RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 HOMER1Q86YM7 354 aa16.78■□□□□ 0.28
CLIP2-203ENST00000395060 GJB4Q9NTQ9 266 aa16.78■□□□□ 0.28
CLIP2-203ENST00000395060 KDRP35968 1356 aa16.78■□□□□ 0.28
CLIP2-203ENST00000395060 POLR3GO15318 223 aaPredicted RBP16.77■□□□□ 0.28
CLIP2-203ENST00000395060 SLIT1O75093 1534 aa16.77■□□□□ 0.28
CLIP2-203ENST00000395060 SLC39A6Q13433 755 aa16.77■□□□□ 0.27
CLIP2-203ENST00000395060 ZRSR1Q15695 479 aaKnown RBP16.77■□□□□ 0.27
CLIP2-203ENST00000395060 KAZALD1Q96I82 304 aa16.77■□□□□ 0.27
CLIP2-203ENST00000395060 EPC1Q9H2F5 836 aa16.77■□□□□ 0.27
CLIP2-203ENST00000395060 TAF5LO75529 589 aa16.76■□□□□ 0.27
CLIP2-203ENST00000395060 RBM6P78332 1123 aaKnown RBP16.76■□□□□ 0.27
CLIP2-203ENST00000395060 STX1AQ16623 288 aa16.76■□□□□ 0.27
CLIP2-203ENST00000395060 ZNF397Q8NF99 534 aaPredicted RBP16.76■□□□□ 0.27
CLIP2-203ENST00000395060 TUBGCP6Q96RT7 1819 aa16.76■□□□□ 0.27
CLIP2-203ENST00000395060 NRKQ7Z2Y5 1582 aa16.76■□□□□ 0.27
CLIP2-203ENST00000395060 CCZ1BP86790 482 aa16.76■□□□□ 0.27
CLIP2-203ENST00000395060 CCZ1P86791 482 aaPredicted RBP16.76■□□□□ 0.27
CLIP2-203ENST00000395060 TERF2Q15554 542 aa16.76■□□□□ 0.27
CLIP2-203ENST00000395060 RIC3Q7Z5B4 369 aa16.76■□□□□ 0.27
CLIP2-203ENST00000395060 CYP21A2P08686 494 aa16.76■□□□□ 0.27
CLIP2-203ENST00000395060 EPHA10Q5JZY3 1008 aa16.76■□□□□ 0.27
CLIP2-203ENST00000395060 GPHNQ9NQX3 736 aaPredicted RBP16.76■□□□□ 0.27
CLIP2-203ENST00000395060 GRM8O00222 908 aa16.75■□□□□ 0.27
CLIP2-203ENST00000395060 HTATSF1O43719 755 aaKnown RBP16.75■□□□□ 0.27
CLIP2-203ENST00000395060 SNW1Q13573 536 aaKnown RBP16.75■□□□□ 0.27
CLIP2-203ENST00000395060 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.75■□□□□ 0.27
CLIP2-203ENST00000395060 DHX40Q8IX18 779 aaKnown RBP16.75■□□□□ 0.27
CLIP2-203ENST00000395060 CCAR2Q8N163 923 aaKnown RBP16.75■□□□□ 0.27
CLIP2-203ENST00000395060 STK11IPQ8N1F8 1099 aa16.75■□□□□ 0.27
CLIP2-203ENST00000395060 IFNKQ9P0W0 207 aa16.75■□□□□ 0.27
CLIP2-203ENST00000395060 DBF4Q9UBU7 674 aaPredicted RBP16.75■□□□□ 0.27
CLIP2-203ENST00000395060 ERC1Q8IUD2 1116 aa16.75■□□□□ 0.27
CLIP2-203ENST00000395060 CFAP45Q9UL16 551 aa16.75■□□□□ 0.27
CLIP2-203ENST00000395060 XRN1Q8IZH2 1706 aaKnown RBP16.75■□□□□ 0.27
CLIP2-203ENST00000395060 PTPDC1A2A3K4 754 aa16.74■□□□□ 0.27
CLIP2-203ENST00000395060 LMOD1P29536 600 aaPredicted RBP16.74■□□□□ 0.27
CLIP2-203ENST00000395060 SF3A1Q15459 793 aaKnown RBP16.74■□□□□ 0.27
CLIP2-203ENST00000395060 COL15A1P39059 1388 aa16.74■□□□□ 0.27
CLIP2-203ENST00000395060 DPCR1Q3MIW9 517 aa16.74■□□□□ 0.27
CLIP2-203ENST00000395060 DDX17Q92841 729 aaKnown RBP16.74■□□□□ 0.27
CLIP2-203ENST00000395060 NEUROD6Q96NK8 337 aa16.74■□□□□ 0.27
CLIP2-203ENST00000395060 ZNF446Q9NWS9 450 aa16.74■□□□□ 0.27
CLIP2-203ENST00000395060 MORC2Q9Y6X9 1032 aaPredicted RBP16.74■□□□□ 0.27
CLIP2-203ENST00000395060 FER1L4A9Z1Z3 1794 aa16.74■□□□□ 0.27
CLIP2-203ENST00000395060 TOPAZ1Q8N9V7 1692 aa16.74■□□□□ 0.27
CLIP2-203ENST00000395060 SLU7O95391 586 aaKnown RBP16.74■□□□□ 0.27
CLIP2-203ENST00000395060 ZC3H6P61129 1189 aaKnown RBP16.74■□□□□ 0.27
CLIP2-203ENST00000395060 ZFP91Q96JP5 570 aaPredicted RBP16.74■□□□□ 0.27
CLIP2-203ENST00000395060 XPO4Q9C0E2 1151 aaKnown RBP16.74■□□□□ 0.27
CLIP2-203ENST00000395060 CDK11BP21127 795 aaKnown RBP16.73■□□□□ 0.27
CLIP2-203ENST00000395060 TFCP2Q12800 502 aa16.73■□□□□ 0.27
CLIP2-203ENST00000395060 STOX1Q6ZVD7 989 aa16.73■□□□□ 0.27
CLIP2-203ENST00000395060 IP6K1Q92551 441 aa16.73■□□□□ 0.27
CLIP2-203ENST00000395060 NPHP4O75161 1426 aaPredicted RBP16.73■□□□□ 0.27
CLIP2-203ENST00000395060 KSR2Q6VAB6 950 aa16.73■□□□□ 0.27
CLIP2-203ENST00000395060 CEP57L1Q8IYX8 460 aa16.73■□□□□ 0.27
CLIP2-203ENST00000395060 KCNB2Q92953 911 aa16.73■□□□□ 0.27
CLIP2-203ENST00000395060 ATP5J2-PTCD1G3V325 749 aa16.72■□□□□ 0.27
CLIP2-203ENST00000395060 PTCD1O75127 700 aaKnown RBP16.72■□□□□ 0.27
CLIP2-203ENST00000395060 RBM43Q6ZSC3 357 aaKnown RBP16.72■□□□□ 0.27
CLIP2-203ENST00000395060 MYD88Q99836 296 aa16.72■□□□□ 0.27
CLIP2-203ENST00000395060 DBNDD2Q9BQY9 259 aa16.72■□□□□ 0.27
CLIP2-203ENST00000395060 DBNLQ9UJU6 430 aaKnown RBP16.72■□□□□ 0.27
CLIP2-203ENST00000395060 USP42Q9H9J4 1324 aaKnown RBP16.72■□□□□ 0.27
CLIP2-203ENST00000395060 HAND2P61296 217 aa16.72■□□□□ 0.27
CLIP2-203ENST00000395060 ARHGAP29Q52LW3 1261 aa16.72■□□□□ 0.27
CLIP2-203ENST00000395060 NYAP1Q6ZVC0 841 aa16.72■□□□□ 0.27
CLIP2-203ENST00000395060 DNAI1Q9UI46 699 aa16.72■□□□□ 0.27
CLIP2-203ENST00000395060 PIK3C2AO00443 1686 aa16.72■□□□□ 0.27
CLIP2-203ENST00000395060 HIP1O00291 1037 aa16.72■□□□□ 0.27
CLIP2-203ENST00000395060 HSP90AB3PQ58FF7 597 aa16.72■□□□□ 0.27
CLIP2-203ENST00000395060 SEC31AO94979 1220 aaKnown RBP16.71■□□□□ 0.27
CLIP2-203ENST00000395060 GCP02774 474 aa16.71■□□□□ 0.27
CLIP2-203ENST00000395060 GABPB1Q06547 395 aaPredicted RBP16.71■□□□□ 0.27
CLIP2-203ENST00000395060 ANO10Q9NW15 660 aa16.71■□□□□ 0.27
CLIP2-203ENST00000395060 GTF2E1P29083 439 aaPredicted RBP16.71■□□□□ 0.27
CLIP2-203ENST00000395060 NDUFA8P51970 172 aa16.71■□□□□ 0.27
CLIP2-203ENST00000395060 E4F1Q66K89 784 aaPredicted RBP16.71■□□□□ 0.27
CLIP2-203ENST00000395060 PROSER2Q86WR7 435 aaPredicted RBP16.71■□□□□ 0.27
CLIP2-203ENST00000395060 CTDNEP1O95476 244 aa16.7■□□□□ 0.26
CLIP2-203ENST00000395060 ADD1P35611 737 aaKnown RBP16.7■□□□□ 0.26
CLIP2-203ENST00000395060 NSUN7Q8NE18 718 aaKnown RBP16.7■□□□□ 0.26
CLIP2-203ENST00000395060 ERO1AQ96HE7 468 aa16.7■□□□□ 0.26
CLIP2-203ENST00000395060 MRFAP1L1Q96HT8 127 aa16.7■□□□□ 0.26
CLIP2-203ENST00000395060 ERBB3P21860 1342 aa16.7■□□□□ 0.26
CLIP2-203ENST00000395060 GOLIM4O00461 696 aa16.7■□□□□ 0.26
CLIP2-203ENST00000395060 ATP1A3P13637 1013 aa16.7■□□□□ 0.26
CLIP2-203ENST00000395060 TTLL5Q6EMB2 1281 aa16.7■□□□□ 0.26
CLIP2-203ENST00000395060 NBPF11Q86T75 865 aa16.7■□□□□ 0.26
CLIP2-203ENST00000395060 C1orf141Q5JVX7 400 aa16.7■□□□□ 0.26
CLIP2-203ENST00000395060 ARMCX5Q6P1M9 558 aa16.7■□□□□ 0.26
CLIP2-203ENST00000395060 PPP1R13BQ96KQ4 1090 aa16.7■□□□□ 0.26
CLIP2-203ENST00000395060 PCDHA7Q9UN72 937 aa16.7■□□□□ 0.26
CLIP2-203ENST00000395060 FAM208AQ9UK61 1670 aaKnown RBP16.69■□□□□ 0.26
CLIP2-203ENST00000395060 URI1O94763 535 aaPredicted RBP16.69■□□□□ 0.26
CLIP2-203ENST00000395060 SFPQP23246 707 aaKnown RBP eCLIP16.69■□□□□ 0.26
CLIP2-203ENST00000395060 ZCCHC17Q9NP64 241 aaKnown RBP16.69■□□□□ 0.26
CLIP2-203ENST00000395060 CLIC4Q9Y696 253 aa16.69■□□□□ 0.26
CLIP2-203ENST00000395060 GIGYF1O75420 1035 aaPredicted RBP16.69■□□□□ 0.26
CLIP2-203ENST00000395060 IGKV5-2P06315 115 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms