RNA–Protein interactions for RNA: ENST00000395360.6

RAPGEF3-203, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 2,325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-203ENST00000395360 STX6O43752 255 aa18.53■□□□□ 0.56
RAPGEF3-203ENST00000395360 HMGB2P26583 209 aaKnown RBP18.53■□□□□ 0.56
RAPGEF3-203ENST00000395360 PSMA5P28066 241 aa18.53■□□□□ 0.56
RAPGEF3-203ENST00000395360 COL9A3Q14050 684 aaPredicted RBP18.53■□□□□ 0.56
RAPGEF3-203ENST00000395360 CCDC191Q8NCU4 936 aa18.53■□□□□ 0.56
RAPGEF3-203ENST00000395360 ZSCAN31Q96LW9 406 aaPredicted RBP18.53■□□□□ 0.56
RAPGEF3-203ENST00000395360 TCHHQ07283 1943 aa18.53■□□□□ 0.56
RAPGEF3-203ENST00000395360 ME3Q16798 604 aa18.52■□□□□ 0.56
RAPGEF3-203ENST00000395360 SH2B1Q9NRF2 756 aaPredicted RBP18.52■□□□□ 0.56
RAPGEF3-203ENST00000395360 NUP188Q5SRE5 1749 aa18.52■□□□□ 0.56
RAPGEF3-203ENST00000395360 DTNBO60941 627 aa18.52■□□□□ 0.56
RAPGEF3-203ENST00000395360 TAF5LO75529 589 aa18.52■□□□□ 0.56
RAPGEF3-203ENST00000395360 APBA3O96018 575 aa18.52■□□□□ 0.56
RAPGEF3-203ENST00000395360 ZSCAN22P10073 491 aaPredicted RBP18.52■□□□□ 0.56
RAPGEF3-203ENST00000395360 ATG9AQ7Z3C6 839 aa18.52■□□□□ 0.56
RAPGEF3-203ENST00000395360 ZNF330Q9Y3S2 320 aaPredicted RBP18.52■□□□□ 0.56
RAPGEF3-203ENST00000395360 SYCE3A1L190 88 aa18.51■□□□□ 0.55
RAPGEF3-203ENST00000395360 CHGBP05060 677 aa18.51■□□□□ 0.55
RAPGEF3-203ENST00000395360 GJB2P29033 226 aa18.51■□□□□ 0.55
RAPGEF3-203ENST00000395360 NEUROD6Q96NK8 337 aa18.51■□□□□ 0.55
RAPGEF3-203ENST00000395360 HAUS7Q99871 368 aa18.51■□□□□ 0.55
RAPGEF3-203ENST00000395360 TAF6LQ9Y6J9 622 aa18.51■□□□□ 0.55
RAPGEF3-203ENST00000395360 ATP6V1AP38606 617 aa18.51■□□□□ 0.55
RAPGEF3-203ENST00000395360 SF3B2Q13435 895 aaKnown RBP18.51■□□□□ 0.55
RAPGEF3-203ENST00000395360 SLC27A3Q5K4L6 730 aa18.51■□□□□ 0.55
RAPGEF3-203ENST00000395360 DDX46Q7L014 1031 aaKnown RBP18.51■□□□□ 0.55
RAPGEF3-203ENST00000395360 USP48Q86UV5 1035 aa18.51■□□□□ 0.55
RAPGEF3-203ENST00000395360 SLC4A9Q96Q91 983 aa18.51■□□□□ 0.55
RAPGEF3-203ENST00000395360 TPCN1Q9ULQ1 816 aa18.51■□□□□ 0.55
RAPGEF3-203ENST00000395360 TJP1Q07157 1748 aa18.5■□□□□ 0.55
RAPGEF3-203ENST00000395360 BLOC1S2Q6QNY1 142 aa18.5■□□□□ 0.55
RAPGEF3-203ENST00000395360 ANP32BQ92688 251 aaKnown RBP18.5■□□□□ 0.55
RAPGEF3-203ENST00000395360 TRIM44Q96DX7 344 aaPredicted RBP18.5■□□□□ 0.55
RAPGEF3-203ENST00000395360 TCEANC2Q96MN5 208 aa18.5■□□□□ 0.55
RAPGEF3-203ENST00000395360 ST3GAL1Q11201 340 aa18.5■□□□□ 0.55
RAPGEF3-203ENST00000395360 ZNF594Q96JF6 807 aaPredicted RBP18.5■□□□□ 0.55
RAPGEF3-203ENST00000395360 GADD45BO75293 160 aaPredicted RBP18.49■□□□□ 0.55
RAPGEF3-203ENST00000395360 STARD3NLO95772 234 aa18.49■□□□□ 0.55
RAPGEF3-203ENST00000395360 TIMM10P62072 90 aa18.49■□□□□ 0.55
RAPGEF3-203ENST00000395360 NECAB1Q8N987 351 aa18.49■□□□□ 0.55
RAPGEF3-203ENST00000395360 SEC62Q99442 399 aaKnown RBP18.49■□□□□ 0.55
RAPGEF3-203ENST00000395360 RBSNQ9H1K0 784 aa18.49■□□□□ 0.55
RAPGEF3-203ENST00000395360 HMG20BQ9P0W2 317 aa18.49■□□□□ 0.55
RAPGEF3-203ENST00000395360 CCNL1Q9UK58 526 aaPredicted RBP18.49■□□□□ 0.55
RAPGEF3-203ENST00000395360 IL15P40933 162 aaPredicted RBP18.49■□□□□ 0.55
RAPGEF3-203ENST00000395360 LRRC24Q50LG9 513 aa18.49■□□□□ 0.55
RAPGEF3-203ENST00000395360 LRSAM1Q6UWE0 723 aa18.49■□□□□ 0.55
RAPGEF3-203ENST00000395360 F13A1P00488 732 aa18.48■□□□□ 0.55
RAPGEF3-203ENST00000395360 CCDC173Q0VFZ6 552 aa18.48■□□□□ 0.55
RAPGEF3-203ENST00000395360 CCDC129Q6ZRS4 1044 aa18.48■□□□□ 0.55
RAPGEF3-203ENST00000395360 DNAJC10Q8IXB1 793 aa18.48■□□□□ 0.55
RAPGEF3-203ENST00000395360 CNPY2Q9Y2B0 182 aa18.48■□□□□ 0.55
RAPGEF3-203ENST00000395360 ZNF609O15014 1411 aa18.48■□□□□ 0.55
RAPGEF3-203ENST00000395360 RPS6KB1P23443 525 aa18.48■□□□□ 0.55
RAPGEF3-203ENST00000395360 RFX7Q2KHR2 1363 aa18.47■□□□□ 0.55
RAPGEF3-203ENST00000395360 EYA2O00167 538 aa18.47■□□□□ 0.55
RAPGEF3-203ENST00000395360 TSGA10IPQ3SY00 556 aa18.47■□□□□ 0.55
RAPGEF3-203ENST00000395360 MCMDC2Q4G0Z9 681 aa18.47■□□□□ 0.55
RAPGEF3-203ENST00000395360 USPL1Q5W0Q7 1092 aa18.47■□□□□ 0.55
RAPGEF3-203ENST00000395360 KBTBD3Q8NAB2 608 aa18.47■□□□□ 0.55
RAPGEF3-203ENST00000395360 BAG6P46379 1132 aa18.46■□□□□ 0.55
RAPGEF3-203ENST00000395360 TCIRG1Q13488 830 aa18.46■□□□□ 0.55
RAPGEF3-203ENST00000395360 ITPK1Q13572 414 aa18.46■□□□□ 0.55
RAPGEF3-203ENST00000395360 ANKRD1Q15327 319 aa18.46■□□□□ 0.55
RAPGEF3-203ENST00000395360 GPR108Q9NPR9 543 aa18.46■□□□□ 0.55
RAPGEF3-203ENST00000395360 ATP6V1DQ9Y5K8 247 aa18.46■□□□□ 0.55
RAPGEF3-203ENST00000395360 COL5A3P25940 1745 aaPredicted RBP18.46■□□□□ 0.55
RAPGEF3-203ENST00000395360 GOLIM4O00461 696 aa18.46■□□□□ 0.55
RAPGEF3-203ENST00000395360 CYP19A1P11511 503 aaPredicted RBP18.46■□□□□ 0.55
RAPGEF3-203ENST00000395360 TMEM87AQ8NBN3 555 aa18.46■□□□□ 0.55
RAPGEF3-203ENST00000395360 ISCA1Q9BUE6 129 aa18.46■□□□□ 0.55
RAPGEF3-203ENST00000395360 TXNRD1Q16881 649 aa18.45■□□□□ 0.54
RAPGEF3-203ENST00000395360 SYAP1Q96A49 352 aaPredicted RBP18.45■□□□□ 0.54
RAPGEF3-203ENST00000395360 PPP1R9BQ96SB3 815 aa18.45■□□□□ 0.54
RAPGEF3-203ENST00000395360 PUS3Q9BZE2 481 aaKnown RBP18.45■□□□□ 0.54
RAPGEF3-203ENST00000395360 PAG1Q9NWQ8 432 aa18.45■□□□□ 0.54
RAPGEF3-203ENST00000395360 MTMR6Q9Y217 621 aa18.45■□□□□ 0.54
RAPGEF3-203ENST00000395360 TOB2Q14106 344 aaPredicted RBP18.45■□□□□ 0.54
RAPGEF3-203ENST00000395360 A0A1B0GUL7 405 aa18.44■□□□□ 0.54
RAPGEF3-203ENST00000395360 KRT32Q14532 448 aa18.44■□□□□ 0.54
RAPGEF3-203ENST00000395360 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.44■□□□□ 0.54
RAPGEF3-203ENST00000395360 CNTNAP4Q9C0A0 1308 aa18.44■□□□□ 0.54
RAPGEF3-203ENST00000395360 VPS37CA5D8V6 355 aaPredicted RBP18.44■□□□□ 0.54
RAPGEF3-203ENST00000395360 ESPNB1AK53 854 aa18.44■□□□□ 0.54
RAPGEF3-203ENST00000395360 CIAO1O76071 339 aa18.44■□□□□ 0.54
RAPGEF3-203ENST00000395360 CCDC57Q2TAC2 916 aa18.44■□□□□ 0.54
RAPGEF3-203ENST00000395360 TPRNQ4KMQ1 711 aa18.44■□□□□ 0.54
RAPGEF3-203ENST00000395360 KIF6Q6ZMV9 814 aa18.44■□□□□ 0.54
RAPGEF3-203ENST00000395360 CAMKK2Q96RR4 588 aa18.44■□□□□ 0.54
RAPGEF3-203ENST00000395360 ALDH8A1Q9H2A2 487 aaPredicted RBP18.44■□□□□ 0.54
RAPGEF3-203ENST00000395360 TAF1LQ8IZX4 1826 aa18.43■□□□□ 0.54
RAPGEF3-203ENST00000395360 FIBPO43427 364 aa18.43■□□□□ 0.54
RAPGEF3-203ENST00000395360 SLFNL1Q499Z3 407 aa18.43■□□□□ 0.54
RAPGEF3-203ENST00000395360 FAM89AQ96GI7 184 aa18.43■□□□□ 0.54
RAPGEF3-203ENST00000395360 NEK1Q96PY6 1258 aa18.43■□□□□ 0.54
RAPGEF3-203ENST00000395360 U3KPZ7 1027 aaPredicted RBP18.43■□□□□ 0.54
RAPGEF3-203ENST00000395360 RREB1Q92766 1687 aa18.43■□□□□ 0.54
RAPGEF3-203ENST00000395360 CYP21A2P08686 494 aa18.43■□□□□ 0.54
RAPGEF3-203ENST00000395360 RC3H1Q5TC82 1133 aaKnown RBP18.43■□□□□ 0.54
RAPGEF3-203ENST00000395360 LARP1BQ659C4 914 aaKnown RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms