RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 ZNF397Q8NF99 534 aaPredicted RBP11.57□□□□□ -0.56
TRIM39-203ENST00000396547 IL17REQ8NFR9 667 aa11.57□□□□□ -0.56
TRIM39-203ENST00000396547 BRF1Q92994 677 aa11.57□□□□□ -0.56
TRIM39-203ENST00000396547 CHPF2Q9P2E5 772 aa11.57□□□□□ -0.56
TRIM39-203ENST00000396547 CCDC171Q6TFL3 1326 aa11.56□□□□□ -0.56
TRIM39-203ENST00000396547 SLC27A2O14975 620 aa11.56□□□□□ -0.56
TRIM39-203ENST00000396547 ONECUT3O60422 494 aaPredicted RBP11.56□□□□□ -0.56
TRIM39-203ENST00000396547 GABPB1Q06547 395 aaPredicted RBP11.56□□□□□ -0.56
TRIM39-203ENST00000396547 ISM2Q6H9L7 571 aa11.56□□□□□ -0.56
TRIM39-203ENST00000396547 FAM177A1Q8N128 213 aaPredicted RBP11.56□□□□□ -0.56
TRIM39-203ENST00000396547 GPATCH3Q96I76 525 aa11.56□□□□□ -0.56
TRIM39-203ENST00000396547 MORC2Q9Y6X9 1032 aaPredicted RBP11.56□□□□□ -0.56
TRIM39-203ENST00000396547 PSMA5P28066 241 aa11.55□□□□□ -0.56
TRIM39-203ENST00000396547 AIMP1Q12904 312 aaKnown RBP11.55□□□□□ -0.56
TRIM39-203ENST00000396547 HOMER1Q86YM7 354 aa11.55□□□□□ -0.56
TRIM39-203ENST00000396547 CCAR1Q8IX12 1150 aaKnown RBP11.55□□□□□ -0.56
TRIM39-203ENST00000396547 NGDNQ8NEJ9 315 aaKnown RBP11.55□□□□□ -0.56
TRIM39-203ENST00000396547 TDRD7Q8NHU6 1098 aaKnown RBP11.55□□□□□ -0.56
TRIM39-203ENST00000396547 KLHDC4Q8TBB5 520 aa11.55□□□□□ -0.56
TRIM39-203ENST00000396547 RGPD3A6NKT7 1758 aaPredicted RBP11.55□□□□□ -0.56
TRIM39-203ENST00000396547 RGPD4Q7Z3J3 1758 aa11.55□□□□□ -0.56
TRIM39-203ENST00000396547 BIN1O00499 593 aa11.55□□□□□ -0.56
TRIM39-203ENST00000396547 KCNQ3O43525 872 aa11.55□□□□□ -0.56
TRIM39-203ENST00000396547 SMC2O95347 1197 aa11.55□□□□□ -0.56
TRIM39-203ENST00000396547 NECTIN1Q15223 517 aa11.55□□□□□ -0.56
TRIM39-203ENST00000396547 SYT10Q6XYQ8 523 aa11.55□□□□□ -0.56
TRIM39-203ENST00000396547 AOPEPQ8N6M6 819 aa11.55□□□□□ -0.56
TRIM39-203ENST00000396547 TMX1Q9H3N1 280 aa11.55□□□□□ -0.56
TRIM39-203ENST00000396547 AOX1Q06278 1338 aa11.55□□□□□ -0.56
TRIM39-203ENST00000396547 A0A0D9SFI3 127 aa11.55□□□□□ -0.56
TRIM39-203ENST00000396547 CHGBP05060 677 aa11.55□□□□□ -0.56
TRIM39-203ENST00000396547 CWF19L2Q2TBE0 894 aaKnown RBP11.55□□□□□ -0.56
TRIM39-203ENST00000396547 LRRN4CLQ8ND94 238 aa11.55□□□□□ -0.56
TRIM39-203ENST00000396547 ZRSR1Q15695 479 aaKnown RBP11.54□□□□□ -0.56
TRIM39-203ENST00000396547 DNAAF4Q8WXU2 420 aa11.54□□□□□ -0.56
TRIM39-203ENST00000396547 SDF4Q9BRK5 362 aa11.54□□□□□ -0.56
TRIM39-203ENST00000396547 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.54□□□□□ -0.56
TRIM39-203ENST00000396547 AFF2P51816 1311 aa11.54□□□□□ -0.56
TRIM39-203ENST00000396547 CCDC66A2RUB6 948 aa11.54□□□□□ -0.56
TRIM39-203ENST00000396547 ME1P48163 572 aa11.54□□□□□ -0.56
TRIM39-203ENST00000396547 CCT2P78371 535 aaKnown RBP11.54□□□□□ -0.56
TRIM39-203ENST00000396547 VPS72Q15906 364 aa11.54□□□□□ -0.56
TRIM39-203ENST00000396547 PTPN21Q16825 1174 aa11.54□□□□□ -0.56
TRIM39-203ENST00000396547 TLR7Q9NYK1 1049 aaKnown RBP11.54□□□□□ -0.56
TRIM39-203ENST00000396547 SLU7O95391 586 aaKnown RBP11.53□□□□□ -0.56
TRIM39-203ENST00000396547 RBM6P78332 1123 aaKnown RBP11.53□□□□□ -0.56
TRIM39-203ENST00000396547 POLA2Q14181 598 aa11.53□□□□□ -0.56
TRIM39-203ENST00000396547 CCDC73Q6ZRK6 1079 aa11.53□□□□□ -0.56
TRIM39-203ENST00000396547 PEAK1Q9H792 1746 aa11.53□□□□□ -0.56
TRIM39-203ENST00000396547 BRWD3Q6RI45 1802 aa11.53□□□□□ -0.56
TRIM39-203ENST00000396547 NLRP6P59044 892 aa11.53□□□□□ -0.56
TRIM39-203ENST00000396547 IRX5P78411 483 aaPredicted RBP11.53□□□□□ -0.56
TRIM39-203ENST00000396547 HSP90AB4PQ58FF6 505 aa11.53□□□□□ -0.56
TRIM39-203ENST00000396547 RNF20Q5VTR2 975 aa11.53□□□□□ -0.56
TRIM39-203ENST00000396547 CCDC129Q6ZRS4 1044 aa11.53□□□□□ -0.56
TRIM39-203ENST00000396547 TIGD1Q96MW7 591 aa11.53□□□□□ -0.56
TRIM39-203ENST00000396547 NOL10Q9BSC4 688 aaKnown RBP11.53□□□□□ -0.56
TRIM39-203ENST00000396547 KINO60870 393 aaKnown RBP11.53□□□□□ -0.56
TRIM39-203ENST00000396547 G3BP1Q13283 466 aaKnown RBP eCLIP11.53□□□□□ -0.56
TRIM39-203ENST00000396547 SNW1Q13573 536 aaKnown RBP11.53□□□□□ -0.56
TRIM39-203ENST00000396547 TAF3Q5VWG9 929 aa11.53□□□□□ -0.56
TRIM39-203ENST00000396547 ZNF589Q86UQ0 364 aaPredicted RBP11.53□□□□□ -0.56
TRIM39-203ENST00000396547 EVI5LQ96CN4 794 aa11.53□□□□□ -0.56
TRIM39-203ENST00000396547 ZFP91Q96JP5 570 aaPredicted RBP11.53□□□□□ -0.56
TRIM39-203ENST00000396547 RPS6KB1P23443 525 aa11.52□□□□□ -0.57
TRIM39-203ENST00000396547 TOB2Q14106 344 aaPredicted RBP11.52□□□□□ -0.57
TRIM39-203ENST00000396547 TMC6Q7Z403 805 aa11.52□□□□□ -0.57
TRIM39-203ENST00000396547 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.52□□□□□ -0.57
TRIM39-203ENST00000396547 IL17RAQ96F46 866 aa11.52□□□□□ -0.57
TRIM39-203ENST00000396547 TM6SF1Q9BZW5 370 aa11.52□□□□□ -0.57
TRIM39-203ENST00000396547 LGR6Q9HBX8 967 aa11.52□□□□□ -0.57
TRIM39-203ENST00000396547 RGPD5Q99666 1765 aa11.52□□□□□ -0.57
TRIM39-203ENST00000396547 BCL9O00512 1426 aa11.52□□□□□ -0.57
TRIM39-203ENST00000396547 POTEAQ6S8J7 498 aa11.52□□□□□ -0.57
TRIM39-203ENST00000396547 Q6ZUG5 572 aa11.52□□□□□ -0.57
TRIM39-203ENST00000396547 CCAR2Q8N163 923 aaKnown RBP11.52□□□□□ -0.57
TRIM39-203ENST00000396547 NCAPD2Q15021 1401 aa11.52□□□□□ -0.57
TRIM39-203ENST00000396547 IQCB1Q15051 598 aa11.51□□□□□ -0.57
TRIM39-203ENST00000396547 FSIP1Q8NA03 581 aa11.51□□□□□ -0.57
TRIM39-203ENST00000396547 KCNH5Q8NCM2 988 aa11.51□□□□□ -0.57
TRIM39-203ENST00000396547 MAP4K1Q92918 833 aa11.51□□□□□ -0.57
TRIM39-203ENST00000396547 EAF2Q96CJ1 260 aaPredicted RBP11.51□□□□□ -0.57
TRIM39-203ENST00000396547 ERO1AQ96HE7 468 aa11.51□□□□□ -0.57
TRIM39-203ENST00000396547 CHMP4AQ9BY43 222 aa11.51□□□□□ -0.57
TRIM39-203ENST00000396547 EPC1Q9H2F5 836 aa11.51□□□□□ -0.57
TRIM39-203ENST00000396547 TRPC5Q9UL62 973 aaPredicted RBP11.51□□□□□ -0.57
TRIM39-203ENST00000396547 ELP1O95163 1332 aa11.51□□□□□ -0.57
TRIM39-203ENST00000396547 COL5A2P05997 1499 aaPredicted RBP11.51□□□□□ -0.57
TRIM39-203ENST00000396547 EPB41L2O43491 1005 aaKnown RBP11.51□□□□□ -0.57
TRIM39-203ENST00000396547 STX1AQ16623 288 aa11.51□□□□□ -0.57
TRIM39-203ENST00000396547 ARHGAP29Q52LW3 1261 aa11.51□□□□□ -0.57
TRIM39-203ENST00000396547 CHST3Q7LGC8 479 aa11.51□□□□□ -0.57
TRIM39-203ENST00000396547 SEC62Q99442 399 aaKnown RBP11.51□□□□□ -0.57
TRIM39-203ENST00000396547 GOLPH3LQ9H4A5 285 aa11.51□□□□□ -0.57
TRIM39-203ENST00000396547 HTATSF1O43719 755 aaKnown RBP11.51□□□□□ -0.57
TRIM39-203ENST00000396547 TEFQ10587 303 aa11.51□□□□□ -0.57
TRIM39-203ENST00000396547 SYCP1Q15431 976 aa11.51□□□□□ -0.57
TRIM39-203ENST00000396547 BEND3Q5T5X7 828 aa11.51□□□□□ -0.57
TRIM39-203ENST00000396547 DNAJC2Q99543 621 aaKnown RBP11.51□□□□□ -0.57
TRIM39-203ENST00000396547 ZNF446Q9NWS9 450 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms