RNA–Protein interactions for RNA: ENST00000392871.6

GTDC1-205, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 2

Gene GTDC1, Length 2,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-205ENST00000392871 TTC21AQ8NDW8 1320 aa5.6□□□□□ -1.51
GTDC1-205ENST00000392871 MAPK1P28482 360 aa5.6□□□□□ -1.51
GTDC1-205ENST00000392871 ARHGAP4P98171 946 aa5.6□□□□□ -1.51
GTDC1-205ENST00000392871 NUCB1Q02818 461 aa5.6□□□□□ -1.51
GTDC1-205ENST00000392871 PTPRNQ16849 979 aa5.6□□□□□ -1.51
GTDC1-205ENST00000392871 EML3Q32P44 896 aa5.6□□□□□ -1.51
GTDC1-205ENST00000392871 SCUBE3Q8IX30 993 aa5.6□□□□□ -1.51
GTDC1-205ENST00000392871 ADAM32Q8TC27 787 aa5.6□□□□□ -1.51
GTDC1-205ENST00000392871 DRC1Q96MC2 740 aa5.6□□□□□ -1.51
GTDC1-205ENST00000392871 DNMT3AQ9Y6K1 912 aaPredicted RBP5.6□□□□□ -1.51
GTDC1-205ENST00000392871 DCCP43146 1447 aa5.6□□□□□ -1.51
GTDC1-205ENST00000392871 CRB1P82279 1406 aa5.6□□□□□ -1.51
GTDC1-205ENST00000392871 MST1RQ04912 1400 aa5.6□□□□□ -1.51
GTDC1-205ENST00000392871 ICMTO60725 284 aa5.6□□□□□ -1.51
GTDC1-205ENST00000392871 HMGB1P09429 215 aaKnown RBP5.6□□□□□ -1.51
GTDC1-205ENST00000392871 TAS1R3Q7RTX0 852 aa5.6□□□□□ -1.51
GTDC1-205ENST00000392871 C1orf216Q8TAB5 229 aa5.6□□□□□ -1.51
GTDC1-205ENST00000392871 CXXC1Q9P0U4 656 aaPredicted RBP5.6□□□□□ -1.51
GTDC1-205ENST00000392871 ATP10DQ9P241 1426 aa5.6□□□□□ -1.51
GTDC1-205ENST00000392871 ZC3H4Q9UPT8 1303 aaKnown RBP5.59□□□□□ -1.51
GTDC1-205ENST00000392871 ARHGAP33O14559 1287 aa5.59□□□□□ -1.51
GTDC1-205ENST00000392871 XPCQ01831 940 aaPredicted RBP5.59□□□□□ -1.51
GTDC1-205ENST00000392871 CALD1Q05682 793 aaKnown RBP5.59□□□□□ -1.51
GTDC1-205ENST00000392871 PSME1Q06323 249 aa5.59□□□□□ -1.51
GTDC1-205ENST00000392871 LMOD3Q0VAK6 560 aa5.59□□□□□ -1.51
GTDC1-205ENST00000392871 MTHFSDQ2M296 383 aaKnown RBP5.59□□□□□ -1.51
GTDC1-205ENST00000392871 NAALADL2Q58DX5 795 aa5.59□□□□□ -1.51
GTDC1-205ENST00000392871 ANKRD45Q5TZF3 282 aa5.59□□□□□ -1.51
GTDC1-205ENST00000392871 CHD1LQ86WJ1 897 aa5.59□□□□□ -1.51
GTDC1-205ENST00000392871 GTF3C2Q8WUA4 911 aaPredicted RBP5.59□□□□□ -1.51
GTDC1-205ENST00000392871 SLC4A5Q9BY07 1137 aa5.59□□□□□ -1.51
GTDC1-205ENST00000392871 POTEMA6NI47 508 aa5.59□□□□□ -1.51
GTDC1-205ENST00000392871 BHMG1C9JSJ3 638 aaPredicted RBP5.59□□□□□ -1.51
GTDC1-205ENST00000392871 JUNDP17535 347 aa5.59□□□□□ -1.51
GTDC1-205ENST00000392871 LDLRAD1Q5T700 205 aa5.59□□□□□ -1.51
GTDC1-205ENST00000392871 PDXDC2PQ6P474 469 aa5.59□□□□□ -1.51
GTDC1-205ENST00000392871 GLYCTKQ8IVS8 523 aa5.59□□□□□ -1.51
GTDC1-205ENST00000392871 USHBP1Q8N6Y0 703 aa5.59□□□□□ -1.51
GTDC1-205ENST00000392871 ABTB2Q8N961 1025 aa5.59□□□□□ -1.51
GTDC1-205ENST00000392871 OTUD7AQ8TE49 926 aaPredicted RBP5.59□□□□□ -1.51
GTDC1-205ENST00000392871 LTV1Q96GA3 475 aaPredicted RBP5.59□□□□□ -1.51
GTDC1-205ENST00000392871 C8orf37Q96NL8 207 aa5.59□□□□□ -1.51
GTDC1-205ENST00000392871 C22orf23Q9BZE7 217 aa5.59□□□□□ -1.51
GTDC1-205ENST00000392871 ANTXR1Q9H6X2 564 aa5.59□□□□□ -1.51
GTDC1-205ENST00000392871 RNF19AQ9NV58 838 aa5.59□□□□□ -1.51
GTDC1-205ENST00000392871 ARHGEF10O15013 1369 aa5.59□□□□□ -1.52
GTDC1-205ENST00000392871 FLT4P35916 1363 aa5.59□□□□□ -1.52
GTDC1-205ENST00000392871 ZC3H6P61129 1189 aaKnown RBP5.58□□□□□ -1.52
GTDC1-205ENST00000392871 G2E3Q7L622 706 aa5.58□□□□□ -1.52
GTDC1-205ENST00000392871 SIX5Q8N196 739 aa5.58□□□□□ -1.52
GTDC1-205ENST00000392871 DDX17Q92841 729 aaKnown RBP5.58□□□□□ -1.52
GTDC1-205ENST00000392871 FAM161BQ96MY7 647 aa5.58□□□□□ -1.52
GTDC1-205ENST00000392871 UPF2Q9HAU5 1272 aaKnown RBP5.58□□□□□ -1.52
GTDC1-205ENST00000392871 PRDM9Q9NQV7 894 aa5.58□□□□□ -1.52
GTDC1-205ENST00000392871 LRRC37A3O60309 1634 aa5.58□□□□□ -1.52
GTDC1-205ENST00000392871 SBNO1A3KN83 1393 aa5.58□□□□□ -1.52
GTDC1-205ENST00000392871 FAM208AQ9UK61 1670 aaKnown RBP5.58□□□□□ -1.52
GTDC1-205ENST00000392871 F6X3S4 739 aa5.58□□□□□ -1.52
GTDC1-205ENST00000392871 CHL1O00533 1208 aa5.58□□□□□ -1.52
GTDC1-205ENST00000392871 VAMP1P23763 118 aa5.58□□□□□ -1.52
GTDC1-205ENST00000392871 AMPHP49418 695 aa5.58□□□□□ -1.52
GTDC1-205ENST00000392871 APLP1P51693 650 aa5.58□□□□□ -1.52
GTDC1-205ENST00000392871 PTK2Q05397 1052 aa5.58□□□□□ -1.52
GTDC1-205ENST00000392871 C16orf71Q8IYS4 520 aaPredicted RBP5.58□□□□□ -1.52
GTDC1-205ENST00000392871 TPCN2Q8NHX9 752 aa5.58□□□□□ -1.52
GTDC1-205ENST00000392871 ASB16Q96NS5 453 aa5.58□□□□□ -1.52
GTDC1-205ENST00000392871 MEIS3Q99687 375 aa5.58□□□□□ -1.52
GTDC1-205ENST00000392871 EVA1BQ9NVM1 165 aa5.58□□□□□ -1.52
GTDC1-205ENST00000392871 IGSF1Q8N6C5 1336 aa5.57□□□□□ -1.52
GTDC1-205ENST00000392871 GSPT1P15170 499 aaKnown RBP5.57□□□□□ -1.52
GTDC1-205ENST00000392871 OXLD1Q5BKU9 147 aa5.57□□□□□ -1.52
GTDC1-205ENST00000392871 CCDC102BQ68D86 513 aa5.57□□□□□ -1.52
GTDC1-205ENST00000392871 KRT28Q7Z3Y7 464 aa5.57□□□□□ -1.52
GTDC1-205ENST00000392871 LARGE2Q8N3Y3 721 aa5.57□□□□□ -1.52
GTDC1-205ENST00000392871 ARHGAP45Q92619 1136 aa5.57□□□□□ -1.52
GTDC1-205ENST00000392871 LTN1O94822 1766 aa5.57□□□□□ -1.52
GTDC1-205ENST00000392871 KDRP35968 1356 aa5.57□□□□□ -1.52
GTDC1-205ENST00000392871 LZTS3O60299 673 aaPredicted RBP5.57□□□□□ -1.52
GTDC1-205ENST00000392871 CD2BP2O95400 341 aaKnown RBP5.57□□□□□ -1.52
GTDC1-205ENST00000392871 GTF2IP78347 998 aa5.57□□□□□ -1.52
GTDC1-205ENST00000392871 FKBP5Q13451 457 aaPredicted RBP5.57□□□□□ -1.52
GTDC1-205ENST00000392871 BECN1Q14457 450 aa5.57□□□□□ -1.52
GTDC1-205ENST00000392871 MAP7D1Q3KQU3 841 aa5.57□□□□□ -1.52
GTDC1-205ENST00000392871 BRINP3Q76B58 766 aa5.57□□□□□ -1.52
GTDC1-205ENST00000392871 FAM160A2Q8N612 972 aaPredicted RBP5.57□□□□□ -1.52
GTDC1-205ENST00000392871 API5Q9BZZ5 524 aaKnown RBP5.57□□□□□ -1.52
GTDC1-205ENST00000392871 TSPYL4Q9UJ04 414 aa5.57□□□□□ -1.52
GTDC1-205ENST00000392871 BRPF3Q9ULD4 1205 aa5.57□□□□□ -1.52
GTDC1-205ENST00000392871 NOD1Q9Y239 953 aa5.57□□□□□ -1.52
GTDC1-205ENST00000392871 GPSM3Q9Y4H4 160 aa5.57□□□□□ -1.52
GTDC1-205ENST00000392871 RTL1A6NKG5 1358 aa5.57□□□□□ -1.52
GTDC1-205ENST00000392871 RGPD2P0DJD1 1756 aa5.56□□□□□ -1.52
GTDC1-205ENST00000392871 C21orf2O43822 256 aa5.56□□□□□ -1.52
GTDC1-205ENST00000392871 CCNYL3P0C7X3 344 aa5.56□□□□□ -1.52
GTDC1-205ENST00000392871 HOXC9P31274 260 aa5.56□□□□□ -1.52
GTDC1-205ENST00000392871 SEC13P55735 322 aa5.56□□□□□ -1.52
GTDC1-205ENST00000392871 VARS2Q5ST30 1063 aaKnown RBP5.56□□□□□ -1.52
GTDC1-205ENST00000392871 EGFL7Q9UHF1 273 aa5.56□□□□□ -1.52
GTDC1-205ENST00000392871 PCDHGA11Q9Y5H2 935 aa5.56□□□□□ -1.52
GTDC1-205ENST00000392871 GIGYF1O75420 1035 aaPredicted RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms