RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 TRPC5Q9UL62 973 aaPredicted RBP11.89□□□□□ -0.51
PKP4-201ENST00000389757 TTC37Q6PGP7 1564 aa11.89□□□□□ -0.51
PKP4-201ENST00000389757 NMIQ13287 307 aaPredicted RBP11.88□□□□□ -0.51
PKP4-201ENST00000389757 CCDC148Q8NFR7 591 aa11.88□□□□□ -0.51
PKP4-201ENST00000389757 GGA1Q9UJY5 639 aa11.88□□□□□ -0.51
PKP4-201ENST00000389757 NBPF7P0C2Y1 421 aaPredicted RBP11.88□□□□□ -0.51
PKP4-201ENST00000389757 RTN1Q16799 776 aa11.88□□□□□ -0.51
PKP4-201ENST00000389757 SAMM50Q9Y512 469 aa11.88□□□□□ -0.51
PKP4-201ENST00000389757 HECW2Q9P2P5 1572 aa11.88□□□□□ -0.51
PKP4-201ENST00000389757 HIBADHP31937 336 aaKnown RBP11.88□□□□□ -0.51
PKP4-201ENST00000389757 TNNQ9UQP3 1299 aa11.88□□□□□ -0.51
PKP4-201ENST00000389757 JAG2Q9Y219 1238 aa11.88□□□□□ -0.51
PKP4-201ENST00000389757 POTEJP0CG39 1038 aa11.87□□□□□ -0.51
PKP4-201ENST00000389757 UBA7P41226 1012 aa11.87□□□□□ -0.51
PKP4-201ENST00000389757 PUM3Q15397 648 aaKnown RBP11.87□□□□□ -0.51
PKP4-201ENST00000389757 KLHL10Q6JEL2 608 aa11.87□□□□□ -0.51
PKP4-201ENST00000389757 CNNM3Q8NE01 707 aa11.87□□□□□ -0.51
PKP4-201ENST00000389757 FGFR1OPO95684 399 aaKnown RBP11.87□□□□□ -0.51
PKP4-201ENST00000389757 AMPD3Q01432 767 aa11.87□□□□□ -0.51
PKP4-201ENST00000389757 ZBTB40Q9NUA8 1239 aa11.87□□□□□ -0.51
PKP4-201ENST00000389757 ANO10Q9NW15 660 aa11.87□□□□□ -0.51
PKP4-201ENST00000389757 GJA3Q9Y6H8 435 aa11.87□□□□□ -0.51
PKP4-201ENST00000389757 STX6O43752 255 aa11.87□□□□□ -0.51
PKP4-201ENST00000389757 PHKG2P15735 406 aa11.87□□□□□ -0.51
PKP4-201ENST00000389757 CFAP100Q494V2 611 aa11.87□□□□□ -0.51
PKP4-201ENST00000389757 TTC6Q86TZ1 520 aa11.87□□□□□ -0.51
PKP4-201ENST00000389757 RLBP1P12271 317 aa11.86□□□□□ -0.51
PKP4-201ENST00000389757 PYM1Q9BRP8 204 aaKnown RBP11.86□□□□□ -0.51
PKP4-201ENST00000389757 DPP8Q6V1X1 898 aaPredicted RBP11.86□□□□□ -0.51
PKP4-201ENST00000389757 FLAD1Q8NFF5 587 aa11.86□□□□□ -0.51
PKP4-201ENST00000389757 LRRC2Q9BYS8 371 aa11.86□□□□□ -0.51
PKP4-201ENST00000389757 QTRT2Q9H974 415 aaKnown RBP11.86□□□□□ -0.51
PKP4-201ENST00000389757 ERVK-7P63135 1459 aa11.86□□□□□ -0.51
PKP4-201ENST00000389757 FKBP15Q5T1M5 1219 aa11.86□□□□□ -0.51
PKP4-201ENST00000389757 TRMT1LQ7Z2T5 733 aaKnown RBP11.86□□□□□ -0.51
PKP4-201ENST00000389757 PPFIA3O75145 1194 aa11.86□□□□□ -0.51
PKP4-201ENST00000389757 ANAPC15P60006 121 aa11.86□□□□□ -0.51
PKP4-201ENST00000389757 EIF4A1P60842 406 aaKnown RBP11.86□□□□□ -0.51
PKP4-201ENST00000389757 HSP90B2PQ58FF3 399 aa11.86□□□□□ -0.51
PKP4-201ENST00000389757 FSIP1Q8NA03 581 aa11.86□□□□□ -0.51
PKP4-201ENST00000389757 ZNF397Q8NF99 534 aaPredicted RBP11.86□□□□□ -0.51
PKP4-201ENST00000389757 TRIM35Q9UPQ4 493 aa11.86□□□□□ -0.51
PKP4-201ENST00000389757 A0A1B0GUL7 405 aa11.86□□□□□ -0.51
PKP4-201ENST00000389757 CTAGE5O15320 804 aa11.86□□□□□ -0.51
PKP4-201ENST00000389757 CALM1P0DP23 149 aa11.86□□□□□ -0.51
PKP4-201ENST00000389757 CALM2P0DP24 149 aa11.86□□□□□ -0.51
PKP4-201ENST00000389757 CALM3P0DP25 149 aa11.86□□□□□ -0.51
PKP4-201ENST00000389757 TBC1D2Q9BYX2 928 aa11.86□□□□□ -0.51
PKP4-201ENST00000389757 INSRP06213 1382 aa11.86□□□□□ -0.51
PKP4-201ENST00000389757 SBNO2Q9Y2G9 1366 aa11.86□□□□□ -0.51
PKP4-201ENST00000389757 SUPT20HQ8NEM7 779 aa11.85□□□□□ -0.51
PKP4-201ENST00000389757 PRC1O43663 620 aa11.85□□□□□ -0.51
PKP4-201ENST00000389757 IDEP14735 1019 aa11.85□□□□□ -0.51
PKP4-201ENST00000389757 RBM25P49756 843 aaKnown RBP11.85□□□□□ -0.51
PKP4-201ENST00000389757 STXBP4Q6ZWJ1 553 aa11.85□□□□□ -0.51
PKP4-201ENST00000389757 HEATR3Q7Z4Q2 680 aa11.85□□□□□ -0.51
PKP4-201ENST00000389757 USP19O94966 1318 aa11.85□□□□□ -0.51
PKP4-201ENST00000389757 LIG1P18858 919 aa11.85□□□□□ -0.51
PKP4-201ENST00000389757 LARGE2Q8N3Y3 721 aa11.85□□□□□ -0.51
PKP4-201ENST00000389757 ERMNQ8TAM6 284 aa11.85□□□□□ -0.51
PKP4-201ENST00000389757 RBM27Q9P2N5 1060 aaKnown RBP11.85□□□□□ -0.51
PKP4-201ENST00000389757 CCDC183Q5T5S1 534 aa11.85□□□□□ -0.51
PKP4-201ENST00000389757 FILIP1Q7Z7B0 1213 aa11.85□□□□□ -0.51
PKP4-201ENST00000389757 TCEANC2Q96MN5 208 aa11.85□□□□□ -0.51
PKP4-201ENST00000389757 ALG1Q9BT22 464 aa11.85□□□□□ -0.51
PKP4-201ENST00000389757 RTL9Q8NET4 1388 aa11.85□□□□□ -0.51
PKP4-201ENST00000389757 KIAA0232Q92628 1395 aa11.85□□□□□ -0.51
PKP4-201ENST00000389757 TEX11Q8IYF3 940 aa11.84□□□□□ -0.51
PKP4-201ENST00000389757 ERCC4Q92889 916 aaPredicted RBP11.84□□□□□ -0.51
PKP4-201ENST00000389757 TFIP11Q9UBB9 837 aaKnown RBP11.84□□□□□ -0.51
PKP4-201ENST00000389757 MAST3O60307 1309 aa11.84□□□□□ -0.51
PKP4-201ENST00000389757 B4DLN1 442 aa11.84□□□□□ -0.51
PKP4-201ENST00000389757 MRPL12P52815 198 aaKnown RBP11.84□□□□□ -0.51
PKP4-201ENST00000389757 EIF6P56537 245 aaKnown RBP11.84□□□□□ -0.51
PKP4-201ENST00000389757 CCDC181Q5TID7 509 aa11.84□□□□□ -0.51
PKP4-201ENST00000389757 ZNF772Q68DY9 489 aaPredicted RBP11.84□□□□□ -0.51
PKP4-201ENST00000389757 GCC2Q8IWJ2 1684 aa11.84□□□□□ -0.51
PKP4-201ENST00000389757 SYCE3A1L190 88 aa11.84□□□□□ -0.51
PKP4-201ENST00000389757 TIMM10P62072 90 aa11.84□□□□□ -0.51
PKP4-201ENST00000389757 Q6ZUG5 572 aa11.84□□□□□ -0.51
PKP4-201ENST00000389757 SMARCC2Q8TAQ2 1214 aa11.84□□□□□ -0.51
PKP4-201ENST00000389757 LRRC27Q9C0I9 530 aa11.84□□□□□ -0.51
PKP4-201ENST00000389757 BMP15O95972 392 aa11.84□□□□□ -0.51
PKP4-201ENST00000389757 NAPAP54920 295 aa11.84□□□□□ -0.51
PKP4-201ENST00000389757 GCKRQ14397 625 aa11.84□□□□□ -0.51
PKP4-201ENST00000389757 ZSCAN16Q9H4T2 348 aaPredicted RBP11.84□□□□□ -0.51
PKP4-201ENST00000389757 RAD50Q92878 1312 aa11.84□□□□□ -0.51
PKP4-201ENST00000389757 SSFA2P28290 1259 aa11.84□□□□□ -0.51
PKP4-201ENST00000389757 CCDC150Q8NCX0 1101 aa11.84□□□□□ -0.51
PKP4-201ENST00000389757 ALDH1B1P30837 517 aa11.83□□□□□ -0.52
PKP4-201ENST00000389757 TNNI3KQ59H18 835 aa11.83□□□□□ -0.52
PKP4-201ENST00000389757 NECAB1Q8N987 351 aa11.83□□□□□ -0.52
PKP4-201ENST00000389757 TBC1D32Q96NH3 1257 aa11.83□□□□□ -0.52
PKP4-201ENST00000389757 CARD10Q9BWT7 1032 aa11.83□□□□□ -0.52
PKP4-201ENST00000389757 FPGT-TNNI3KV9GXZ4 949 aa11.83□□□□□ -0.52
PKP4-201ENST00000389757 PREX2Q70Z35 1606 aa11.83□□□□□ -0.52
PKP4-201ENST00000389757 EPB41L2O43491 1005 aaKnown RBP11.83□□□□□ -0.52
PKP4-201ENST00000389757 MBD4O95243 580 aa11.83□□□□□ -0.52
PKP4-201ENST00000389757 DDX19AQ9NUU7 478 aaKnown RBP11.83□□□□□ -0.52
PKP4-201ENST00000389757 CCDC171Q6TFL3 1326 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms