RNA–Protein interactions for RNA: ENST00000393958.6

PC-202, Transcript of pyruvate carboxylase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PC, Length 4,005 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PC-202ENST00000393958 NECTIN1Q15223 517 aa11.84□□□□□ -0.51
PC-202ENST00000393958 SF3A1Q15459 793 aaKnown RBP11.84□□□□□ -0.51
PC-202ENST00000393958 CCDC144BQ3MJ40 725 aa11.84□□□□□ -0.51
PC-202ENST00000393958 CCDC144CPQ8IYA2 1237 aa11.84□□□□□ -0.51
PC-202ENST00000393958 FAM177A1Q8N128 213 aaPredicted RBP11.83□□□□□ -0.51
PC-202ENST00000393958 USP27XA6NNY8 438 aa11.83□□□□□ -0.52
PC-202ENST00000393958 POLR3DP05423 398 aaPredicted RBP11.83□□□□□ -0.52
PC-202ENST00000393958 TMEM87AQ8NBN3 555 aa11.83□□□□□ -0.52
PC-202ENST00000393958 PGBD1Q96JS3 809 aa11.83□□□□□ -0.52
PC-202ENST00000393958 FUCA2Q9BTY2 467 aa11.83□□□□□ -0.52
PC-202ENST00000393958 SCAND2PQ9GZW5 306 aaPredicted RBP11.83□□□□□ -0.52
PC-202ENST00000393958 TMX1Q9H3N1 280 aa11.83□□□□□ -0.52
PC-202ENST00000393958 ZSCAN20P17040 1043 aaPredicted RBP11.83□□□□□ -0.52
PC-202ENST00000393958 HSP90AA4PQ58FG1 418 aa11.83□□□□□ -0.52
PC-202ENST00000393958 ZSCAN25Q6NSZ9 544 aa11.83□□□□□ -0.52
PC-202ENST00000393958 GRM8O00222 908 aa11.83□□□□□ -0.52
PC-202ENST00000393958 SMC2O95347 1197 aa11.83□□□□□ -0.52
PC-202ENST00000393958 APOBRQ0VD83 1088 aa11.83□□□□□ -0.52
PC-202ENST00000393958 HSP90AB3PQ58FF7 597 aa11.83□□□□□ -0.52
PC-202ENST00000393958 CCAR1Q8IX12 1150 aaKnown RBP11.83□□□□□ -0.52
PC-202ENST00000393958 YY1P25490 414 aa11.82□□□□□ -0.52
PC-202ENST00000393958 ZNF75DP51815 510 aa11.82□□□□□ -0.52
PC-202ENST00000393958 HAND2P61296 217 aa11.82□□□□□ -0.52
PC-202ENST00000393958 TRERF1Q96PN7 1200 aa11.82□□□□□ -0.52
PC-202ENST00000393958 ATF5Q9Y2D1 282 aaPredicted RBP11.82□□□□□ -0.52
PC-202ENST00000393958 EXOC5O00471 708 aa11.82□□□□□ -0.52
PC-202ENST00000393958 DDB1Q16531 1140 aa11.82□□□□□ -0.52
PC-202ENST00000393958 CCDC73Q6ZRK6 1079 aa11.82□□□□□ -0.52
PC-202ENST00000393958 C11orf57Q6ZUT1 292 aaPredicted RBP11.82□□□□□ -0.52
PC-202ENST00000393958 UBE3BQ7Z3V4 1068 aa11.82□□□□□ -0.52
PC-202ENST00000393958 NEK1Q96PY6 1258 aa11.82□□□□□ -0.52
PC-202ENST00000393958 RPS6KB1P23443 525 aa11.82□□□□□ -0.52
PC-202ENST00000393958 NEXNQ0ZGT2 675 aa11.82□□□□□ -0.52
PC-202ENST00000393958 CGNQ9P2M7 1197 aaKnown RBP11.82□□□□□ -0.52
PC-202ENST00000393958 KINO60870 393 aaKnown RBP11.81□□□□□ -0.52
PC-202ENST00000393958 SKILP12757 684 aa11.81□□□□□ -0.52
PC-202ENST00000393958 ACSBG1Q96GR2 724 aa11.81□□□□□ -0.52
PC-202ENST00000393958 SNRKQ9NRH2 765 aa11.81□□□□□ -0.52
PC-202ENST00000393958 TTC41PQ6P2S7 1318 aa11.81□□□□□ -0.52
PC-202ENST00000393958 NRKQ7Z2Y5 1582 aa11.81□□□□□ -0.52
PC-202ENST00000393958 A0A0G2JLW4 131 aa11.81□□□□□ -0.52
PC-202ENST00000393958 MAP4K1Q92918 833 aa11.81□□□□□ -0.52
PC-202ENST00000393958 STK32BQ9NY57 414 aa11.81□□□□□ -0.52
PC-202ENST00000393958 GOLGB1Q14789 3259 aaKnown RBP11.81□□□□□ -0.52
PC-202ENST00000393958 UBR1Q8IWV7 1749 aa11.81□□□□□ -0.52
PC-202ENST00000393958 TFCP2Q12800 502 aa11.81□□□□□ -0.52
PC-202ENST00000393958 TOB2Q14106 344 aaPredicted RBP11.81□□□□□ -0.52
PC-202ENST00000393958 EPHA10Q5JZY3 1008 aa11.81□□□□□ -0.52
PC-202ENST00000393958 CEP135Q66GS9 1140 aa11.81□□□□□ -0.52
PC-202ENST00000393958 KSR2Q6VAB6 950 aa11.81□□□□□ -0.52
PC-202ENST00000393958 COPS6Q7L5N1 327 aa11.81□□□□□ -0.52
PC-202ENST00000393958 ERC1Q8IUD2 1116 aa11.81□□□□□ -0.52
PC-202ENST00000393958 SPTLC3Q9NUV7 552 aa11.81□□□□□ -0.52
PC-202ENST00000393958 ADCY9O60503 1353 aa11.81□□□□□ -0.52
PC-202ENST00000393958 GOLIM4O00461 696 aa11.8□□□□□ -0.52
PC-202ENST00000393958 AOPEPQ8N6M6 819 aa11.8□□□□□ -0.52
PC-202ENST00000393958 GJB4Q9NTQ9 266 aa11.8□□□□□ -0.52
PC-202ENST00000393958 RGPD1P0DJD0 1748 aa11.8□□□□□ -0.52
PC-202ENST00000393958 AOX1Q06278 1338 aa11.8□□□□□ -0.52
PC-202ENST00000393958 A0A1B0GVL5 298 aa11.8□□□□□ -0.52
PC-202ENST00000393958 PLEKHO1Q53GL0 409 aaPredicted RBP11.8□□□□□ -0.52
PC-202ENST00000393958 FSIP1Q8NA03 581 aa11.8□□□□□ -0.52
PC-202ENST00000393958 XAGE3Q8WTP9 111 aa11.8□□□□□ -0.52
PC-202ENST00000393958 IP6K1Q92551 441 aa11.8□□□□□ -0.52
PC-202ENST00000393958 KAZALD1Q96I82 304 aa11.8□□□□□ -0.52
PC-202ENST00000393958 DBNDD2Q9BQY9 259 aa11.8□□□□□ -0.52
PC-202ENST00000393958 HTATSF1O43719 755 aaKnown RBP11.8□□□□□ -0.52
PC-202ENST00000393958 NCBP1Q09161 790 aaKnown RBP11.8□□□□□ -0.52
PC-202ENST00000393958 PTPN14Q15678 1187 aa11.8□□□□□ -0.52
PC-202ENST00000393958 HOMER1Q86YM7 354 aa11.8□□□□□ -0.52
PC-202ENST00000393958 DDX58O95786 925 aaKnown RBP11.79□□□□□ -0.52
PC-202ENST00000393958 TPM3P06753 285 aa11.79□□□□□ -0.52
PC-202ENST00000393958 DDX19AQ9NUU7 478 aaKnown RBP11.79□□□□□ -0.52
PC-202ENST00000393958 TIMM10P62072 90 aa11.79□□□□□ -0.52
PC-202ENST00000393958 DMTNQ08495 405 aa11.79□□□□□ -0.52
PC-202ENST00000393958 GNL2Q13823 731 aaKnown RBP11.79□□□□□ -0.52
PC-202ENST00000393958 ANKRD1Q15327 319 aa11.79□□□□□ -0.52
PC-202ENST00000393958 GPHNQ9NQX3 736 aaPredicted RBP11.79□□□□□ -0.52
PC-202ENST00000393958 GCP02774 474 aa11.79□□□□□ -0.52
PC-202ENST00000393958 CLSTN2Q9H4D0 955 aa11.79□□□□□ -0.52
PC-202ENST00000393958 RGS17Q9UGC6 210 aaPredicted RBP11.79□□□□□ -0.52
PC-202ENST00000393958 ZNF215Q9UL58 517 aaPredicted RBP11.79□□□□□ -0.52
PC-202ENST00000393958 CCDC69A6NI79 296 aa11.78□□□□□ -0.52
PC-202ENST00000393958 GIGYF1O75420 1035 aaPredicted RBP11.78□□□□□ -0.52
PC-202ENST00000393958 POLD1P28340 1107 aa11.78□□□□□ -0.52
PC-202ENST00000393958 FKBP4Q02790 459 aaKnown RBP eCLIP11.78□□□□□ -0.523e-6■■■■□ 20.3
PC-202ENST00000393958 ZNF526Q8TF50 670 aaPredicted RBP11.78□□□□□ -0.52
PC-202ENST00000393958 PIK3C2AO00443 1686 aa11.78□□□□□ -0.52
PC-202ENST00000393958 CCDC125Q86Z20 511 aa11.78□□□□□ -0.52
PC-202ENST00000393958 USP28Q96RU2 1077 aa11.78□□□□□ -0.52
PC-202ENST00000393958 FAM196AQ6ZSG2 479 aa11.78□□□□□ -0.52
PC-202ENST00000393958 REREQ9P2R6 1566 aa11.78□□□□□ -0.52
PC-202ENST00000393958 SCRN1Q12765 414 aa11.77□□□□□ -0.52
PC-202ENST00000393958 ELF2Q15723 593 aa11.77□□□□□ -0.52
PC-202ENST00000393958 WASHC4Q2M389 1173 aa11.77□□□□□ -0.52
PC-202ENST00000393958 TTLL5Q6EMB2 1281 aa11.77□□□□□ -0.52
PC-202ENST00000393958 CCAR2Q8N163 923 aaKnown RBP11.77□□□□□ -0.52
PC-202ENST00000393958 NFATC2IPQ8NCF5 419 aa11.77□□□□□ -0.52
PC-202ENST00000393958 SPON1Q9HCB6 807 aa11.77□□□□□ -0.52
PC-202ENST00000393958 TAF5LO75529 589 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms