RNA–Protein interactions for RNA: ENST00000392035.6

C19orf47-202, Transcript of chromosome 19 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C19orf47, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf47-202ENST00000392035 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.68■■■□□ 2.34
C19orf47-202ENST00000392035 LRRC4BQ9NT99 713 aa29.68■■■□□ 2.34
C19orf47-202ENST00000392035 PTH1RQ03431 593 aa29.68■■■□□ 2.34
C19orf47-202ENST00000392035 CCDC158Q5M9N0 1113 aa29.68■■■□□ 2.34
C19orf47-202ENST00000392035 ARHGEF1Q92888 912 aaKnown RBP29.68■■■□□ 2.34
C19orf47-202ENST00000392035 SEC31BQ9NQW1 1179 aa29.68■■■□□ 2.34
C19orf47-202ENST00000392035 PAG1Q9NWQ8 432 aa29.68■■■□□ 2.34
C19orf47-202ENST00000392035 ERFEQ4G0M1 354 aa29.67■■■□□ 2.34
C19orf47-202ENST00000392035 GORABQ5T7V8 394 aa29.67■■■□□ 2.34
C19orf47-202ENST00000392035 KBTBD3Q8NAB2 608 aa29.67■■■□□ 2.34
C19orf47-202ENST00000392035 MED23Q9ULK4 1368 aa29.66■■■□□ 2.34
C19orf47-202ENST00000392035 CCDC171Q6TFL3 1326 aa29.66■■■□□ 2.34
C19orf47-202ENST00000392035 GOLIM4O00461 696 aa29.66■■■□□ 2.34
C19orf47-202ENST00000392035 PDE8BO95263 885 aa29.66■■■□□ 2.34
C19orf47-202ENST00000392035 SPEF2Q9C093 1822 aa29.66■■■□□ 2.34
C19orf47-202ENST00000392035 C4AP0C0L4 1744 aa29.66■■■□□ 2.34
C19orf47-202ENST00000392035 TTC39AQ5SRH9 613 aa29.65■■■□□ 2.34
C19orf47-202ENST00000392035 MROH5Q6ZUA9 1318 aa29.65■■■□□ 2.34
C19orf47-202ENST00000392035 NEK4P51957 841 aa29.65■■■□□ 2.34
C19orf47-202ENST00000392035 ZNF772Q68DY9 489 aaPredicted RBP29.65■■■□□ 2.34
C19orf47-202ENST00000392035 COL24A1Q17RW2 1714 aa29.64■■■□□ 2.34
C19orf47-202ENST00000392035 RBM6P78332 1123 aaKnown RBP29.63■■■□□ 2.33
C19orf47-202ENST00000392035 SETDB2Q96T68 719 aa29.63■■■□□ 2.33
C19orf47-202ENST00000392035 MPHOSPH8Q99549 860 aa29.63■■■□□ 2.33
C19orf47-202ENST00000392035 TRIM37O94972 964 aa29.63■■■□□ 2.33
C19orf47-202ENST00000392035 SNX14Q9Y5W7 946 aa29.63■■■□□ 2.33
C19orf47-202ENST00000392035 ABCC12Q96J65 1359 aa29.63■■■□□ 2.33
C19orf47-202ENST00000392035 CASZ1Q86V15 1759 aa29.63■■■□□ 2.33
C19orf47-202ENST00000392035 PHF14O94880 888 aa29.62■■■□□ 2.33
C19orf47-202ENST00000392035 HSP90AA1P07900 732 aaKnown RBP29.62■■■□□ 2.33
C19orf47-202ENST00000392035 TRAPPC3LQ5T215 181 aa29.62■■■□□ 2.33
C19orf47-202ENST00000392035 ZNF589Q86UQ0 364 aaPredicted RBP29.62■■■□□ 2.33
C19orf47-202ENST00000392035 DDIT3P35638 169 aa29.61■■■□□ 2.33
C19orf47-202ENST00000392035 NFKBIBQ15653 356 aa29.61■■■□□ 2.33
C19orf47-202ENST00000392035 TICAM2Q86XR7 235 aa29.61■■■□□ 2.33
C19orf47-202ENST00000392035 MAP4K1Q92918 833 aa29.61■■■□□ 2.33
C19orf47-202ENST00000392035 NYXQ9GZU5 481 aa29.61■■■□□ 2.33
C19orf47-202ENST00000392035 CHGBP05060 677 aa29.6■■■□□ 2.33
C19orf47-202ENST00000392035 GTF2E1P29083 439 aaPredicted RBP29.6■■■□□ 2.33
C19orf47-202ENST00000392035 RFC4P35249 363 aa29.6■■■□□ 2.33
C19orf47-202ENST00000392035 IGHMBP2P38935 993 aaKnown RBP29.6■■■□□ 2.33
C19orf47-202ENST00000392035 RASEFQ8IZ41 740 aa29.6■■■□□ 2.33
C19orf47-202ENST00000392035 CHMP5Q9NZZ3 219 aa29.6■■■□□ 2.33
C19orf47-202ENST00000392035 SF3B3Q15393 1217 aaKnown RBP29.6■■■□□ 2.33
C19orf47-202ENST00000392035 SLC10A5Q5PT55 438 aa29.6■■■□□ 2.33
C19orf47-202ENST00000392035 C3orf67Q6ZVT6 689 aa29.6■■■□□ 2.33
C19orf47-202ENST00000392035 PUM3Q15397 648 aaKnown RBP29.59■■■□□ 2.33
C19orf47-202ENST00000392035 SLC27A3Q5K4L6 730 aa29.59■■■□□ 2.33
C19orf47-202ENST00000392035 HELBQ8NG08 1087 aaPredicted RBP29.59■■■□□ 2.33
C19orf47-202ENST00000392035 FGFR2P21802 821 aa29.59■■■□□ 2.33
C19orf47-202ENST00000392035 FKBP4Q02790 459 aaKnown RBP eCLIP29.59■■■□□ 2.33
C19orf47-202ENST00000392035 SCARF1Q14162 830 aa29.59■■■□□ 2.33
C19orf47-202ENST00000392035 RBM8AQ9Y5S9 174 aaKnown RBP29.59■■■□□ 2.33
C19orf47-202ENST00000392035 UBR3Q6ZT12 1888 aa29.58■■■□□ 2.33
C19orf47-202ENST00000392035 NECTIN1Q15223 517 aa29.58■■■□□ 2.33
C19orf47-202ENST00000392035 PRPF40BQ6NWY9 871 aaKnown RBP29.58■■■□□ 2.33
C19orf47-202ENST00000392035 UPF3BQ9BZI7 483 aaKnown RBP29.58■■■□□ 2.33
C19orf47-202ENST00000392035 ARAP2Q8WZ64 1704 aa29.58■■■□□ 2.33
C19orf47-202ENST00000392035 NBPF5PQ86XG9 351 aaPredicted RBP29.57■■■□□ 2.32
C19orf47-202ENST00000392035 LPIN2Q92539 896 aa29.57■■■□□ 2.32
C19orf47-202ENST00000392035 KCNB2Q92953 911 aa29.57■■■□□ 2.32
C19orf47-202ENST00000392035 FOXD4L1Q9NU39 408 aa29.57■■■□□ 2.32
C19orf47-202ENST00000392035 MCMDC2Q4G0Z9 681 aa29.57■■■□□ 2.32
C19orf47-202ENST00000392035 CDC5LQ99459 802 aaKnown RBP29.57■■■□□ 2.32
C19orf47-202ENST00000392035 COL4A1P02462 1669 aa29.57■■■□□ 2.32
C19orf47-202ENST00000392035 AKAP11Q9UKA4 1901 aa29.57■■■□□ 2.32
C19orf47-202ENST00000392035 ADRA2BP18089 450 aa29.56■■■□□ 2.32
C19orf47-202ENST00000392035 TAF5LO75529 589 aa29.56■■■□□ 2.32
C19orf47-202ENST00000392035 MCM2P49736 904 aa29.56■■■□□ 2.32
C19orf47-202ENST00000392035 ZNF512BQ96KM6 892 aaPredicted RBP29.56■■■□□ 2.32
C19orf47-202ENST00000392035 SEC62Q99442 399 aaKnown RBP29.56■■■□□ 2.32
C19orf47-202ENST00000392035 KCNJ4P48050 445 aa29.55■■■□□ 2.32
C19orf47-202ENST00000392035 IL27Q8NEV9 243 aa29.55■■■□□ 2.32
C19orf47-202ENST00000392035 ZAP70P43403 619 aa29.54■■■□□ 2.32
C19orf47-202ENST00000392035 TPTE2Q6XPS3 522 aa29.54■■■□□ 2.32
C19orf47-202ENST00000392035 TAF1P21675 1872 aa29.54■■■□□ 2.32
C19orf47-202ENST00000392035 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.54■■■□□ 2.32
C19orf47-202ENST00000392035 CREB3L3Q68CJ9 461 aa29.54■■■□□ 2.32
C19orf47-202ENST00000392035 MCAMP43121 646 aa29.53■■■□□ 2.32
C19orf47-202ENST00000392035 CCDC129Q6ZRS4 1044 aa29.53■■■□□ 2.32
C19orf47-202ENST00000392035 HELLSQ9NRZ9 838 aa29.53■■■□□ 2.32
C19orf47-202ENST00000392035 SLC5A1P13866 664 aa29.53■■■□□ 2.32
C19orf47-202ENST00000392035 SLFNL1Q499Z3 407 aa29.53■■■□□ 2.32
C19orf47-202ENST00000392035 CCDC102BQ68D86 513 aa29.53■■■□□ 2.32
C19orf47-202ENST00000392035 PI16Q6UXB8 463 aa29.53■■■□□ 2.32
C19orf47-202ENST00000392035 CIZ1Q9ULV3 898 aaPredicted RBP29.53■■■□□ 2.32
C19orf47-202ENST00000392035 RNF113AO15541 343 aaKnown RBP29.52■■■□□ 2.32
C19orf47-202ENST00000392035 ZMYM1Q5SVZ6 1142 aa29.52■■■□□ 2.32
C19orf47-202ENST00000392035 ANKRD18AQ8IVF6 992 aa29.52■■■□□ 2.32
C19orf47-202ENST00000392035 ZKSCAN1P17029 563 aaPredicted RBP29.51■■■□□ 2.32
C19orf47-202ENST00000392035 PHKA1P46020 1223 aa29.51■■■□□ 2.32
C19orf47-202ENST00000392035 SNAP23O00161 211 aa29.51■■■□□ 2.31
C19orf47-202ENST00000392035 SSFA2P28290 1259 aa29.51■■■□□ 2.31
C19orf47-202ENST00000392035 CHRNDQ07001 517 aa29.51■■■□□ 2.31
C19orf47-202ENST00000392035 NLRP3Q96P20 1036 aa29.51■■■□□ 2.31
C19orf47-202ENST00000392035 SLC27A2O14975 620 aa29.5■■■□□ 2.31
C19orf47-202ENST00000392035 FRAT2O75474 233 aaPredicted RBP29.5■■■□□ 2.31
C19orf47-202ENST00000392035 ARID4AP29374 1257 aaPredicted RBP29.5■■■□□ 2.31
C19orf47-202ENST00000392035 LRRFIP1Q32MZ4 808 aaKnown RBP29.5■■■□□ 2.31
C19orf47-202ENST00000392035 TMX3Q96JJ7 454 aa29.5■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms