RNA–Protein interactions for RNA: ENST00000396563.8

SP140L-202, Transcript of SP140 nuclear body protein like, humanhuman

TSL 1 (best) BASIC

Gene SP140L, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140L-202ENST00000396563 USP44Q9H0E7 712 aa12.47□□□□□ -0.41
SP140L-202ENST00000396563 GEMIN8Q9NWZ8 242 aaKnown RBP12.47□□□□□ -0.41
SP140L-202ENST00000396563 RCOR1Q9UKL0 485 aa12.47□□□□□ -0.41
SP140L-202ENST00000396563 ZSCAN12O43309 604 aa12.47□□□□□ -0.41
SP140L-202ENST00000396563 RPS6KB1P23443 525 aa12.47□□□□□ -0.41
SP140L-202ENST00000396563 CASQ1P31415 396 aa12.47□□□□□ -0.41
SP140L-202ENST00000396563 NUTM2DQ5VT03 806 aaPredicted RBP12.47□□□□□ -0.41
SP140L-202ENST00000396563 CLASRPQ8N2M8 674 aaKnown RBP12.47□□□□□ -0.41
SP140L-202ENST00000396563 GTF3C6Q969F1 213 aa12.47□□□□□ -0.41
SP140L-202ENST00000396563 MPHOSPH8Q99549 860 aa12.47□□□□□ -0.41
SP140L-202ENST00000396563 ECHDC1Q9NTX5 307 aa12.47□□□□□ -0.41
SP140L-202ENST00000396563 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.47□□□□□ -0.41
SP140L-202ENST00000396563 CEP170BQ9Y4F5 1589 aaPredicted RBP12.46□□□□□ -0.41
SP140L-202ENST00000396563 FAM160A1Q05DH4 1040 aa12.46□□□□□ -0.41
SP140L-202ENST00000396563 ZSCAN26Q16670 478 aa12.46□□□□□ -0.41
SP140L-202ENST00000396563 E4F1Q66K89 784 aaPredicted RBP12.46□□□□□ -0.41
SP140L-202ENST00000396563 PPP1R42Q7Z4L9 355 aa12.46□□□□□ -0.41
SP140L-202ENST00000396563 IL1RAPL2Q9NP60 686 aa12.46□□□□□ -0.41
SP140L-202ENST00000396563 TRMT1Q9NXH9 659 aaKnown RBP12.46□□□□□ -0.41
SP140L-202ENST00000396563 SPG7Q9UQ90 795 aa12.46□□□□□ -0.41
SP140L-202ENST00000396563 CHMP3Q9Y3E7 222 aa12.46□□□□□ -0.41
SP140L-202ENST00000396563 RBM8AQ9Y5S9 174 aaKnown RBP12.46□□□□□ -0.41
SP140L-202ENST00000396563 JCADQ9P266 1359 aa12.46□□□□□ -0.41
SP140L-202ENST00000396563 CPS1P31327 1500 aa12.46□□□□□ -0.42
SP140L-202ENST00000396563 TADA3O75528 432 aa12.45□□□□□ -0.42
SP140L-202ENST00000396563 MTX1Q13505 466 aa12.45□□□□□ -0.42
SP140L-202ENST00000396563 ZRSR1Q15695 479 aaKnown RBP12.45□□□□□ -0.42
SP140L-202ENST00000396563 ADCK5Q3MIX3 580 aa12.45□□□□□ -0.42
SP140L-202ENST00000396563 LARP1Q6PKG0 1096 aaKnown RBP12.45□□□□□ -0.42
SP140L-202ENST00000396563 SYT10Q6XYQ8 523 aa12.45□□□□□ -0.42
SP140L-202ENST00000396563 CCDC61Q9Y6R9 512 aa12.45□□□□□ -0.42
SP140L-202ENST00000396563 NEO1Q92859 1461 aa12.45□□□□□ -0.42
SP140L-202ENST00000396563 KDRP35968 1356 aa12.45□□□□□ -0.42
SP140L-202ENST00000396563 H3BQV1 296 aa12.45□□□□□ -0.42
SP140L-202ENST00000396563 POTEB2H3BUK9 544 aa12.45□□□□□ -0.42
SP140L-202ENST00000396563 CBFA2T2O43439 604 aa12.45□□□□□ -0.42
SP140L-202ENST00000396563 IFFO2Q5TF58 517 aa12.45□□□□□ -0.42
SP140L-202ENST00000396563 KRBA2Q6ZNG9 492 aa12.45□□□□□ -0.42
SP140L-202ENST00000396563 C11orf57Q6ZUT1 292 aaPredicted RBP12.45□□□□□ -0.42
SP140L-202ENST00000396563 FERMT3Q86UX7 667 aa12.45□□□□□ -0.42
SP140L-202ENST00000396563 USP16Q9Y5T5 823 aa12.45□□□□□ -0.42
SP140L-202ENST00000396563 MYH15Q9Y2K3 1946 aa12.45□□□□□ -0.42
SP140L-202ENST00000396563 RPS6KA5O75582 802 aa12.44□□□□□ -0.42
SP140L-202ENST00000396563 FBLN1P23142 703 aa12.44□□□□□ -0.42
SP140L-202ENST00000396563 BARGINQ6ZT62 677 aa12.44□□□□□ -0.42
SP140L-202ENST00000396563 ANKRD13AQ8IZ07 590 aa12.44□□□□□ -0.42
SP140L-202ENST00000396563 NECAB1Q8N987 351 aa12.44□□□□□ -0.42
SP140L-202ENST00000396563 ARFGAP3Q9NP61 516 aa12.44□□□□□ -0.42
SP140L-202ENST00000396563 DIP2CQ9Y2E4 1556 aa12.44□□□□□ -0.42
SP140L-202ENST00000396563 OVOS2A0A0J9YW53 1432 aa12.44□□□□□ -0.42
SP140L-202ENST00000396563 OVOS2Q6IE36 1432 aa12.44□□□□□ -0.42
SP140L-202ENST00000396563 ADCY9O60503 1353 aa12.44□□□□□ -0.42
SP140L-202ENST00000396563 USP31Q70CQ4 1352 aa12.44□□□□□ -0.42
SP140L-202ENST00000396563 SLC27A2O14975 620 aa12.44□□□□□ -0.42
SP140L-202ENST00000396563 PTH1RQ03431 593 aa12.44□□□□□ -0.42
SP140L-202ENST00000396563 RRS1Q15050 365 aaKnown RBP12.44□□□□□ -0.42
SP140L-202ENST00000396563 HOMER1Q86YM7 354 aa12.44□□□□□ -0.42
SP140L-202ENST00000396563 CCAR1Q8IX12 1150 aaKnown RBP12.44□□□□□ -0.42
SP140L-202ENST00000396563 PLCD3Q8N3E9 789 aa12.44□□□□□ -0.42
SP140L-202ENST00000396563 RFX7Q2KHR2 1363 aa12.44□□□□□ -0.42
SP140L-202ENST00000396563 MYO1CO00159 1063 aa12.43□□□□□ -0.42
SP140L-202ENST00000396563 MARCH6O60337 910 aa12.43□□□□□ -0.42
SP140L-202ENST00000396563 HOXB7P09629 217 aa12.43□□□□□ -0.42
SP140L-202ENST00000396563 SMC1AQ14683 1233 aaKnown RBP12.43□□□□□ -0.42
SP140L-202ENST00000396563 BRD3Q15059 726 aa12.43□□□□□ -0.42
SP140L-202ENST00000396563 ST7Q9NRC1 585 aa12.43□□□□□ -0.42
SP140L-202ENST00000396563 TFIP11Q9UBB9 837 aaKnown RBP12.43□□□□□ -0.42
SP140L-202ENST00000396563 STAG3Q9UJ98 1225 aa12.43□□□□□ -0.42
SP140L-202ENST00000396563 A0A1W2PQ27 194 aa12.43□□□□□ -0.42
SP140L-202ENST00000396563 A0A1W2PQ64 194 aa12.43□□□□□ -0.42
SP140L-202ENST00000396563 A0A1W2PQD8 194 aa12.43□□□□□ -0.42
SP140L-202ENST00000396563 UNCXA6NJT0 531 aa12.43□□□□□ -0.42
SP140L-202ENST00000396563 SRGAP3O43295 1099 aa12.43□□□□□ -0.42
SP140L-202ENST00000396563 TUBBP07437 444 aa12.43□□□□□ -0.42
SP140L-202ENST00000396563 OAS2P29728 719 aaKnown RBP12.43□□□□□ -0.42
SP140L-202ENST00000396563 TUBB2AQ13885 445 aa12.43□□□□□ -0.42
SP140L-202ENST00000396563 LEKR1Q6ZMV7 388 aa12.43□□□□□ -0.42
SP140L-202ENST00000396563 WAPLQ7Z5K2 1190 aa12.43□□□□□ -0.42
SP140L-202ENST00000396563 CCDC191Q8NCU4 936 aa12.43□□□□□ -0.42
SP140L-202ENST00000396563 RABGGTAQ92696 567 aa12.43□□□□□ -0.42
SP140L-202ENST00000396563 DDX11Q96FC9 970 aa12.43□□□□□ -0.42
SP140L-202ENST00000396563 TUBB2BQ9BVA1 445 aa12.43□□□□□ -0.42
SP140L-202ENST00000396563 SBNO1A3KN83 1393 aa12.43□□□□□ -0.42
SP140L-202ENST00000396563 A0A1B0GUL7 405 aa12.42□□□□□ -0.42
SP140L-202ENST00000396563 IKBKBO14920 756 aa12.42□□□□□ -0.42
SP140L-202ENST00000396563 CPA1P15085 419 aa12.42□□□□□ -0.42
SP140L-202ENST00000396563 ACTN2P35609 894 aa12.42□□□□□ -0.42
SP140L-202ENST00000396563 NOP2P46087 812 aaKnown RBP12.42□□□□□ -0.42
SP140L-202ENST00000396563 ARID5BQ14865 1188 aa12.42□□□□□ -0.42
SP140L-202ENST00000396563 CC2D1AQ6P1N0 951 aaPredicted RBP12.42□□□□□ -0.42
SP140L-202ENST00000396563 SRLQ86TD4 932 aa12.42□□□□□ -0.42
SP140L-202ENST00000396563 ENGASEQ8NFI3 743 aa12.42□□□□□ -0.42
SP140L-202ENST00000396563 LARP6Q9BRS8 491 aaKnown RBP12.42□□□□□ -0.42
SP140L-202ENST00000396563 MKRN1Q9UHC7 482 aaKnown RBP12.42□□□□□ -0.42
SP140L-202ENST00000396563 RSPH14Q9UHP6 348 aa12.42□□□□□ -0.42
SP140L-202ENST00000396563 SMC2O95347 1197 aa12.42□□□□□ -0.42
SP140L-202ENST00000396563 MAP4K4O95819 1239 aaPredicted RBP12.42□□□□□ -0.42
SP140L-202ENST00000396563 NBPF11Q86T75 865 aa12.42□□□□□ -0.42
SP140L-202ENST00000396563 AOPEPQ8N6M6 819 aa12.42□□□□□ -0.42
SP140L-202ENST00000396563 SMARCC2Q8TAQ2 1214 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms