RNA–Protein interactions for RNA: ENST00000395019.3

CTF1-202, Transcript of cardiotrophin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTF1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-202ENST00000395019 SLC10A5Q5PT55 438 aa29.99■■■□□ 2.39
CTF1-202ENST00000395019 CASC1Q6TDU7 716 aa29.99■■■□□ 2.39
CTF1-202ENST00000395019 CCDC8Q9H0W5 538 aaPredicted RBP29.99■■■□□ 2.39
CTF1-202ENST00000395019 GPR108Q9NPR9 543 aa29.99■■■□□ 2.39
CTF1-202ENST00000395019 COL4A1P02462 1669 aa29.99■■■□□ 2.39
CTF1-202ENST00000395019 ST5P78524 1137 aa29.98■■■□□ 2.39
CTF1-202ENST00000395019 GREM2Q9H772 168 aa29.98■■■□□ 2.39
CTF1-202ENST00000395019 TRIM6-TRIM34B2RNG4 842 aa29.97■■■□□ 2.39
CTF1-202ENST00000395019 LRRC24Q50LG9 513 aa29.97■■■□□ 2.39
CTF1-202ENST00000395019 IPO9Q96P70 1041 aaKnown RBP29.97■■■□□ 2.39
CTF1-202ENST00000395019 CCDC85AQ96PX6 553 aaPredicted RBP29.97■■■□□ 2.39
CTF1-202ENST00000395019 GOLGB1Q14789 3259 aaKnown RBP29.97■■■□□ 2.39
CTF1-202ENST00000395019 ANKRD18BA2A2Z9 1011 aa29.96■■■□□ 2.39
CTF1-202ENST00000395019 ITGA6P23229 1130 aa29.96■■■□□ 2.39
CTF1-202ENST00000395019 RIC1Q4ADV7 1423 aa29.96■■■□□ 2.39
CTF1-202ENST00000395019 TAF7LQ5H9L4 462 aa29.96■■■□□ 2.39
CTF1-202ENST00000395019 RILPL2Q969X0 211 aa29.95■■■□□ 2.38
CTF1-202ENST00000395019 PUS3Q9BZE2 481 aaKnown RBP29.95■■■□□ 2.38
CTF1-202ENST00000395019 C22orf23Q9BZE7 217 aa29.95■■■□□ 2.38
CTF1-202ENST00000395019 TLR7Q9NYK1 1049 aaKnown RBP29.95■■■□□ 2.38
CTF1-202ENST00000395019 CACNA1SQ13698 1873 aa29.95■■■□□ 2.38
CTF1-202ENST00000395019 SPEF2Q9C093 1822 aa29.95■■■□□ 2.38
CTF1-202ENST00000395019 DDRGK1Q96HY6 314 aa29.93■■■□□ 2.38
CTF1-202ENST00000395019 CNTROBQ8N137 903 aa29.93■■■□□ 2.38
CTF1-202ENST00000395019 DBNLQ9UJU6 430 aaKnown RBP29.93■■■□□ 2.38
CTF1-202ENST00000395019 DLEC1Q9Y238 1755 aa29.92■■■□□ 2.38
CTF1-202ENST00000395019 BRIP1Q9BX63 1249 aa29.92■■■□□ 2.38
CTF1-202ENST00000395019 CEP126Q9P2H0 1117 aa29.92■■■□□ 2.38
CTF1-202ENST00000395019 RTL9Q8NET4 1388 aa29.91■■■□□ 2.38
CTF1-202ENST00000395019 NLRP3Q96P20 1036 aa29.9■■■□□ 2.38
CTF1-202ENST00000395019 CHMLP26374 656 aa29.89■■■□□ 2.38
CTF1-202ENST00000395019 RIPOR2Q9Y4F9 1068 aa29.89■■■□□ 2.38
CTF1-202ENST00000395019 KLRG2A4D1S0 409 aaPredicted RBP29.89■■■□□ 2.37
CTF1-202ENST00000395019 RBM25P49756 843 aaKnown RBP29.89■■■□□ 2.37
CTF1-202ENST00000395019 CCDC152Q4G0S7 254 aa29.89■■■□□ 2.37
CTF1-202ENST00000395019 LDHAL6AQ6ZMR3 332 aa29.89■■■□□ 2.37
CTF1-202ENST00000395019 ZNF609O15014 1411 aa29.89■■■□□ 2.37
CTF1-202ENST00000395019 MAP4K4O95819 1239 aaPredicted RBP29.88■■■□□ 2.37
CTF1-202ENST00000395019 DBNDD2Q9BQY9 259 aa29.88■■■□□ 2.37
CTF1-202ENST00000395019 PPP1R1BQ9UD71 204 aaPredicted RBP29.88■■■□□ 2.37
CTF1-202ENST00000395019 LRP5O75197 1615 aa29.88■■■□□ 2.37
CTF1-202ENST00000395019 ATP5JP18859 108 aa29.87■■■□□ 2.37
CTF1-202ENST00000395019 CHRNA5P30532 468 aa29.87■■■□□ 2.37
CTF1-202ENST00000395019 SF3B3Q15393 1217 aaKnown RBP29.87■■■□□ 2.37
CTF1-202ENST00000395019 CRY2Q49AN0 593 aa29.87■■■□□ 2.37
CTF1-202ENST00000395019 KLHL34Q8N239 644 aa29.87■■■□□ 2.37
CTF1-202ENST00000395019 SEC31BQ9NQW1 1179 aa29.87■■■□□ 2.37
CTF1-202ENST00000395019 AKAP2Q9Y2D5 859 aa29.87■■■□□ 2.37
CTF1-202ENST00000395019 BRCA1P38398 1863 aaKnown RBP29.86■■■□□ 2.37
CTF1-202ENST00000395019 EVI5LQ96CN4 794 aa29.85■■■□□ 2.37
CTF1-202ENST00000395019 CNNM1Q9NRU3 951 aa29.85■■■□□ 2.37
CTF1-202ENST00000395019 PDE6BP35913 854 aa29.85■■■□□ 2.37
CTF1-202ENST00000395019 ESYT1Q9BSJ8 1104 aa29.85■■■□□ 2.37
CTF1-202ENST00000395019 AK9Q5TCS8 1911 aa29.85■■■□□ 2.37
CTF1-202ENST00000395019 A0A1B0GUL7 405 aa29.84■■■□□ 2.37
CTF1-202ENST00000395019 REC8O95072 547 aa29.84■■■□□ 2.37
CTF1-202ENST00000395019 C2CD5Q86YS7 1000 aa29.84■■■□□ 2.37
CTF1-202ENST00000395019 NEUROD6Q96NK8 337 aa29.84■■■□□ 2.37
CTF1-202ENST00000395019 BOLA2Q9H3K6 86 aa29.84■■■□□ 2.37
CTF1-202ENST00000395019 SRGNP10124 158 aa29.83■■■□□ 2.37
CTF1-202ENST00000395019 TIMM10P62072 90 aa29.83■■■□□ 2.37
CTF1-202ENST00000395019 METTL24Q5JXM2 366 aa29.82■■■□□ 2.36
CTF1-202ENST00000395019 SLC51AQ86UW1 340 aa29.82■■■□□ 2.36
CTF1-202ENST00000395019 A0A0G2JLW4 131 aa29.82■■■□□ 2.36
CTF1-202ENST00000395019 SLX4Q8IY92 1834 aa29.81■■■□□ 2.36
CTF1-202ENST00000395019 NLGN2Q8NFZ4 835 aa29.81■■■□□ 2.36
CTF1-202ENST00000395019 USP26Q9BXU7 913 aa29.81■■■□□ 2.36
CTF1-202ENST00000395019 DPEP1P16444 411 aa29.8■■■□□ 2.36
CTF1-202ENST00000395019 KCNA3P22001 575 aa29.8■■■□□ 2.36
CTF1-202ENST00000395019 VGLL2Q8N8G2 317 aa29.8■■■□□ 2.36
CTF1-202ENST00000395019 FHDC1Q9C0D6 1143 aaPredicted RBP29.8■■■□□ 2.36
CTF1-202ENST00000395019 CD2APQ9Y5K6 639 aa29.8■■■□□ 2.36
CTF1-202ENST00000395019 MROH5Q6ZUA9 1318 aa29.79■■■□□ 2.36
CTF1-202ENST00000395019 RPGRQ92834 1020 aaKnown RBP29.79■■■□□ 2.36
CTF1-202ENST00000395019 CELF1Q92879 486 aaKnown RBP29.79■■■□□ 2.36
CTF1-202ENST00000395019 HAUS7Q99871 368 aa29.78■■■□□ 2.36
CTF1-202ENST00000395019 H0YIN7 160 aa29.78■■■□□ 2.36
CTF1-202ENST00000395019 IGHMBP2P38935 993 aaKnown RBP29.78■■■□□ 2.36
CTF1-202ENST00000395019 MPHOSPH8Q99549 860 aa29.78■■■□□ 2.36
CTF1-202ENST00000395019 A0A1B0GUL6 1792 aa29.77■■■□□ 2.36
CTF1-202ENST00000395019 PDE8BO95263 885 aa29.77■■■□□ 2.36
CTF1-202ENST00000395019 HOXA10P31260 410 aaPredicted RBP29.77■■■□□ 2.36
CTF1-202ENST00000395019 ATP2B3Q16720 1220 aa29.77■■■□□ 2.36
CTF1-202ENST00000395019 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.77■■■□□ 2.36
CTF1-202ENST00000395019 CDC5LQ99459 802 aaKnown RBP29.77■■■□□ 2.36
CTF1-202ENST00000395019 WWC3Q9ULE0 1092 aa29.77■■■□□ 2.36
CTF1-202ENST00000395019 NPR1P16066 1061 aa29.76■■■□□ 2.35
CTF1-202ENST00000395019 DDX46Q7L014 1031 aaKnown RBP29.76■■■□□ 2.35
CTF1-202ENST00000395019 ZNF622Q969S3 477 aaKnown RBP eCLIP29.76■■■□□ 2.35
CTF1-202ENST00000395019 XAGE2Q96GT9 111 aa29.76■■■□□ 2.35
CTF1-202ENST00000395019 MASTLQ96GX5 879 aa29.76■■■□□ 2.35
CTF1-202ENST00000395019 HIP1O00291 1037 aa29.75■■■□□ 2.35
CTF1-202ENST00000395019 TGFB2P61812 414 aa29.75■■■□□ 2.35
CTF1-202ENST00000395019 RBM17Q96I25 401 aaKnown RBP29.75■■■□□ 2.35
CTF1-202ENST00000395019 DIAPH3Q9NSV4 1193 aa29.74■■■□□ 2.35
CTF1-202ENST00000395019 EPB41L2O43491 1005 aaKnown RBP29.74■■■□□ 2.35
CTF1-202ENST00000395019 SGSM2O43147 1006 aa29.73■■■□□ 2.35
CTF1-202ENST00000395019 ADORA1P30542 326 aa29.73■■■□□ 2.35
CTF1-202ENST00000395019 GRAPQ13588 217 aa29.73■■■□□ 2.35
CTF1-202ENST00000395019 CCDC158Q5M9N0 1113 aa29.73■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms