RNA–Protein interactions for RNA: ENST00000396020.7

RPS29-202, Transcript of ribosomal protein S29, humanhuman

TSL 1 (best) BASIC

Gene RPS29, Length 7,062 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS29-202ENST00000396020 SHANK2Q9UPX8 1470 aa8.31□□□□□ -1.08
RPS29-202ENST00000396020 UBASH3AP57075 661 aa8.31□□□□□ -1.08
RPS29-202ENST00000396020 CCDC65Q8IXS2 484 aa8.31□□□□□ -1.08
RPS29-202ENST00000396020 USP16Q9Y5T5 823 aa8.31□□□□□ -1.08
RPS29-202ENST00000396020 STX6O43752 255 aa8.3□□□□□ -1.08
RPS29-202ENST00000396020 CWC25Q9NXE8 425 aaPredicted RBP8.3□□□□□ -1.08
RPS29-202ENST00000396020 LIMCH1Q9UPQ0 1083 aa8.3□□□□□ -1.08
RPS29-202ENST00000396020 NPATQ14207 1427 aa8.3□□□□□ -1.08
RPS29-202ENST00000396020 RARSP54136 660 aaKnown RBP8.3□□□□□ -1.08
RPS29-202ENST00000396020 TRIM47Q96LD4 638 aa8.3□□□□□ -1.08
RPS29-202ENST00000396020 TCP11L1Q9NUJ3 509 aa8.3□□□□□ -1.08
RPS29-202ENST00000396020 FAM83GA6ND36 823 aa8.3□□□□□ -1.08
RPS29-202ENST00000396020 Q6ZUG5 572 aa8.3□□□□□ -1.08
RPS29-202ENST00000396020 FAM170AA1A519 330 aa8.3□□□□□ -1.08
RPS29-202ENST00000396020 TTC12Q9H892 705 aaPredicted RBP8.3□□□□□ -1.08
RPS29-202ENST00000396020 SH2B1Q9NRF2 756 aaPredicted RBP8.3□□□□□ -1.08
RPS29-202ENST00000396020 PRAG1Q86YV5 1406 aa8.3□□□□□ -1.08
RPS29-202ENST00000396020 PHACTR2O75167 634 aa8.3□□□□□ -1.08
RPS29-202ENST00000396020 EEF2P13639 858 aaKnown RBP8.3□□□□□ -1.08
RPS29-202ENST00000396020 PPARDQ03181 441 aa8.3□□□□□ -1.08
RPS29-202ENST00000396020 CEP112Q8N8E3 955 aa8.3□□□□□ -1.08
RPS29-202ENST00000396020 PLIN2Q99541 437 aa8.3□□□□□ -1.08
RPS29-202ENST00000396020 SLC4A4Q9Y6R1 1079 aa8.3□□□□□ -1.08
RPS29-202ENST00000396020 SHROOM2Q13796 1616 aa8.3□□□□□ -1.08
RPS29-202ENST00000396020 BMS1Q14692 1282 aaKnown RBP8.3□□□□□ -1.08
RPS29-202ENST00000396020 TTF1Q15361 905 aaPredicted RBP8.3□□□□□ -1.08
RPS29-202ENST00000396020 ODF2LQ9ULJ1 636 aa8.3□□□□□ -1.08
RPS29-202ENST00000396020 SAMD9Q5K651 1589 aa8.3□□□□□ -1.08
RPS29-202ENST00000396020 MARCKSP29966 332 aaPredicted RBP8.29□□□□□ -1.08
RPS29-202ENST00000396020 MAP3K9P80192 1104 aa8.29□□□□□ -1.08
RPS29-202ENST00000396020 PDE4BQ07343 736 aa8.29□□□□□ -1.08
RPS29-202ENST00000396020 SMARCC1Q92922 1105 aaPredicted RBP8.29□□□□□ -1.08
RPS29-202ENST00000396020 CCDC114Q96M63 670 aa8.29□□□□□ -1.08
RPS29-202ENST00000396020 NEK1Q96PY6 1258 aa8.29□□□□□ -1.08
RPS29-202ENST00000396020 NUP160Q12769 1436 aa8.29□□□□□ -1.08
RPS29-202ENST00000396020 MSL1Q68DK7 614 aa8.29□□□□□ -1.08
RPS29-202ENST00000396020 SSH1Q8WYL5 1049 aa8.29□□□□□ -1.08
RPS29-202ENST00000396020 ATP2B3Q16720 1220 aa8.29□□□□□ -1.08
RPS29-202ENST00000396020 IFNL2Q8IZJ0 200 aa8.29□□□□□ -1.08
RPS29-202ENST00000396020 CCDC155Q8N6L0 562 aa8.29□□□□□ -1.08
RPS29-202ENST00000396020 DNAAF4Q8WXU2 420 aa8.29□□□□□ -1.08
RPS29-202ENST00000396020 TBC1D2Q9BYX2 928 aa8.29□□□□□ -1.08
RPS29-202ENST00000396020 POTEB2H3BUK9 544 aa8.29□□□□□ -1.08
RPS29-202ENST00000396020 JAG2Q9Y219 1238 aa8.29□□□□□ -1.08
RPS29-202ENST00000396020 TTC21AQ8NDW8 1320 aa8.29□□□□□ -1.08
RPS29-202ENST00000396020 PTPRKQ15262 1439 aa8.29□□□□□ -1.08
RPS29-202ENST00000396020 IDEP14735 1019 aa8.29□□□□□ -1.08
RPS29-202ENST00000396020 IQSEC3Q9UPP2 1182 aaPredicted RBP8.29□□□□□ -1.08
RPS29-202ENST00000396020 NCKAP5LQ9HCH0 1330 aa8.29□□□□□ -1.08
RPS29-202ENST00000396020 KIF5BP33176 963 aa8.28□□□□□ -1.08
RPS29-202ENST00000396020 DDX46Q7L014 1031 aaKnown RBP8.28□□□□□ -1.08
RPS29-202ENST00000396020 SPATA24Q86W54 205 aa8.28□□□□□ -1.08
RPS29-202ENST00000396020 NCOA7Q8NI08 942 aa8.28□□□□□ -1.08
RPS29-202ENST00000396020 SELENOOQ9BVL4 669 aa8.28□□□□□ -1.08
RPS29-202ENST00000396020 RNF41Q9H4P4 317 aaPredicted RBP8.28□□□□□ -1.08
RPS29-202ENST00000396020 SAP30BPQ9UHR5 308 aaKnown RBP8.28□□□□□ -1.08
RPS29-202ENST00000396020 CTNND2Q9UQB3 1225 aa8.28□□□□□ -1.08
RPS29-202ENST00000396020 MCM7P33993 719 aa8.28□□□□□ -1.08
RPS29-202ENST00000396020 GTF2A1P52655 376 aaPredicted RBP8.28□□□□□ -1.08
RPS29-202ENST00000396020 CETN1Q12798 172 aa8.28□□□□□ -1.08
RPS29-202ENST00000396020 CCDC174Q6PII3 467 aa8.28□□□□□ -1.08
RPS29-202ENST00000396020 USP48Q86UV5 1035 aa8.28□□□□□ -1.08
RPS29-202ENST00000396020 TBCAO75347 108 aaKnown RBP8.28□□□□□ -1.08
RPS29-202ENST00000396020 CHRNA2Q15822 529 aa8.28□□□□□ -1.08
RPS29-202ENST00000396020 SH3BP5O60239 455 aa8.28□□□□□ -1.08
RPS29-202ENST00000396020 IGHDP01880 384 aa8.28□□□□□ -1.08
RPS29-202ENST00000396020 C6orf163Q5TEZ5 329 aa8.28□□□□□ -1.08
RPS29-202ENST00000396020 AOPEPQ8N6M6 819 aa8.28□□□□□ -1.08
RPS29-202ENST00000396020 SREK1Q8WXA9 508 aaKnown RBP8.28□□□□□ -1.08
RPS29-202ENST00000396020 FERMT1Q9BQL6 677 aa8.28□□□□□ -1.08
RPS29-202ENST00000396020 MAK16Q9BXY0 300 aaKnown RBP8.28□□□□□ -1.08
RPS29-202ENST00000396020 ZMYND15Q9H091 742 aa8.28□□□□□ -1.08
RPS29-202ENST00000396020 RASAL2Q9UJF2 1139 aa8.28□□□□□ -1.08
RPS29-202ENST00000396020 CIZ1Q9ULV3 898 aaPredicted RBP8.28□□□□□ -1.08
RPS29-202ENST00000396020 ZCCHC11Q5TAX3 1644 aaKnown RBP8.28□□□□□ -1.08
RPS29-202ENST00000396020 PIK3R4Q99570 1358 aa8.28□□□□□ -1.08
RPS29-202ENST00000396020 FAM13AO94988 1023 aa8.28□□□□□ -1.08
RPS29-202ENST00000396020 HLA-DOAP06340 250 aa8.28□□□□□ -1.08
RPS29-202ENST00000396020 SYKP43405 635 aa8.28□□□□□ -1.08
RPS29-202ENST00000396020 GSDMDP57764 484 aa8.28□□□□□ -1.08
RPS29-202ENST00000396020 IFI16Q16666 785 aaKnown RBP8.28□□□□□ -1.08
RPS29-202ENST00000396020 KIAA0753Q2KHM9 967 aa8.28□□□□□ -1.08
RPS29-202ENST00000396020 DBF4Q9UBU7 674 aaPredicted RBP8.28□□□□□ -1.08
RPS29-202ENST00000396020 KRT5P13647 590 aa8.28□□□□□ -1.08
RPS29-202ENST00000396020 ERCC5P28715 1186 aaPredicted RBP8.28□□□□□ -1.08
RPS29-202ENST00000396020 KARSQ15046 597 aaKnown RBP8.28□□□□□ -1.08
RPS29-202ENST00000396020 STXBP4Q6ZWJ1 553 aa8.28□□□□□ -1.08
RPS29-202ENST00000396020 CALCOCO1Q9P1Z2 691 aa8.28□□□□□ -1.08
RPS29-202ENST00000396020 RIMBP2O15034 1052 aa8.27□□□□□ -1.08
RPS29-202ENST00000396020 IARSP41252 1262 aaKnown RBP8.27□□□□□ -1.08
RPS29-202ENST00000396020 WTAPQ15007 396 aa8.27□□□□□ -1.08
RPS29-202ENST00000396020 DNAJC21Q5F1R6 531 aaKnown RBP8.27□□□□□ -1.08
RPS29-202ENST00000396020 SPECC1LQ69YQ0 1117 aa8.27□□□□□ -1.08
RPS29-202ENST00000396020 SIRT1Q96EB6 747 aa8.27□□□□□ -1.08
RPS29-202ENST00000396020 UTP14AQ9BVJ6 771 aaKnown RBP8.27□□□□□ -1.08
RPS29-202ENST00000396020 MBIPQ9NS73 344 aa8.27□□□□□ -1.08
RPS29-202ENST00000396020 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.27□□□□□ -1.09
RPS29-202ENST00000396020 FBLN1P23142 703 aa8.27□□□□□ -1.09
RPS29-202ENST00000396020 GNG11P61952 73 aa8.27□□□□□ -1.09
RPS29-202ENST00000396020 DAAM2Q86T65 1068 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms