RNA–Protein interactions for RNA: ENST00000389005.5

NCBP3-201, Transcript of nuclear cap binding subunit 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NCBP3, Length 12,770 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-201ENST00000389005 SNRPA1P09661 255 aaKnown RBP9.15□□□□□ -0.94
NCBP3-201ENST00000389005 ZRSR2Q15696 482 aaKnown RBP9.15□□□□□ -0.94
NCBP3-201ENST00000389005 NPATQ14207 1427 aa9.15□□□□□ -0.94
NCBP3-201ENST00000389005 ANKRD24Q8TF21 1146 aa9.15□□□□□ -0.94
NCBP3-201ENST00000389005 TMOD3Q9NYL9 352 aa9.15□□□□□ -0.94
NCBP3-201ENST00000389005 TRMT112Q9UI30 125 aaKnown RBP9.15□□□□□ -0.94
NCBP3-201ENST00000389005 BMP15O95972 392 aa9.15□□□□□ -0.94
NCBP3-201ENST00000389005 TRIM21P19474 475 aaKnown RBP9.15□□□□□ -0.94
NCBP3-201ENST00000389005 CAVIN4Q5BKX8 364 aa9.15□□□□□ -0.94
NCBP3-201ENST00000389005 JADE2Q9NQC1 790 aa9.15□□□□□ -0.94
NCBP3-201ENST00000389005 ABCC1P33527 1531 aa9.15□□□□□ -0.94
NCBP3-201ENST00000389005 RIMS2Q9UQ26 1411 aa9.15□□□□□ -0.94
NCBP3-201ENST00000389005 PTPDC1A2A3K4 754 aa9.15□□□□□ -0.94
NCBP3-201ENST00000389005 KIF5BP33176 963 aa9.15□□□□□ -0.94
NCBP3-201ENST00000389005 IBSPP21815 317 aaPredicted RBP9.15□□□□□ -0.95
NCBP3-201ENST00000389005 ADAMTS12P58397 1594 aa9.15□□□□□ -0.95
NCBP3-201ENST00000389005 GADD45BO75293 160 aaPredicted RBP9.15□□□□□ -0.95
NCBP3-201ENST00000389005 BRD1O95696 1058 aa9.15□□□□□ -0.95
NCBP3-201ENST00000389005 TMEM266Q2M3C6 531 aa9.15□□□□□ -0.95
NCBP3-201ENST00000389005 RRAGBQ5VZM2 374 aa9.15□□□□□ -0.95
NCBP3-201ENST00000389005 CEP112Q8N8E3 955 aa9.15□□□□□ -0.95
NCBP3-201ENST00000389005 RSPH14Q9UHP6 348 aa9.15□□□□□ -0.95
NCBP3-201ENST00000389005 MATR3P43243 847 aaKnown RBP eCLIP9.15□□□□□ -0.95
NCBP3-201ENST00000389005 ZNF75DP51815 510 aa9.15□□□□□ -0.95
NCBP3-201ENST00000389005 GAS2L3Q86XJ1 694 aa9.15□□□□□ -0.95
NCBP3-201ENST00000389005 ZNF287Q9HBT7 754 aa9.15□□□□□ -0.95
NCBP3-201ENST00000389005 COPS6Q7L5N1 327 aa9.14□□□□□ -0.95
NCBP3-201ENST00000389005 G2E3Q7L622 706 aa9.14□□□□□ -0.95
NCBP3-201ENST00000389005 CTAGE9A4FU28 777 aa9.14□□□□□ -0.95
NCBP3-201ENST00000389005 AFMP43652 599 aa9.14□□□□□ -0.95
NCBP3-201ENST00000389005 CCDC178Q5BJE1 867 aa9.14□□□□□ -0.95
NCBP3-201ENST00000389005 MKNK2Q9HBH9 465 aa9.14□□□□□ -0.95
NCBP3-201ENST00000389005 LDHAL6AQ6ZMR3 332 aa9.14□□□□□ -0.95
NCBP3-201ENST00000389005 TRIM47Q96LD4 638 aa9.14□□□□□ -0.95
NCBP3-201ENST00000389005 TCP11L1Q9NUJ3 509 aa9.14□□□□□ -0.95
NCBP3-201ENST00000389005 PRC1O43663 620 aa9.14□□□□□ -0.95
NCBP3-201ENST00000389005 RTN1Q16799 776 aa9.14□□□□□ -0.95
NCBP3-201ENST00000389005 INCENPQ9NQS7 918 aa9.14□□□□□ -0.95
NCBP3-201ENST00000389005 SGSM2O43147 1006 aa9.14□□□□□ -0.95
NCBP3-201ENST00000389005 DYDC1Q8WWB3 177 aa9.14□□□□□ -0.95
NCBP3-201ENST00000389005 RMND1Q9NWS8 449 aa9.14□□□□□ -0.95
NCBP3-201ENST00000389005 FLT4P35916 1363 aa9.14□□□□□ -0.95
NCBP3-201ENST00000389005 WTAPQ15007 396 aa9.14□□□□□ -0.95
NCBP3-201ENST00000389005 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.14□□□□□ -0.952e-25■■■■■ 316.7
NCBP3-201ENST00000389005 ZNF500O60304 480 aaPredicted RBP9.14□□□□□ -0.95
NCBP3-201ENST00000389005 CCDC113Q9H0I3 377 aa9.14□□□□□ -0.95
NCBP3-201ENST00000389005 PTPRTO14522 1441 aa9.14□□□□□ -0.95
NCBP3-201ENST00000389005 MAST1Q9Y2H9 1570 aa9.14□□□□□ -0.95
NCBP3-201ENST00000389005 ATL3Q6DD88 541 aa9.14□□□□□ -0.95
NCBP3-201ENST00000389005 MAATS1Q7Z4T9 603 aa9.14□□□□□ -0.95
NCBP3-201ENST00000389005 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.14□□□□□ -0.95
NCBP3-201ENST00000389005 KIF20AO95235 890 aa9.14□□□□□ -0.95
NCBP3-201ENST00000389005 IDEP14735 1019 aa9.14□□□□□ -0.95
NCBP3-201ENST00000389005 APOBRQ0VD83 1088 aa9.14□□□□□ -0.95
NCBP3-201ENST00000389005 BRAPQ7Z569 592 aa9.14□□□□□ -0.95
NCBP3-201ENST00000389005 CLSTN2Q9H4D0 955 aa9.14□□□□□ -0.95
NCBP3-201ENST00000389005 PAG1Q9NWQ8 432 aa9.14□□□□□ -0.95
NCBP3-201ENST00000389005 CBX8Q9HC52 389 aa9.14□□□□□ -0.95
NCBP3-201ENST00000389005 CHL1O00533 1208 aa9.13□□□□□ -0.95
NCBP3-201ENST00000389005 GTF3C6Q969F1 213 aa9.13□□□□□ -0.95
NCBP3-201ENST00000389005 BCCIPQ9P287 314 aaKnown RBP eCLIP9.13□□□□□ -0.95
NCBP3-201ENST00000389005 CAPN2P17655 700 aa9.13□□□□□ -0.95
NCBP3-201ENST00000389005 IFNL2Q8IZJ0 200 aa9.13□□□□□ -0.95
NCBP3-201ENST00000389005 IL15P40933 162 aaPredicted RBP9.13□□□□□ -0.95
NCBP3-201ENST00000389005 CCDC40Q4G0X9 1142 aa9.13□□□□□ -0.95
NCBP3-201ENST00000389005 KRT23Q9C075 422 aa9.13□□□□□ -0.95
NCBP3-201ENST00000389005 GPTP24298 496 aa9.13□□□□□ -0.95
NCBP3-201ENST00000389005 CYLC1P35663 651 aaPredicted RBP9.13□□□□□ -0.95
NCBP3-201ENST00000389005 MNAT1P51948 309 aa9.13□□□□□ -0.95
NCBP3-201ENST00000389005 SNX14Q9Y5W7 946 aa9.13□□□□□ -0.95
NCBP3-201ENST00000389005 LMBR1LQ6UX01 489 aa9.13□□□□□ -0.95
NCBP3-201ENST00000389005 DZIP1Q86YF9 867 aaKnown RBP9.13□□□□□ -0.95
NCBP3-201ENST00000389005 ANKRD18AQ8IVF6 992 aa9.13□□□□□ -0.95
NCBP3-201ENST00000389005 HSPA4P34932 840 aa9.13□□□□□ -0.95
NCBP3-201ENST00000389005 MAP3K5Q99683 1374 aa9.13□□□□□ -0.95
NCBP3-201ENST00000389005 IL13P35225 146 aa9.13□□□□□ -0.95
NCBP3-201ENST00000389005 ZNF76P36508 570 aa9.13□□□□□ -0.95
NCBP3-201ENST00000389005 TUBB4BP68371 445 aa9.13□□□□□ -0.95
NCBP3-201ENST00000389005 SPECC1Q5M775 1068 aa9.13□□□□□ -0.95
NCBP3-201ENST00000389005 ANTXR1Q9H6X2 564 aa9.13□□□□□ -0.95
NCBP3-201ENST00000389005 PIP4K2BP78356 416 aa9.12□□□□□ -0.95
NCBP3-201ENST00000389005 MAP2K1Q02750 393 aaPredicted RBP9.12□□□□□ -0.95
NCBP3-201ENST00000389005 U2AF2P26368 475 aaKnown RBP eCLIP9.12□□□□□ -0.952e-6■■□□□ 13
NCBP3-201ENST00000389005 AMPD3Q01432 767 aa9.12□□□□□ -0.95
NCBP3-201ENST00000389005 CWF19L2Q2TBE0 894 aaKnown RBP9.12□□□□□ -0.95
NCBP3-201ENST00000389005 BICDL1Q6ZP65 573 aa9.12□□□□□ -0.95
NCBP3-201ENST00000389005 UBA5Q9GZZ9 404 aa9.12□□□□□ -0.95
NCBP3-201ENST00000389005 KARSQ15046 597 aaKnown RBP9.12□□□□□ -0.95
NCBP3-201ENST00000389005 RPS6KB1P23443 525 aa9.12□□□□□ -0.95
NCBP3-201ENST00000389005 TMEM132AQ24JP5 1023 aa9.12□□□□□ -0.95
NCBP3-201ENST00000389005 CALML4Q96GE6 196 aa9.12□□□□□ -0.95
NCBP3-201ENST00000389005 GBP2P32456 591 aaPredicted RBP9.12□□□□□ -0.95
NCBP3-201ENST00000389005 CHST3Q7LGC8 479 aa9.12□□□□□ -0.95
NCBP3-201ENST00000389005 ABCC4O15439 1325 aa9.12□□□□□ -0.95
NCBP3-201ENST00000389005 ABCC2Q92887 1545 aa9.12□□□□□ -0.95
NCBP3-201ENST00000389005 GSPT1P15170 499 aaKnown RBP9.12□□□□□ -0.95
NCBP3-201ENST00000389005 SSR1P43307 286 aaKnown RBP9.12□□□□□ -0.95
NCBP3-201ENST00000389005 HSF2BPO75031 334 aa9.12□□□□□ -0.95
NCBP3-201ENST00000389005 PKP1Q13835 747 aa9.12□□□□□ -0.95
NCBP3-201ENST00000389005 ELF2Q15723 593 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms