RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 CACNA1SQ13698 1873 aa18.86■□□□□ 0.61
VAMP1-202ENST00000396308 COL11A2P13942 1736 aaPredicted RBP18.86■□□□□ 0.61
VAMP1-202ENST00000396308 ECHDC1Q9NTX5 307 aa18.86■□□□□ 0.61
VAMP1-202ENST00000396308 STAP2Q9UGK3 403 aa18.86■□□□□ 0.61
VAMP1-202ENST00000396308 RIPOR2Q9Y4F9 1068 aa18.86■□□□□ 0.61
VAMP1-202ENST00000396308 PSDA5PKW4 1024 aaPredicted RBP18.85■□□□□ 0.61
VAMP1-202ENST00000396308 GLRX3O76003 335 aaKnown RBP18.85■□□□□ 0.61
VAMP1-202ENST00000396308 POLD1P28340 1107 aa18.85■□□□□ 0.61
VAMP1-202ENST00000396308 RPS8P62241 208 aaKnown RBP18.85■□□□□ 0.61
VAMP1-202ENST00000396308 GRAPQ13588 217 aa18.85■□□□□ 0.61
VAMP1-202ENST00000396308 PUM3Q15397 648 aaKnown RBP18.85■□□□□ 0.61
VAMP1-202ENST00000396308 ATP2B3Q16720 1220 aa18.85■□□□□ 0.61
VAMP1-202ENST00000396308 CRY2Q49AN0 593 aa18.85■□□□□ 0.61
VAMP1-202ENST00000396308 GORABQ5T7V8 394 aa18.85■□□□□ 0.61
VAMP1-202ENST00000396308 GRAPLQ8TC17 118 aaPredicted RBP18.85■□□□□ 0.61
VAMP1-202ENST00000396308 OTUD7AQ8TE49 926 aaPredicted RBP18.85■□□□□ 0.61
VAMP1-202ENST00000396308 NEUROD6Q96NK8 337 aa18.85■□□□□ 0.61
VAMP1-202ENST00000396308 BSDC1Q9NW68 430 aaPredicted RBP18.85■□□□□ 0.61
VAMP1-202ENST00000396308 SALL3Q9BXA9 1300 aa18.84■□□□□ 0.61
VAMP1-202ENST00000396308 TMC4Q7Z404 712 aa18.84■□□□□ 0.61
VAMP1-202ENST00000396308 EAF2Q96CJ1 260 aaPredicted RBP18.84■□□□□ 0.61
VAMP1-202ENST00000396308 ANKRD2Q9GZV1 360 aa18.84■□□□□ 0.61
VAMP1-202ENST00000396308 CCDC8Q9H0W5 538 aaPredicted RBP18.84■□□□□ 0.61
VAMP1-202ENST00000396308 DLEC1Q9Y238 1755 aa18.83■□□□□ 0.61
VAMP1-202ENST00000396308 A0A1B0GUL7 405 aa18.83■□□□□ 0.6
VAMP1-202ENST00000396308 EIF5BO60841 1220 aaKnown RBP18.83■□□□□ 0.6
VAMP1-202ENST00000396308 PDE8BO95263 885 aa18.83■□□□□ 0.6
VAMP1-202ENST00000396308 SLC5A1P13866 664 aa18.83■□□□□ 0.6
VAMP1-202ENST00000396308 NPR1P16066 1061 aa18.83■□□□□ 0.6
VAMP1-202ENST00000396308 R3HDM1Q15032 1099 aaKnown RBP18.83■□□□□ 0.6
VAMP1-202ENST00000396308 CASC1Q6TDU7 716 aa18.83■□□□□ 0.6
VAMP1-202ENST00000396308 MTFR1LQ9H019 292 aa18.83■□□□□ 0.6
VAMP1-202ENST00000396308 TMX4Q9H1E5 349 aaPredicted RBP18.83■□□□□ 0.6
VAMP1-202ENST00000396308 IFIT1P09914 478 aaKnown RBP18.82■□□□□ 0.6
VAMP1-202ENST00000396308 KCNJ4P48050 445 aa18.82■□□□□ 0.6
VAMP1-202ENST00000396308 CCDC158Q5M9N0 1113 aa18.82■□□□□ 0.6
VAMP1-202ENST00000396308 CELF1Q92879 486 aaKnown RBP18.82■□□□□ 0.6
VAMP1-202ENST00000396308 CRAMP1Q96RY5 1269 aa18.82■□□□□ 0.6
VAMP1-202ENST00000396308 LRRC37AA6NMS7 1700 aa18.82■□□□□ 0.6
VAMP1-202ENST00000396308 KIF13BQ9NQT8 1826 aa18.81■□□□□ 0.6
VAMP1-202ENST00000396308 KLRG2A4D1S0 409 aaPredicted RBP18.81■□□□□ 0.6
VAMP1-202ENST00000396308 TRIM6-TRIM34B2RNG4 842 aa18.81■□□□□ 0.6
VAMP1-202ENST00000396308 ALDH1B1P30837 517 aa18.81■□□□□ 0.6
VAMP1-202ENST00000396308 HOXA10P31260 410 aaPredicted RBP18.81■□□□□ 0.6
VAMP1-202ENST00000396308 CHRNDQ07001 517 aa18.81■□□□□ 0.6
VAMP1-202ENST00000396308 LPIN2Q92539 896 aa18.81■□□□□ 0.6
VAMP1-202ENST00000396308 C10orf71Q711Q0 1435 aa18.81■□□□□ 0.6
VAMP1-202ENST00000396308 MYH13Q9UKX3 1938 aa18.8■□□□□ 0.6
VAMP1-202ENST00000396308 H0YIN7 160 aa18.8■□□□□ 0.6
VAMP1-202ENST00000396308 BBOX1O75936 387 aa18.8■□□□□ 0.6
VAMP1-202ENST00000396308 CNTROBQ8N137 903 aa18.8■□□□□ 0.6
VAMP1-202ENST00000396308 MASTLQ96GX5 879 aa18.8■□□□□ 0.6
VAMP1-202ENST00000396308 DBNLQ9UJU6 430 aaKnown RBP18.8■□□□□ 0.6
VAMP1-202ENST00000396308 COL4A1P02462 1669 aa18.79■□□□□ 0.6
VAMP1-202ENST00000396308 ZBTB7AO95365 584 aa18.79■□□□□ 0.6
VAMP1-202ENST00000396308 TTC39AQ5SRH9 613 aa18.79■□□□□ 0.6
VAMP1-202ENST00000396308 TSHZ3Q63HK5 1081 aa18.79■□□□□ 0.6
VAMP1-202ENST00000396308 C2CD5Q86YS7 1000 aa18.79■□□□□ 0.6
VAMP1-202ENST00000396308 VGLL2Q8N8G2 317 aa18.79■□□□□ 0.6
VAMP1-202ENST00000396308 DBNDD2Q9BQY9 259 aa18.79■□□□□ 0.6
VAMP1-202ENST00000396308 TLR7Q9NYK1 1049 aaKnown RBP18.79■□□□□ 0.6
VAMP1-202ENST00000396308 CDC45O75419 566 aa18.78■□□□□ 0.6
VAMP1-202ENST00000396308 SRGNP10124 158 aa18.78■□□□□ 0.6
VAMP1-202ENST00000396308 GSPT1P15170 499 aaKnown RBP18.78■□□□□ 0.6
VAMP1-202ENST00000396308 TIMM10P62072 90 aa18.78■□□□□ 0.6
VAMP1-202ENST00000396308 PDGFDQ9GZP0 370 aaPredicted RBP18.78■□□□□ 0.6
VAMP1-202ENST00000396308 MINPP1Q9UNW1 487 aa18.78■□□□□ 0.6
VAMP1-202ENST00000396308 PPEF1O14829 653 aaPredicted RBP18.77■□□□□ 0.6
VAMP1-202ENST00000396308 ATP5JP18859 108 aa18.77■□□□□ 0.6
VAMP1-202ENST00000396308 UBE4AQ14139 1066 aa18.77■□□□□ 0.6
VAMP1-202ENST00000396308 STYK1Q6J9G0 422 aa18.77■□□□□ 0.6
VAMP1-202ENST00000396308 HELBQ8NG08 1087 aaPredicted RBP18.77■□□□□ 0.6
VAMP1-202ENST00000396308 PI4K2BQ8TCG2 481 aa18.77■□□□□ 0.6
VAMP1-202ENST00000396308 RILPL2Q969X0 211 aa18.77■□□□□ 0.6
VAMP1-202ENST00000396308 XAGE2Q96GT9 111 aa18.77■□□□□ 0.6
VAMP1-202ENST00000396308 ANKIB1Q9P2G1 1089 aa18.77■□□□□ 0.6
VAMP1-202ENST00000396308 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.77■□□□□ 0.6
VAMP1-202ENST00000396308 TAF5LO75529 589 aa18.76■□□□□ 0.59
VAMP1-202ENST00000396308 SDSP20132 328 aa18.76■□□□□ 0.59
VAMP1-202ENST00000396308 ZNF622Q969S3 477 aaKnown RBP eCLIP18.76■□□□□ 0.59
VAMP1-202ENST00000396308 XDHP47989 1333 aa18.75■□□□□ 0.59
VAMP1-202ENST00000396308 UQCRFS1P1P0C7P4 283 aa18.75■□□□□ 0.59
VAMP1-202ENST00000396308 CAVIN4Q5BKX8 364 aa18.75■□□□□ 0.59
VAMP1-202ENST00000396308 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.75■□□□□ 0.59
VAMP1-202ENST00000396308 CNKSR1Q969H4 720 aa18.75■□□□□ 0.59
VAMP1-202ENST00000396308 UPF2Q9HAU5 1272 aaKnown RBP18.75■□□□□ 0.59
VAMP1-202ENST00000396308 ATF5Q9Y2D1 282 aaPredicted RBP18.75■□□□□ 0.59
VAMP1-202ENST00000396308 FGFR2P21802 821 aa18.74■□□□□ 0.59
VAMP1-202ENST00000396308 VPS37DQ86XT2 251 aa18.74■□□□□ 0.59
VAMP1-202ENST00000396308 EVI5LQ96CN4 794 aa18.74■□□□□ 0.59
VAMP1-202ENST00000396308 BACH2Q9BYV9 841 aa18.74■□□□□ 0.59
VAMP1-202ENST00000396308 GNL3LQ9NVN8 582 aaKnown RBP18.74■□□□□ 0.59
VAMP1-202ENST00000396308 LEMD3Q9Y2U8 911 aa18.74■□□□□ 0.59
VAMP1-202ENST00000396308 MYH7P12883 1935 aa18.73■□□□□ 0.59
VAMP1-202ENST00000396308 HIP1O00291 1037 aa18.73■□□□□ 0.59
VAMP1-202ENST00000396308 ADORA1P30542 326 aa18.73■□□□□ 0.59
VAMP1-202ENST00000396308 C8orf34Q49A92 452 aa18.73■□□□□ 0.59
VAMP1-202ENST00000396308 DNAJC2Q99543 621 aaKnown RBP18.73■□□□□ 0.59
VAMP1-202ENST00000396308 BOLA2Q9H3K6 86 aa18.73■□□□□ 0.59
VAMP1-202ENST00000396308 ATP2B4P23634 1241 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms