RNA–Protein interactions for RNA: ENST00000393743.7

DDX60-201, Transcript of DExD/H-box helicase 60, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX60, Length 6,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60-201ENST00000393743 COPS6Q7L5N1 327 aa8.23□□□□□ -1.09
DDX60-201ENST00000393743 TFCP2L1Q9NZI6 479 aa8.23□□□□□ -1.09
DDX60-201ENST00000393743 ASXL1Q8IXJ9 1541 aa8.22□□□□□ -1.09
DDX60-201ENST00000393743 PRC1O43663 620 aa8.22□□□□□ -1.09
DDX60-201ENST00000393743 CASQ1P31415 396 aa8.22□□□□□ -1.09
DDX60-201ENST00000393743 C8orf37Q96NL8 207 aa8.22□□□□□ -1.09
DDX60-201ENST00000393743 SLC26A6Q9BXS9 759 aa8.22□□□□□ -1.09
DDX60-201ENST00000393743 NUP153P49790 1475 aaKnown RBP8.22□□□□□ -1.09
DDX60-201ENST00000393743 NPATQ14207 1427 aa8.22□□□□□ -1.09
DDX60-201ENST00000393743 SPDYE3A6NKU9 549 aa8.22□□□□□ -1.09
DDX60-201ENST00000393743 SMARCA5O60264 1052 aaPredicted RBP8.22□□□□□ -1.09
DDX60-201ENST00000393743 CKAP2LQ8IYA6 745 aa8.22□□□□□ -1.09
DDX60-201ENST00000393743 ZNF710Q8N1W2 664 aa8.22□□□□□ -1.09
DDX60-201ENST00000393743 DENND2AQ9ULE3 1009 aa8.22□□□□□ -1.09
DDX60-201ENST00000393743 POLR3AO14802 1390 aaPredicted RBP8.22□□□□□ -1.09
DDX60-201ENST00000393743 MAGEB6P1A0A0J9YX57 407 aa8.22□□□□□ -1.09
DDX60-201ENST00000393743 PRKCSHP14314 528 aaPredicted RBP8.22□□□□□ -1.09
DDX60-201ENST00000393743 RRP36Q96EU6 259 aaKnown RBP8.22□□□□□ -1.09
DDX60-201ENST00000393743 IFFO1Q0D2I5 559 aa8.22□□□□□ -1.09
DDX60-201ENST00000393743 MICU3Q86XE3 530 aa8.22□□□□□ -1.09
DDX60-201ENST00000393743 HOMER2Q9NSB8 354 aa8.22□□□□□ -1.09
DDX60-201ENST00000393743 ARHGEF10O15013 1369 aa8.22□□□□□ -1.09
DDX60-201ENST00000393743 MAP3K5Q99683 1374 aa8.22□□□□□ -1.09
DDX60-201ENST00000393743 LMTK3Q96Q04 1460 aa8.21□□□□□ -1.09
DDX60-201ENST00000393743 SHTN1A0MZ66 631 aa8.21□□□□□ -1.09
DDX60-201ENST00000393743 FSD2A1L4K1 749 aa8.21□□□□□ -1.09
DDX60-201ENST00000393743 TUBB4BP68371 445 aa8.21□□□□□ -1.09
DDX60-201ENST00000393743 MAP2K1Q02750 393 aaPredicted RBP8.21□□□□□ -1.09
DDX60-201ENST00000393743 TRAPPC3LQ5T215 181 aa8.21□□□□□ -1.09
DDX60-201ENST00000393743 ANKRD44Q8N8A2 993 aa8.21□□□□□ -1.09
DDX60-201ENST00000393743 PPM1EQ8WY54 764 aa8.21□□□□□ -1.09
DDX60-201ENST00000393743 SIRT1Q96EB6 747 aa8.21□□□□□ -1.09
DDX60-201ENST00000393743 FAM107BQ9H098 131 aa8.21□□□□□ -1.09
DDX60-201ENST00000393743 RBM28Q9NW13 759 aaKnown RBP8.21□□□□□ -1.09
DDX60-201ENST00000393743 UHRF1BP1Q6BDS2 1440 aa8.21□□□□□ -1.09
DDX60-201ENST00000393743 PSMA7O14818 248 aa8.21□□□□□ -1.09
DDX60-201ENST00000393743 IBSPP21815 317 aaPredicted RBP8.21□□□□□ -1.09
DDX60-201ENST00000393743 UBE2HP62256 183 aa8.21□□□□□ -1.1
DDX60-201ENST00000393743 FAM177A1Q8N128 213 aaPredicted RBP8.21□□□□□ -1.1
DDX60-201ENST00000393743 FLAD1Q8NFF5 587 aa8.21□□□□□ -1.1
DDX60-201ENST00000393743 IP6K1Q92551 441 aa8.21□□□□□ -1.1
DDX60-201ENST00000393743 ATL3Q6DD88 541 aa8.21□□□□□ -1.1
DDX60-201ENST00000393743 LMBR1LQ6UX01 489 aa8.21□□□□□ -1.1
DDX60-201ENST00000393743 MICALCLQ6ZW33 695 aa8.21□□□□□ -1.1
DDX60-201ENST00000393743 ZSCAN30Q86W11 494 aa8.21□□□□□ -1.1
DDX60-201ENST00000393743 LMBR1Q8WVP7 490 aa8.21□□□□□ -1.1
DDX60-201ENST00000393743 CCDC102AQ96A19 550 aa8.21□□□□□ -1.1
DDX60-201ENST00000393743 COMMD10Q9Y6G5 202 aa8.21□□□□□ -1.1
DDX60-201ENST00000393743 KLF18A0A0U1RQI7 1052 aa8.21□□□□□ -1.1
DDX60-201ENST00000393743 MYCNP04198 464 aaPredicted RBP8.21□□□□□ -1.1
DDX60-201ENST00000393743 LDHBP07195 334 aaKnown RBP8.21□□□□□ -1.1
DDX60-201ENST00000393743 CYLC1P35663 651 aaPredicted RBP8.21□□□□□ -1.1
DDX60-201ENST00000393743 KRT79Q5XKE5 535 aa8.21□□□□□ -1.1
DDX60-201ENST00000393743 CTNNBL1Q8WYA6 563 aaPredicted RBP8.21□□□□□ -1.1
DDX60-201ENST00000393743 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.21□□□□□ -1.1
DDX60-201ENST00000393743 VAT1LQ9HCJ6 419 aa8.21□□□□□ -1.1
DDX60-201ENST00000393743 KCNG1Q9UIX4 513 aa8.21□□□□□ -1.1
DDX60-201ENST00000393743 ATP10BO94823 1461 aa8.21□□□□□ -1.1
DDX60-201ENST00000393743 FERP16591 822 aa8.2□□□□□ -1.1
DDX60-201ENST00000393743 GJB2P29033 226 aa8.2□□□□□ -1.1
DDX60-201ENST00000393743 MAP3K9P80192 1104 aa8.2□□□□□ -1.1
DDX60-201ENST00000393743 HS2ST1Q7LGA3 356 aa8.2□□□□□ -1.1
DDX60-201ENST00000393743 PHACTR2O75167 634 aa8.2□□□□□ -1.1
DDX60-201ENST00000393743 CKAP4Q07065 602 aaKnown RBP8.2□□□□□ -1.1
DDX60-201ENST00000393743 TRIM47Q96LD4 638 aa8.2□□□□□ -1.1
DDX60-201ENST00000393743 SPAG5Q96R06 1193 aa8.2□□□□□ -1.1
DDX60-201ENST00000393743 CHPF2Q9P2E5 772 aa8.2□□□□□ -1.1
DDX60-201ENST00000393743 EIF4G3O43432 1585 aaKnown RBP8.2□□□□□ -1.1
DDX60-201ENST00000393743 BICDL2A1A5D9 508 aa8.2□□□□□ -1.1
DDX60-201ENST00000393743 PPM1FP49593 454 aaPredicted RBP8.2□□□□□ -1.1
DDX60-201ENST00000393743 NAPAP54920 295 aa8.2□□□□□ -1.1
DDX60-201ENST00000393743 CCDC82Q8N4S0 544 aa8.2□□□□□ -1.1
DDX60-201ENST00000393743 SNRKQ9NRH2 765 aa8.2□□□□□ -1.1
DDX60-201ENST00000393743 PNMA2Q9UL42 364 aa8.2□□□□□ -1.1
DDX60-201ENST00000393743 CCDC117Q8IWD4 279 aaPredicted RBP8.2□□□□□ -1.1
DDX60-201ENST00000393743 KIAA1524Q8TCG1 905 aa8.2□□□□□ -1.1
DDX60-201ENST00000393743 CLIP2Q9UDT6 1046 aa8.2□□□□□ -1.1
DDX60-201ENST00000393743 IRS4O14654 1257 aaPredicted RBP8.2□□□□□ -1.1
DDX60-201ENST00000393743 KCNA6P17658 529 aa8.2□□□□□ -1.1
DDX60-201ENST00000393743 STAT6P42226 847 aa8.2□□□□□ -1.1
DDX60-201ENST00000393743 CCT2P78371 535 aaKnown RBP8.2□□□□□ -1.1
DDX60-201ENST00000393743 SYNCQ9H7C4 482 aa8.2□□□□□ -1.1
DDX60-201ENST00000393743 ARHGEF12Q9NZN5 1544 aa8.19□□□□□ -1.1
DDX60-201ENST00000393743 TRIM75PA6NK02 468 aa8.19□□□□□ -1.1
DDX60-201ENST00000393743 RNF113AO15541 343 aaKnown RBP8.19□□□□□ -1.1
DDX60-201ENST00000393743 GCP02774 474 aa8.19□□□□□ -1.1
DDX60-201ENST00000393743 SLC9C2Q5TAH2 1124 aa8.19□□□□□ -1.1
DDX60-201ENST00000393743 ALG1Q9BT22 464 aa8.19□□□□□ -1.1
DDX60-201ENST00000393743 IKBKGQ9Y6K9 419 aa8.19□□□□□ -1.1
DDX60-201ENST00000393743 SYKP43405 635 aa8.19□□□□□ -1.1
DDX60-201ENST00000393743 PPP2R5BQ15173 497 aa8.19□□□□□ -1.1
DDX60-201ENST00000393743 LRSAM1Q6UWE0 723 aa8.19□□□□□ -1.1
DDX60-201ENST00000393743 YTHDC2Q9H6S0 1430 aaKnown RBP8.19□□□□□ -1.1
DDX60-201ENST00000393743 SYCE3A1L190 88 aa8.19□□□□□ -1.1
DDX60-201ENST00000393743 VTI1AQ96AJ9 217 aa8.19□□□□□ -1.1
DDX60-201ENST00000393743 PAG1Q9NWQ8 432 aa8.19□□□□□ -1.1
DDX60-201ENST00000393743 CEP83Q9Y592 693 aa8.19□□□□□ -1.1
DDX60-201ENST00000393743 LIG1P18858 919 aa8.19□□□□□ -1.1
DDX60-201ENST00000393743 CNBD1Q8NA66 436 aa8.19□□□□□ -1.1
DDX60-201ENST00000393743 SNX16P57768 344 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms