RNA–Protein interactions for RNA: ENST00000393324.7

ME3-202, Transcript of malic enzyme 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ME3, Length 2,240 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-202ENST00000393324 ZNF589Q86UQ0 364 aaPredicted RBP24.39■■□□□ 1.5
ME3-202ENST00000393324 RBM8AQ9Y5S9 174 aaKnown RBP24.39■■□□□ 1.5
ME3-202ENST00000393324 KCNJ4P48050 445 aa24.39■■□□□ 1.49
ME3-202ENST00000393324 TTC39AQ5SRH9 613 aa24.39■■□□□ 1.49
ME3-202ENST00000393324 SMIM5Q71RC9 77 aa24.38■■□□□ 1.49
ME3-202ENST00000393324 TMX3Q96JJ7 454 aa24.38■■□□□ 1.49
ME3-202ENST00000393324 QTRT2Q9H974 415 aaKnown RBP24.38■■□□□ 1.49
ME3-202ENST00000393324 RPS6KA4O75676 772 aa24.38■■□□□ 1.49
ME3-202ENST00000393324 CHGBP05060 677 aa24.38■■□□□ 1.49
ME3-202ENST00000393324 VGLL2Q8N8G2 317 aa24.38■■□□□ 1.49
ME3-202ENST00000393324 KCNB2Q92953 911 aa24.38■■□□□ 1.49
ME3-202ENST00000393324 PDE8BO95263 885 aa24.37■■□□□ 1.49
ME3-202ENST00000393324 CCDC152Q4G0S7 254 aa24.37■■□□□ 1.49
ME3-202ENST00000393324 SPEF2Q9C093 1822 aa24.36■■□□□ 1.49
ME3-202ENST00000393324 GNPATO15228 680 aa24.36■■□□□ 1.49
ME3-202ENST00000393324 LY75O60449 1722 aa24.36■■□□□ 1.49
ME3-202ENST00000393324 LAMB2P55268 1798 aa24.36■■□□□ 1.49
ME3-202ENST00000393324 TAF5LO75529 589 aa24.35■■□□□ 1.49
ME3-202ENST00000393324 ZKSCAN1P17029 563 aaPredicted RBP24.35■■□□□ 1.49
ME3-202ENST00000393324 FKBP4Q02790 459 aaKnown RBP eCLIP24.35■■□□□ 1.49
ME3-202ENST00000393324 RAB3GAP1Q15042 981 aa24.35■■□□□ 1.49
ME3-202ENST00000393324 MCMDC2Q4G0Z9 681 aa24.35■■□□□ 1.49
ME3-202ENST00000393324 CREB3L3Q68CJ9 461 aa24.35■■□□□ 1.49
ME3-202ENST00000393324 NOL8Q76FK4 1167 aaKnown RBP24.35■■□□□ 1.49
ME3-202ENST00000393324 TICAM2Q86XR7 235 aa24.35■■□□□ 1.49
ME3-202ENST00000393324 SEC31BQ9NQW1 1179 aa24.35■■□□□ 1.49
ME3-202ENST00000393324 RGL2O15211 777 aa24.35■■□□□ 1.49
ME3-202ENST00000393324 SEC62Q99442 399 aaKnown RBP24.35■■□□□ 1.49
ME3-202ENST00000393324 LRP5O75197 1615 aa24.35■■□□□ 1.49
ME3-202ENST00000393324 CWC22Q9HCG8 908 aaKnown RBP24.34■■□□□ 1.49
ME3-202ENST00000393324 NARFQ9UHQ1 456 aa24.34■■□□□ 1.49
ME3-202ENST00000393324 TAF1LQ8IZX4 1826 aa24.34■■□□□ 1.49
ME3-202ENST00000393324 MROH5Q6ZUA9 1318 aa24.34■■□□□ 1.49
ME3-202ENST00000393324 CASTP20810 708 aaKnown RBP24.34■■□□□ 1.49
ME3-202ENST00000393324 USPL1Q5W0Q7 1092 aa24.34■■□□□ 1.49
ME3-202ENST00000393324 ZGPATQ8N5A5 531 aaKnown RBP24.34■■□□□ 1.49
ME3-202ENST00000393324 MPHOSPH8Q99549 860 aa24.34■■□□□ 1.49
ME3-202ENST00000393324 BCL2L12Q9HB09 334 aa24.34■■□□□ 1.49
ME3-202ENST00000393324 SCN7AQ01118 1682 aa24.34■■□□□ 1.49
ME3-202ENST00000393324 ADCK5Q3MIX3 580 aa24.33■■□□□ 1.49
ME3-202ENST00000393324 BICDL1Q6ZP65 573 aa24.33■■□□□ 1.49
ME3-202ENST00000393324 TNPO1Q92973 898 aaKnown RBP24.33■■□□□ 1.49
ME3-202ENST00000393324 JAKMIP1Q96N16 626 aaKnown RBP24.33■■□□□ 1.49
ME3-202ENST00000393324 TTC14Q96N46 770 aa24.33■■□□□ 1.49
ME3-202ENST00000393324 RTCBQ9Y3I0 505 aaKnown RBP24.33■■□□□ 1.49
ME3-202ENST00000393324 SLC27A2O14975 620 aa24.33■■□□□ 1.48
ME3-202ENST00000393324 MCM4P33991 863 aa24.33■■□□□ 1.48
ME3-202ENST00000393324 TBC1D9BQ66K14 1250 aa24.33■■□□□ 1.48
ME3-202ENST00000393324 CCDC129Q6ZRS4 1044 aa24.33■■□□□ 1.48
ME3-202ENST00000393324 RTL9Q8NET4 1388 aa24.32■■□□□ 1.48
ME3-202ENST00000393324 ABCC12Q96J65 1359 aa24.32■■□□□ 1.48
ME3-202ENST00000393324 SCARF1Q14162 830 aa24.32■■□□□ 1.48
ME3-202ENST00000393324 RNF20Q5VTR2 975 aa24.32■■□□□ 1.48
ME3-202ENST00000393324 HELBQ8NG08 1087 aaPredicted RBP24.32■■□□□ 1.48
ME3-202ENST00000393324 TM6SF1Q9BZW5 370 aa24.32■■□□□ 1.48
ME3-202ENST00000393324 SRP68Q9UHB9 627 aaKnown RBP24.32■■□□□ 1.48
ME3-202ENST00000393324 ZPR1O75312 459 aa24.31■■□□□ 1.48
ME3-202ENST00000393324 CUL4AQ13619 759 aa24.31■■□□□ 1.48
ME3-202ENST00000393324 ERFEQ4G0M1 354 aa24.31■■□□□ 1.48
ME3-202ENST00000393324 BCL11BQ9C0K0 894 aaPredicted RBP24.31■■□□□ 1.48
ME3-202ENST00000393324 HELLSQ9NRZ9 838 aa24.31■■□□□ 1.48
ME3-202ENST00000393324 PUM3Q15397 648 aaKnown RBP24.31■■□□□ 1.48
ME3-202ENST00000393324 SLFNL1Q499Z3 407 aa24.31■■□□□ 1.48
ME3-202ENST00000393324 CPA1P15085 419 aa24.3■■□□□ 1.48
ME3-202ENST00000393324 ZMYM1Q5SVZ6 1142 aa24.3■■□□□ 1.48
ME3-202ENST00000393324 ZSWIM6Q9HCJ5 1215 aa24.3■■□□□ 1.48
ME3-202ENST00000393324 RNF113AO15541 343 aaKnown RBP24.3■■□□□ 1.48
ME3-202ENST00000393324 SSFA2P28290 1259 aa24.3■■□□□ 1.48
ME3-202ENST00000393324 IGHMBP2P38935 993 aaKnown RBP24.3■■□□□ 1.48
ME3-202ENST00000393324 EP400Q96L91 3159 aa24.29■■□□□ 1.48
ME3-202ENST00000393324 ZAP70P43403 619 aa24.29■■□□□ 1.48
ME3-202ENST00000393324 AK2P54819 239 aa24.29■■□□□ 1.48
ME3-202ENST00000393324 AMIGO3Q86WK7 504 aa24.29■■□□□ 1.48
ME3-202ENST00000393324 LPIN2Q92539 896 aa24.29■■□□□ 1.48
ME3-202ENST00000393324 CYP46A1Q9Y6A2 500 aa24.29■■□□□ 1.48
ME3-202ENST00000393324 ZNF512BQ96KM6 892 aaPredicted RBP24.29■■□□□ 1.48
ME3-202ENST00000393324 HMG20BQ9P0W2 317 aa24.29■■□□□ 1.48
ME3-202ENST00000393324 AKAP11Q9UKA4 1901 aa24.28■■□□□ 1.48
ME3-202ENST00000393324 FGFR2P21802 821 aa24.28■■□□□ 1.48
ME3-202ENST00000393324 GTF2E1P29083 439 aaPredicted RBP24.28■■□□□ 1.48
ME3-202ENST00000393324 NUCB2P80303 420 aa24.28■■□□□ 1.48
ME3-202ENST00000393324 LRRFIP1Q32MZ4 808 aaKnown RBP24.28■■□□□ 1.48
ME3-202ENST00000393324 PI16Q6UXB8 463 aa24.28■■□□□ 1.48
ME3-202ENST00000393324 ARHGEF1Q92888 912 aaKnown RBP24.28■■□□□ 1.48
ME3-202ENST00000393324 SETDB2Q96T68 719 aa24.28■■□□□ 1.48
ME3-202ENST00000393324 MCAMP43121 646 aa24.27■■□□□ 1.48
ME3-202ENST00000393324 RUFY3Q7L099 469 aa24.27■■□□□ 1.48
ME3-202ENST00000393324 INTS4Q96HW7 963 aaKnown RBP24.27■■□□□ 1.48
ME3-202ENST00000393324 C4BP0C0L5 1744 aa24.27■■□□□ 1.48
ME3-202ENST00000393324 PSMA5P28066 241 aa24.27■■□□□ 1.48
ME3-202ENST00000393324 VPS53Q5VIR6 699 aa24.27■■□□□ 1.48
ME3-202ENST00000393324 PDRG1Q9NUG6 133 aa24.27■■□□□ 1.48
ME3-202ENST00000393324 U3KPZ7 1027 aaPredicted RBP24.27■■□□□ 1.48
ME3-202ENST00000393324 CCDC102BQ68D86 513 aa24.26■■□□□ 1.47
ME3-202ENST00000393324 RPAP1Q9BWH6 1393 aaPredicted RBP24.26■■□□□ 1.47
ME3-202ENST00000393324 SF3B3Q15393 1217 aaKnown RBP24.26■■□□□ 1.47
ME3-202ENST00000393324 TSGA10IPQ3SY00 556 aa24.26■■□□□ 1.47
ME3-202ENST00000393324 C3orf67Q6ZVT6 689 aa24.26■■□□□ 1.47
ME3-202ENST00000393324 GBP4Q96PP9 640 aa24.26■■□□□ 1.47
ME3-202ENST00000393324 CDC5LQ99459 802 aaKnown RBP24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms