RNA–Protein interactions for RNA: ENST00000395358.7

RAPGEF3-202, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-202ENST00000395358 RIC3Q7Z5B4 369 aa13.18□□□□□ -0.3
RAPGEF3-202ENST00000395358 FBXO18Q8NFZ0 1043 aa13.18□□□□□ -0.3
RAPGEF3-202ENST00000395358 ERCC4Q92889 916 aaPredicted RBP13.18□□□□□ -0.3
RAPGEF3-202ENST00000395358 PSMD1Q99460 953 aa13.18□□□□□ -0.3
RAPGEF3-202ENST00000395358 C1orf115Q9H7X2 142 aa13.18□□□□□ -0.3
RAPGEF3-202ENST00000395358 NWD1Q149M9 1564 aa13.18□□□□□ -0.3
RAPGEF3-202ENST00000395358 RLBP1P12271 317 aa13.18□□□□□ -0.3
RAPGEF3-202ENST00000395358 ACTN2P35609 894 aa13.18□□□□□ -0.3
RAPGEF3-202ENST00000395358 NAA25Q14CX7 972 aa13.18□□□□□ -0.3
RAPGEF3-202ENST00000395358 NFATC2IPQ8NCF5 419 aa13.18□□□□□ -0.3
RAPGEF3-202ENST00000395358 NEMFO60524 1076 aa13.17□□□□□ -0.3
RAPGEF3-202ENST00000395358 SPATA31A6Q5VVP1 1343 aa13.17□□□□□ -0.3
RAPGEF3-202ENST00000395358 USP32Q8NFA0 1604 aa13.17□□□□□ -0.3
RAPGEF3-202ENST00000395358 PNMA6AP0CW24 399 aaPredicted RBP13.17□□□□□ -0.3
RAPGEF3-202ENST00000395358 NOP2P46087 812 aaKnown RBP13.17□□□□□ -0.3
RAPGEF3-202ENST00000395358 UNC5CLQ8IV45 518 aa13.17□□□□□ -0.3
RAPGEF3-202ENST00000395358 FAM200AQ8TCP9 573 aa13.17□□□□□ -0.3
RAPGEF3-202ENST00000395358 ZCCHC17Q9NP64 241 aaKnown RBP13.17□□□□□ -0.3
RAPGEF3-202ENST00000395358 TRPC5Q9UL62 973 aaPredicted RBP13.17□□□□□ -0.3
RAPGEF3-202ENST00000395358 FMN2Q9NZ56 1722 aa13.17□□□□□ -0.3
RAPGEF3-202ENST00000395358 STARD3NLO95772 234 aa13.17□□□□□ -0.3
RAPGEF3-202ENST00000395358 GBP2P32456 591 aaPredicted RBP13.17□□□□□ -0.3
RAPGEF3-202ENST00000395358 DNAI1Q9UI46 699 aa13.17□□□□□ -0.3
RAPGEF3-202ENST00000395358 NOB1Q9ULX3 412 aaKnown RBP13.17□□□□□ -0.3
RAPGEF3-202ENST00000395358 KIF1AQ12756 1690 aa13.16□□□□□ -0.3
RAPGEF3-202ENST00000395358 GADD45BO75293 160 aaPredicted RBP13.16□□□□□ -0.3
RAPGEF3-202ENST00000395358 SF3B2Q13435 895 aaKnown RBP13.16□□□□□ -0.3
RAPGEF3-202ENST00000395358 ALDH1L2Q3SY69 923 aa13.16□□□□□ -0.3
RAPGEF3-202ENST00000395358 IRAK4Q9NWZ3 460 aa13.16□□□□□ -0.3
RAPGEF3-202ENST00000395358 A0A1B0GUA9 196 aa13.16□□□□□ -0.3
RAPGEF3-202ENST00000395358 SHTN1A0MZ66 631 aa13.16□□□□□ -0.3
RAPGEF3-202ENST00000395358 EIF3CLB5ME19 914 aaKnown RBP13.16□□□□□ -0.3
RAPGEF3-202ENST00000395358 LIG3P49916 1009 aa13.16□□□□□ -0.3
RAPGEF3-202ENST00000395358 RILPL2Q969X0 211 aa13.16□□□□□ -0.3
RAPGEF3-202ENST00000395358 EIF3CQ99613 913 aaKnown RBP13.16□□□□□ -0.3
RAPGEF3-202ENST00000395358 CLNS1AP54105 237 aaKnown RBP13.16□□□□□ -0.3
RAPGEF3-202ENST00000395358 JAKMIP3Q5VZ66 844 aa13.16□□□□□ -0.3
RAPGEF3-202ENST00000395358 ZSWIM4Q9H7M6 989 aa13.16□□□□□ -0.3
RAPGEF3-202ENST00000395358 C9orf78Q9NZ63 289 aaPredicted RBP13.16□□□□□ -0.3
RAPGEF3-202ENST00000395358 SETD1AO15047 1707 aaKnown RBP13.16□□□□□ -0.3
RAPGEF3-202ENST00000395358 MYOM1P52179 1685 aa13.16□□□□□ -0.3
RAPGEF3-202ENST00000395358 SSH2Q76I76 1423 aa13.15□□□□□ -0.3
RAPGEF3-202ENST00000395358 CCP110O43303 1012 aa13.15□□□□□ -0.3
RAPGEF3-202ENST00000395358 GCKP35557 465 aa13.15□□□□□ -0.3
RAPGEF3-202ENST00000395358 UBE2HP62256 183 aa13.15□□□□□ -0.3
RAPGEF3-202ENST00000395358 LUZP1Q86V48 1076 aa13.15□□□□□ -0.3
RAPGEF3-202ENST00000395358 RNF217Q8TC41 542 aa13.15□□□□□ -0.3
RAPGEF3-202ENST00000395358 SSH1Q8WYL5 1049 aa13.15□□□□□ -0.3
RAPGEF3-202ENST00000395358 LGR6Q9HBX8 967 aa13.15□□□□□ -0.3
RAPGEF3-202ENST00000395358 HMMRO75330 724 aa13.15□□□□□ -0.3
RAPGEF3-202ENST00000395358 HMGB2P26583 209 aaKnown RBP13.15□□□□□ -0.3
RAPGEF3-202ENST00000395358 ACSBG1Q96GR2 724 aa13.15□□□□□ -0.3
RAPGEF3-202ENST00000395358 VEZTQ9HBM0 779 aa13.15□□□□□ -0.3
RAPGEF3-202ENST00000395358 SPINK5Q9NQ38 1064 aaPredicted RBP13.15□□□□□ -0.3
RAPGEF3-202ENST00000395358 BABAM1Q9NWV8 329 aa13.15□□□□□ -0.3
RAPGEF3-202ENST00000395358 MYL6BP14649 208 aa13.14□□□□□ -0.31
RAPGEF3-202ENST00000395358 PHKG2P15735 406 aa13.14□□□□□ -0.31
RAPGEF3-202ENST00000395358 ZNF165P49910 485 aa13.14□□□□□ -0.31
RAPGEF3-202ENST00000395358 CLCN6P51797 869 aa13.14□□□□□ -0.31
RAPGEF3-202ENST00000395358 SLC39A6Q13433 755 aa13.14□□□□□ -0.31
RAPGEF3-202ENST00000395358 ATF7IPQ6VMQ6 1270 aa13.14□□□□□ -0.31
RAPGEF3-202ENST00000395358 CNPY2Q9Y2B0 182 aa13.14□□□□□ -0.31
RAPGEF3-202ENST00000395358 EBAG9O00559 213 aa13.14□□□□□ -0.31
RAPGEF3-202ENST00000395358 PEX19P40855 299 aa13.14□□□□□ -0.31
RAPGEF3-202ENST00000395358 SMARCC1Q92922 1105 aaPredicted RBP13.14□□□□□ -0.31
RAPGEF3-202ENST00000395358 JPH2Q9BR39 696 aaPredicted RBP13.14□□□□□ -0.31
RAPGEF3-202ENST00000395358 TEX13AQ9BXU3 409 aaPredicted RBP13.14□□□□□ -0.31
RAPGEF3-202ENST00000395358 SNRPA1P09661 255 aaKnown RBP13.14□□□□□ -0.31
RAPGEF3-202ENST00000395358 SEMA3FQ13275 785 aa13.14□□□□□ -0.31
RAPGEF3-202ENST00000395358 MUM1L1Q5H9M0 696 aa13.14□□□□□ -0.31
RAPGEF3-202ENST00000395358 ERC1Q8IUD2 1116 aa13.14□□□□□ -0.31
RAPGEF3-202ENST00000395358 QTRT2Q9H974 415 aaKnown RBP13.14□□□□□ -0.31
RAPGEF3-202ENST00000395358 NALCNQ8IZF0 1738 aa13.14□□□□□ -0.31
RAPGEF3-202ENST00000395358 SFPQP23246 707 aaKnown RBP eCLIP13.13□□□□□ -0.31
RAPGEF3-202ENST00000395358 ST5P78524 1137 aa13.13□□□□□ -0.31
RAPGEF3-202ENST00000395358 NBPF11Q86T75 865 aa13.13□□□□□ -0.31
RAPGEF3-202ENST00000395358 SMARCA5O60264 1052 aaPredicted RBP13.13□□□□□ -0.31
RAPGEF3-202ENST00000395358 SEC31AO94979 1220 aaKnown RBP13.13□□□□□ -0.31
RAPGEF3-202ENST00000395358 NAP1L1P55209 391 aaKnown RBP13.13□□□□□ -0.31
RAPGEF3-202ENST00000395358 GCC1Q96CN9 775 aa13.13□□□□□ -0.31
RAPGEF3-202ENST00000395358 TMX3Q96JJ7 454 aa13.13□□□□□ -0.31
RAPGEF3-202ENST00000395358 THRAP3Q9Y2W1 955 aaKnown RBP13.13□□□□□ -0.31
RAPGEF3-202ENST00000395358 PPP1R12AO14974 1030 aaPredicted RBP13.13□□□□□ -0.31
RAPGEF3-202ENST00000395358 KIF6Q6ZMV9 814 aa13.13□□□□□ -0.31
RAPGEF3-202ENST00000395358 ANKRD18AQ8IVF6 992 aa13.13□□□□□ -0.31
RAPGEF3-202ENST00000395358 DBF4Q9UBU7 674 aaPredicted RBP13.13□□□□□ -0.31
RAPGEF3-202ENST00000395358 MKRN1Q9UHC7 482 aaKnown RBP13.13□□□□□ -0.31
RAPGEF3-202ENST00000395358 CPDO75976 1380 aa13.13□□□□□ -0.31
RAPGEF3-202ENST00000395358 CHL1O00533 1208 aa13.13□□□□□ -0.31
RAPGEF3-202ENST00000395358 ZNF772Q68DY9 489 aaPredicted RBP13.13□□□□□ -0.31
RAPGEF3-202ENST00000395358 ISM2Q6H9L7 571 aa13.13□□□□□ -0.31
RAPGEF3-202ENST00000395358 ZSCAN25Q6NSZ9 544 aa13.13□□□□□ -0.31
RAPGEF3-202ENST00000395358 PRPF38AQ8NAV1 312 aaKnown RBP13.13□□□□□ -0.31
RAPGEF3-202ENST00000395358 IL17REQ8NFR9 667 aa13.13□□□□□ -0.31
RAPGEF3-202ENST00000395358 UPF3BQ9BZI7 483 aaKnown RBP13.13□□□□□ -0.31
RAPGEF3-202ENST00000395358 LCMT1Q9UIC8 334 aa13.13□□□□□ -0.31
RAPGEF3-202ENST00000395358 TAOK2Q9UL54 1235 aa13.13□□□□□ -0.31
RAPGEF3-202ENST00000395358 FRMD3A2A2Y4 597 aa13.12□□□□□ -0.31
RAPGEF3-202ENST00000395358 EVCP57679 992 aa13.12□□□□□ -0.31
RAPGEF3-202ENST00000395358 RNF187Q5TA31 235 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms