF-202ENST00000397066 CHMP4CQ96CF2 233 aa17.17■□□□□ 0.34
CCNF-202ENST00000397066 KAZALD1Q96I82 304 aa17.17■□□□□ 0.34
CCNF-202ENST00000397066 GOLPH3LQ9H4A5 285 aa17.17■□□□□ 0.34
CCNF-202ENST00000397066 A0A087WZG4 1122 aa17.17■□□□□ 0.34
CCNF-202ENST00000397066 NEURL1BA8MQ27 555 aa17.17■□□□□ 0.34
CCNF-202ENST00000397066 ANKRD13DQ6ZTN6 518 aa17.17■□□□□ 0.34
CCNF-202ENST00000397066 KIF2AO00139 706 aaPredicted RBP17.17■□□□□ 0.34
CCNF-202ENST00000397066 EPHA10Q5JZY3 1008 aa17.17■□□□□ 0.34
CCNF-202ENST00000397066 NAA16Q6N069 864 aaPredicted RBP17.17■□□□□ 0.34
CCNF-202ENST00000397066 LLPHQ9BRT6 129 aaKnown RBP17.17■□□□□ 0.34
CCNF-202ENST00000397066 WASHC4Q2M389 1173 aa17.16■□□□□ 0.34
CCNF-202ENST00000397066 NLRP2Q9NX02 1062 aa17.16■□□□□ 0.34
CCNF-202ENST00000397066 MED23Q9ULK4 1368 aa17.16■□□□□ 0.34
CCNF-202ENST00000397066 IGKV5-2P06315 115 aa17.16■□□□□ 0.34
CCNF-202ENST00000397066 RAB11FIP4Q86YS3 637 aa17.16■□□□□ 0.34
CCNF-202ENST00000397066 NSUN7Q8NE18 718 aaKnown RBP17.16■□□□□ 0.34
CCNF-202ENST00000397066 IFNKQ9P0W0 207 aa17.16■□□□□ 0.34
CCNF-202ENST00000397066 RCOR1Q9UKL0 485 aa17.16■□□□□ 0.34
CCNF-202ENST00000397066 PFKFB2O60825 505 aa17.16■□□□□ 0.34
CCNF-202ENST00000397066 CSB-PGBD3P0DP91 1061 aa17.16■□□□□ 0.34
CCNF-202ENST00000397066 OTUD7BQ6GQQ9 843 aa17.16■□□□□ 0.34
CCNF-202ENST00000397066 ERO1AQ96HE7 468 aa17.16■□□□□ 0.34
CCNF-202ENST00000397066 SARM1Q6SZW1 724 aa17.16■□□□□ 0.34
CCNF-202ENST00000397066 PODXL2Q9NZ53 605 aa17.16■□□□□ 0.34
CCNF-202ENST00000397066 TSGA10IPQ3SY00 556 aa17.15■□□□□ 0.34
CCNF-202ENST00000397066 CCAR2Q8N163 923 aaKnown RBP17.15■□□□□ 0.34
CCNF-202ENST00000397066 DDX41Q9UJV9 622 aaKnown RBP17.15■□□□□ 0.34
CCNF-202ENST00000397066 GABPB1Q06547 395 aaPredicted RBP17.15■□□□□ 0.34
CCNF-202ENST00000397066 SYT10Q6XYQ8 523 aa17.15■□□□□ 0.34
CCNF-202ENST00000397066 MNS1Q8NEH6 495 aa17.15■□□□□ 0.34
CCNF-202ENST00000397066 C8orf76Q96K31 380 aa17.15■□□□□ 0.34
CCNF-202ENST00000397066 SLC3A2P08195 630 aaKnown RBP17.14■□□□□ 0.33
CCNF-202ENST00000397066 NPHP4O75161 1426 aaPredicted RBP17.14■□□□□ 0.33
CCNF-202ENST00000397066 SLFNL1Q499Z3 407 aa17.14■□□□□ 0.33
CCNF-202ENST00000397066 DIP2BQ9P265 1576 aa17.14■□□□□ 0.33
CCNF-202ENST00000397066 HAND2P61296 217 aa17.14■□□□□ 0.33
CCNF-202ENST00000397066 FKBP4Q02790 459 aaKnown RBP eCLIP17.14■□□□□ 0.33
CCNF-202ENST00000397066 METTL22Q9BUU2 404 aaPredicted RBP17.14■□□□□ 0.33
CCNF-202ENST00000397066 SERPINC1P01008 464 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms