RNA–Protein interactions for RNA: ENST00000395469.6

SNCAIP-205, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 3,126 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-205ENST00000395469 KCNB2Q92953 911 aa13.65□□□□□ -0.22
SNCAIP-205ENST00000395469 FEZ1Q99689 392 aa13.65□□□□□ -0.22
SNCAIP-205ENST00000395469 ZBTB3Q9H5J0 574 aa13.65□□□□□ -0.22
SNCAIP-205ENST00000395469 CNPY4Q8N129 248 aa13.64□□□□□ -0.23
SNCAIP-205ENST00000395469 OGFRQ9NZT2 677 aa13.64□□□□□ -0.23
SNCAIP-205ENST00000395469 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.64□□□□□ -0.23
SNCAIP-205ENST00000395469 A1BGP04217 495 aa13.64□□□□□ -0.23
SNCAIP-205ENST00000395469 MMP14P50281 582 aa13.64□□□□□ -0.23
SNCAIP-205ENST00000395469 UBE2HP62256 183 aa13.64□□□□□ -0.23
SNCAIP-205ENST00000395469 PRDM11Q9NQV5 511 aa13.64□□□□□ -0.23
SNCAIP-205ENST00000395469 NBPF26B4DH59 902 aa13.64□□□□□ -0.23
SNCAIP-205ENST00000395469 TAF5LO75529 589 aa13.64□□□□□ -0.23
SNCAIP-205ENST00000395469 SLFN14P0C7P3 912 aa13.64□□□□□ -0.23
SNCAIP-205ENST00000395469 CCDC183Q5T5S1 534 aa13.64□□□□□ -0.23
SNCAIP-205ENST00000395469 NBPF14Q5TI25 921 aa13.64□□□□□ -0.23
SNCAIP-205ENST00000395469 NBPF10Q6P3W6 841 aaKnown RBP13.64□□□□□ -0.23
SNCAIP-205ENST00000395469 CADPS2Q86UW7 1296 aa13.64□□□□□ -0.23
SNCAIP-205ENST00000395469 NBPF15Q8N660 670 aa13.64□□□□□ -0.23
SNCAIP-205ENST00000395469 SCN11AQ9UI33 1791 aa13.63□□□□□ -0.23
SNCAIP-205ENST00000395469 MYCNP04198 464 aaPredicted RBP13.63□□□□□ -0.23
SNCAIP-205ENST00000395469 HCLS1P14317 486 aaPredicted RBP13.63□□□□□ -0.23
SNCAIP-205ENST00000395469 ATP5JP18859 108 aa13.63□□□□□ -0.23
SNCAIP-205ENST00000395469 PLCB2Q00722 1185 aa13.63□□□□□ -0.23
SNCAIP-205ENST00000395469 GIMAP6Q6P9H5 292 aa13.63□□□□□ -0.23
SNCAIP-205ENST00000395469 CDC37L1Q7L3B6 337 aa13.63□□□□□ -0.23
SNCAIP-205ENST00000395469 PLBD2Q8NHP8 589 aa13.63□□□□□ -0.23
SNCAIP-205ENST00000395469 LRRC2Q9BYS8 371 aa13.63□□□□□ -0.23
SNCAIP-205ENST00000395469 BCCIPQ9P287 314 aaKnown RBP eCLIP13.63□□□□□ -0.23
SNCAIP-205ENST00000395469 KIF1AQ12756 1690 aa13.63□□□□□ -0.23
SNCAIP-205ENST00000395469 ALS2Q96Q42 1657 aa13.63□□□□□ -0.23
SNCAIP-205ENST00000395469 MED23Q9ULK4 1368 aa13.63□□□□□ -0.23
SNCAIP-205ENST00000395469 TULP2O00295 520 aa13.63□□□□□ -0.23
SNCAIP-205ENST00000395469 RPS6KB1P23443 525 aa13.63□□□□□ -0.23
SNCAIP-205ENST00000395469 TMEM87AQ8NBN3 555 aa13.63□□□□□ -0.23
SNCAIP-205ENST00000395469 TIMM10P62072 90 aa13.62□□□□□ -0.23
SNCAIP-205ENST00000395469 COL15A1P39059 1388 aa13.62□□□□□ -0.23
SNCAIP-205ENST00000395469 TOB2Q14106 344 aaPredicted RBP13.62□□□□□ -0.23
SNCAIP-205ENST00000395469 ZNF594Q96JF6 807 aaPredicted RBP13.62□□□□□ -0.23
SNCAIP-205ENST00000395469 USP25Q9UHP3 1055 aa13.62□□□□□ -0.23
SNCAIP-205ENST00000395469 TNS3Q68CZ2 1445 aa13.62□□□□□ -0.23
SNCAIP-205ENST00000395469 SPATA31A3Q5VYP0 1347 aa13.62□□□□□ -0.23
SNCAIP-205ENST00000395469 RABL6Q3YEC7 729 aaPredicted RBP13.62□□□□□ -0.23
SNCAIP-205ENST00000395469 STRN4Q9NRL3 753 aa13.62□□□□□ -0.23
SNCAIP-205ENST00000395469 ADAMTS7Q9UKP4 1686 aa13.61□□□□□ -0.23
SNCAIP-205ENST00000395469 GOLIM4O00461 696 aa13.61□□□□□ -0.23
SNCAIP-205ENST00000395469 CLGNO14967 610 aa13.61□□□□□ -0.23
SNCAIP-205ENST00000395469 PSEN1P49768 467 aa13.61□□□□□ -0.23
SNCAIP-205ENST00000395469 ZCRB1Q8TBF4 217 aaKnown RBP13.61□□□□□ -0.23
SNCAIP-205ENST00000395469 TRERF1Q96PN7 1200 aa13.61□□□□□ -0.23
SNCAIP-205ENST00000395469 CCDC85AQ96PX6 553 aaPredicted RBP13.61□□□□□ -0.23
SNCAIP-205ENST00000395469 HSP90B1P14625 803 aaKnown RBP13.61□□□□□ -0.23
SNCAIP-205ENST00000395469 NOLC1Q14978 699 aaKnown RBP eCLIP13.61□□□□□ -0.23
SNCAIP-205ENST00000395469 CALCOCO1Q9P1Z2 691 aa13.61□□□□□ -0.23
SNCAIP-205ENST00000395469 TFIP11Q9UBB9 837 aaKnown RBP13.6□□□□□ -0.23
SNCAIP-205ENST00000395469 ERICH4A6NGS2 130 aa13.6□□□□□ -0.23
SNCAIP-205ENST00000395469 JAK2O60674 1132 aa13.6□□□□□ -0.23
SNCAIP-205ENST00000395469 CASP7P55210 303 aa13.6□□□□□ -0.23
SNCAIP-205ENST00000395469 ANKRD1Q15327 319 aa13.6□□□□□ -0.23
SNCAIP-205ENST00000395469 ANKRD7Q92527 254 aa13.6□□□□□ -0.23
SNCAIP-205ENST00000395469 SNRKQ9NRH2 765 aa13.6□□□□□ -0.23
SNCAIP-205ENST00000395469 ZNF609O15014 1411 aa13.59□□□□□ -0.23
SNCAIP-205ENST00000395469 PPFIA3O75145 1194 aa13.59□□□□□ -0.23
SNCAIP-205ENST00000395469 LRRC24Q50LG9 513 aa13.59□□□□□ -0.23
SNCAIP-205ENST00000395469 PIBF1Q8WXW3 757 aa13.59□□□□□ -0.23
SNCAIP-205ENST00000395469 DDX11Q96FC9 970 aa13.59□□□□□ -0.23
SNCAIP-205ENST00000395469 NEK1Q96PY6 1258 aa13.59□□□□□ -0.23
SNCAIP-205ENST00000395469 TSPYL1Q9H0U9 437 aa13.59□□□□□ -0.23
SNCAIP-205ENST00000395469 CWC25Q9NXE8 425 aaPredicted RBP13.59□□□□□ -0.23
SNCAIP-205ENST00000395469 CYP21A2P08686 494 aa13.59□□□□□ -0.23
SNCAIP-205ENST00000395469 FOSBP53539 338 aa13.59□□□□□ -0.23
SNCAIP-205ENST00000395469 FOXO4P98177 505 aa13.59□□□□□ -0.23
SNCAIP-205ENST00000395469 TTC6Q86TZ1 520 aa13.59□□□□□ -0.23
SNCAIP-205ENST00000395469 HMG20BQ9P0W2 317 aa13.59□□□□□ -0.23
SNCAIP-205ENST00000395469 CAMK4Q16566 473 aa13.59□□□□□ -0.23
SNCAIP-205ENST00000395469 MCMDC2Q4G0Z9 681 aa13.59□□□□□ -0.23
SNCAIP-205ENST00000395469 Q6ZUG5 572 aa13.59□□□□□ -0.23
SNCAIP-205ENST00000395469 HAUS7Q99871 368 aa13.59□□□□□ -0.23
SNCAIP-205ENST00000395469 GEMIN8Q9NWZ8 242 aaKnown RBP13.59□□□□□ -0.23
SNCAIP-205ENST00000395469 KRT85P78386 507 aa13.58□□□□□ -0.24
SNCAIP-205ENST00000395469 YY1AP1Q9H869 796 aa13.58□□□□□ -0.24
SNCAIP-205ENST00000395469 BRINP3Q76B58 766 aa13.58□□□□□ -0.24
SNCAIP-205ENST00000395469 ATG9AQ7Z3C6 839 aa13.58□□□□□ -0.24
SNCAIP-205ENST00000395469 C17orf53Q8N3J3 647 aaPredicted RBP13.58□□□□□ -0.24
SNCAIP-205ENST00000395469 AFDNP55196 1824 aaKnown RBP13.58□□□□□ -0.24
SNCAIP-205ENST00000395469 H7C1W4 665 aa13.57□□□□□ -0.24
SNCAIP-205ENST00000395469 PDCP20941 246 aa13.57□□□□□ -0.24
SNCAIP-205ENST00000395469 TERF2Q15554 542 aa13.57□□□□□ -0.24
SNCAIP-205ENST00000395469 BRF1Q92994 677 aa13.57□□□□□ -0.24
SNCAIP-205ENST00000395469 PUS3Q9BZE2 481 aaKnown RBP13.57□□□□□ -0.24
SNCAIP-205ENST00000395469 PCDH11XQ9BZA7 1347 aa13.57□□□□□ -0.24
SNCAIP-205ENST00000395469 PCDH11YQ9BZA8 1340 aa13.57□□□□□ -0.24
SNCAIP-205ENST00000395469 COL18A1P39060 1754 aa13.57□□□□□ -0.24
SNCAIP-205ENST00000395469 LMTK3Q96Q04 1460 aa13.57□□□□□ -0.24
SNCAIP-205ENST00000395469 TNNT3P45378 269 aaPredicted RBP13.57□□□□□ -0.24
SNCAIP-205ENST00000395469 KBTBD3Q8NAB2 608 aa13.57□□□□□ -0.24
SNCAIP-205ENST00000395469 PAG1Q9NWQ8 432 aa13.57□□□□□ -0.24
SNCAIP-205ENST00000395469 A0A0G2JLW4 131 aa13.57□□□□□ -0.24
SNCAIP-205ENST00000395469 GOLGA6L4A6NEF3 574 aa13.56□□□□□ -0.24
SNCAIP-205ENST00000395469 ADCY5O95622 1261 aa13.56□□□□□ -0.24
SNCAIP-205ENST00000395469 KRT32Q14532 448 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms