RNA–Protein interactions for RNA: ENST00000383991.1

RNU6-546P-201, Transcript of RNA, U6 small nuclear 546, pseudogene, humanhuman

BASIC

Gene RNU6-546P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-546P-201ENST00000383991 PPM1HQ9ULR3 514 aa3.44□□□□□ -1.86
RNU6-546P-201ENST00000383991 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.44□□□□□ -1.86
RNU6-546P-201ENST00000383991 TMEM238LA0A1B0GVL6 79 aa3.43□□□□□ -1.86
RNU6-546P-201ENST00000383991 MMP20O60882 483 aa3.43□□□□□ -1.86
RNU6-546P-201ENST00000383991 XRCC5P13010 732 aaKnown RBP3.43□□□□□ -1.86
RNU6-546P-201ENST00000383991 TARSP26639 723 aaKnown RBP3.43□□□□□ -1.86
RNU6-546P-201ENST00000383991 SMCPP49901 116 aaPredicted RBP3.43□□□□□ -1.86
RNU6-546P-201ENST00000383991 FCGRTP55899 365 aa3.43□□□□□ -1.86
RNU6-546P-201ENST00000383991 SFSWAPQ12872 951 aaKnown RBP3.43□□□□□ -1.86
RNU6-546P-201ENST00000383991 PWP1Q13610 501 aa3.43□□□□□ -1.86
RNU6-546P-201ENST00000383991 LAMC2Q13753 1193 aa3.43□□□□□ -1.86
RNU6-546P-201ENST00000383991 CTC1Q2NKJ3 1217 aa3.43□□□□□ -1.86
RNU6-546P-201ENST00000383991 CCDC144BQ3MJ40 725 aa3.43□□□□□ -1.86
RNU6-546P-201ENST00000383991 EFHC2Q5JST6 749 aa3.43□□□□□ -1.86
RNU6-546P-201ENST00000383991 FIGNL1Q6PIW4 674 aa3.43□□□□□ -1.86
RNU6-546P-201ENST00000383991 RELL1Q8IUW5 271 aa3.43□□□□□ -1.86
RNU6-546P-201ENST00000383991 GPRASP2Q96D09 838 aa3.43□□□□□ -1.86
RNU6-546P-201ENST00000383991 TCF12Q99081 682 aa3.43□□□□□ -1.86
RNU6-546P-201ENST00000383991 GAS2L1Q99501 681 aaPredicted RBP3.43□□□□□ -1.86
RNU6-546P-201ENST00000383991 LATS2Q9NRM7 1088 aa3.43□□□□□ -1.86
RNU6-546P-201ENST00000383991 ADAMTS1Q9UHI8 967 aa3.43□□□□□ -1.86
RNU6-546P-201ENST00000383991 DNMT3LQ9UJW3 386 aa3.43□□□□□ -1.86
RNU6-546P-201ENST00000383991 TTF2Q9UNY4 1162 aaKnown RBP3.43□□□□□ -1.86
RNU6-546P-201ENST00000383991 PCDHGC4Q9Y5F7 938 aa3.43□□□□□ -1.86
RNU6-546P-201ENST00000383991 SENP3-EIF4A1A0A087X0R7 540 aa3.42□□□□□ -1.86
RNU6-546P-201ENST00000383991 PHF20L1A8MW92 1017 aa3.42□□□□□ -1.86
RNU6-546P-201ENST00000383991 ATXN7O15265 892 aaPredicted RBP3.42□□□□□ -1.86
RNU6-546P-201ENST00000383991 STK10O94804 968 aaKnown RBP3.42□□□□□ -1.86
RNU6-546P-201ENST00000383991 KIF4AO95239 1232 aa3.42□□□□□ -1.86
RNU6-546P-201ENST00000383991 MAP3K6O95382 1288 aa3.42□□□□□ -1.86
RNU6-546P-201ENST00000383991 THBS1P07996 1170 aa3.42□□□□□ -1.86
RNU6-546P-201ENST00000383991 HOXD8P13378 290 aaPredicted RBP3.42□□□□□ -1.86
RNU6-546P-201ENST00000383991 BMP1P13497 986 aa3.42□□□□□ -1.86
RNU6-546P-201ENST00000383991 SOX18P35713 384 aa3.42□□□□□ -1.86
RNU6-546P-201ENST00000383991 TNP2Q05952 138 aa3.42□□□□□ -1.86
RNU6-546P-201ENST00000383991 UBAP2LQ14157 1087 aaKnown RBP3.42□□□□□ -1.86
RNU6-546P-201ENST00000383991 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.42□□□□□ -1.86
RNU6-546P-201ENST00000383991 SV2BQ7L1I2 683 aa3.42□□□□□ -1.86
RNU6-546P-201ENST00000383991 CCNJLQ8IV13 435 aa3.42□□□□□ -1.86
RNU6-546P-201ENST00000383991 PMFBP1Q8TBY8 1022 aa3.42□□□□□ -1.86
RNU6-546P-201ENST00000383991 SEC16BQ96JE7 1060 aa3.42□□□□□ -1.86
RNU6-546P-201ENST00000383991 ZFP42Q96MM3 310 aa3.42□□□□□ -1.86
RNU6-546P-201ENST00000383991 TMEM74Q96NL1 305 aa3.42□□□□□ -1.86
RNU6-546P-201ENST00000383991 CNTNAP3BQ96NU0 1288 aa3.42□□□□□ -1.86
RNU6-546P-201ENST00000383991 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.42□□□□□ -1.86
RNU6-546P-201ENST00000383991 SPON2Q9BUD6 331 aa3.42□□□□□ -1.86
RNU6-546P-201ENST00000383991 OXCT2Q9BYC2 517 aaPredicted RBP3.42□□□□□ -1.86
RNU6-546P-201ENST00000383991 CNTNAP3Q9BZ76 1288 aa3.42□□□□□ -1.86
RNU6-546P-201ENST00000383991 EFCC1Q9HA90 598 aa3.42□□□□□ -1.86
RNU6-546P-201ENST00000383991 LIN7BQ9HAP6 207 aa3.42□□□□□ -1.86
RNU6-546P-201ENST00000383991 ABCB6Q9NP58 842 aa3.42□□□□□ -1.86
RNU6-546P-201ENST00000383991 KCNQ5Q9NR82 932 aa3.42□□□□□ -1.86
RNU6-546P-201ENST00000383991 TLR7Q9NYK1 1049 aaKnown RBP3.42□□□□□ -1.86
RNU6-546P-201ENST00000383991 ZFATQ9P243 1243 aa3.42□□□□□ -1.86
RNU6-546P-201ENST00000383991 KANSL3Q9P2N6 904 aa3.42□□□□□ -1.86
RNU6-546P-201ENST00000383991 TLDC2A0PJX2 215 aa3.41□□□□□ -1.86
RNU6-546P-201ENST00000383991 FAM187AA6NFU0 413 aa3.41□□□□□ -1.86
RNU6-546P-201ENST00000383991 RARAP10276 462 aa3.41□□□□□ -1.86
RNU6-546P-201ENST00000383991 RLBP1P12271 317 aa3.41□□□□□ -1.86
RNU6-546P-201ENST00000383991 EIF4A3P38919 411 aaKnown RBP3.41□□□□□ -1.86
RNU6-546P-201ENST00000383991 HYAL2Q12891 473 aa3.41□□□□□ -1.86
RNU6-546P-201ENST00000383991 CCDC85BQ15834 202 aaPredicted RBP3.41□□□□□ -1.86
RNU6-546P-201ENST00000383991 COL13A1Q5TAT6 717 aaPredicted RBP3.41□□□□□ -1.86
RNU6-546P-201ENST00000383991 DTHD1Q6ZMT9 781 aa3.41□□□□□ -1.86
RNU6-546P-201ENST00000383991 KRT25Q7Z3Z0 450 aa3.41□□□□□ -1.86
RNU6-546P-201ENST00000383991 KIAA0825Q8IV33 1275 aa3.41□□□□□ -1.86
RNU6-546P-201ENST00000383991 ZKSCAN3Q9BRR0 538 aa3.41□□□□□ -1.86
RNU6-546P-201ENST00000383991 TRIM56Q9BRZ2 755 aaKnown RBP3.41□□□□□ -1.86
RNU6-546P-201ENST00000383991 ZFYVE1Q9HBF4 777 aa3.41□□□□□ -1.86
RNU6-546P-201ENST00000383991 STRN4Q9NRL3 753 aa3.41□□□□□ -1.86
RNU6-546P-201ENST00000383991 NDFIP2Q9NV92 336 aa3.41□□□□□ -1.86
RNU6-546P-201ENST00000383991 PDZRN3Q9UPQ7 1066 aa3.41□□□□□ -1.86
RNU6-546P-201ENST00000383991 AKAP2Q9Y2D5 859 aa3.41□□□□□ -1.86
RNU6-546P-201ENST00000383991 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.41□□□□□ -1.86
RNU6-546P-201ENST00000383991 SLC35F4A4IF30 521 aa3.4□□□□□ -1.87
RNU6-546P-201ENST00000383991 MINDY4BA8MYZ0 360 aa3.4□□□□□ -1.87
RNU6-546P-201ENST00000383991 KHNYNO15037 678 aaKnown RBP3.4□□□□□ -1.87
RNU6-546P-201ENST00000383991 GREM1O60565 184 aa3.4□□□□□ -1.87
RNU6-546P-201ENST00000383991 DGAT1O75907 488 aa3.4□□□□□ -1.87
RNU6-546P-201ENST00000383991 PSAPP07602 524 aa3.4□□□□□ -1.87
RNU6-546P-201ENST00000383991 MAPTP10636 758 aaKnown RBP3.4□□□□□ -1.87
RNU6-546P-201ENST00000383991 NFKB1P19838 968 aa3.4□□□□□ -1.87
RNU6-546P-201ENST00000383991 GARTP22102 1010 aa3.4□□□□□ -1.87
RNU6-546P-201ENST00000383991 ITPKAP23677 461 aa3.4□□□□□ -1.87
RNU6-546P-201ENST00000383991 GBP2P32456 591 aaPredicted RBP3.4□□□□□ -1.87
RNU6-546P-201ENST00000383991 PLAURQ03405 335 aa3.4□□□□□ -1.87
RNU6-546P-201ENST00000383991 GRIN2CQ14957 1233 aa3.4□□□□□ -1.87
RNU6-546P-201ENST00000383991 NBPF6Q5VWK0 638 aa3.4□□□□□ -1.87
RNU6-546P-201ENST00000383991 NCAPG2Q86XI2 1143 aa3.4□□□□□ -1.87
RNU6-546P-201ENST00000383991 CRIPAKQ8N1N5 446 aa3.4□□□□□ -1.87
RNU6-546P-201ENST00000383991 CEP120Q8N960 986 aa3.4□□□□□ -1.87
RNU6-546P-201ENST00000383991 PHC3Q8NDX5 983 aa3.4□□□□□ -1.87
RNU6-546P-201ENST00000383991 ZNF296Q8WUU4 475 aaPredicted RBP3.4□□□□□ -1.87
RNU6-546P-201ENST00000383991 EAF1Q96JC9 268 aaPredicted RBP3.4□□□□□ -1.87
RNU6-546P-201ENST00000383991 RHOVQ96L33 236 aa3.4□□□□□ -1.87
RNU6-546P-201ENST00000383991 NBPF4Q96M43 638 aa3.4□□□□□ -1.87
RNU6-546P-201ENST00000383991 OSMRQ99650 979 aa3.4□□□□□ -1.87
RNU6-546P-201ENST00000383991 NT5C1AQ9BXI3 368 aa3.4□□□□□ -1.87
RNU6-546P-201ENST00000383991 CEP44Q9C0F1 390 aa3.4□□□□□ -1.87
RNU6-546P-201ENST00000383991 NUCKS1Q9H1E3 243 aaKnown RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms