RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 NEK4P51957 841 aa16.34■□□□□ 0.21
SEC13-203ENST00000383801 NMIQ13287 307 aaPredicted RBP16.34■□□□□ 0.21
SEC13-203ENST00000383801 NECTIN1Q15223 517 aa16.34■□□□□ 0.21
SEC13-203ENST00000383801 NFKBIBQ15653 356 aa16.34■□□□□ 0.21
SEC13-203ENST00000383801 ATP2B3Q16720 1220 aa16.34■□□□□ 0.21
SEC13-203ENST00000383801 TSGA10IPQ3SY00 556 aa16.34■□□□□ 0.21
SEC13-203ENST00000383801 MCMDC2Q4G0Z9 681 aa16.34■□□□□ 0.21
SEC13-203ENST00000383801 VGLL2Q8N8G2 317 aa16.34■□□□□ 0.21
SEC13-203ENST00000383801 IL25Q9H293 177 aa16.34■□□□□ 0.21
SEC13-203ENST00000383801 SLKQ9H2G2 1235 aaPredicted RBP16.34■□□□□ 0.21
SEC13-203ENST00000383801 HMG20BQ9P0W2 317 aa16.34■□□□□ 0.21
SEC13-203ENST00000383801 DDX60Q8IY21 1712 aaKnown RBP16.34■□□□□ 0.21
SEC13-203ENST00000383801 IGHMBP2P38935 993 aaKnown RBP16.33■□□□□ 0.2
SEC13-203ENST00000383801 TTC39AQ5SRH9 613 aa16.33■□□□□ 0.2
SEC13-203ENST00000383801 LPIN2Q92539 896 aa16.33■□□□□ 0.2
SEC13-203ENST00000383801 CDC5LQ99459 802 aaKnown RBP16.33■□□□□ 0.2
SEC13-203ENST00000383801 MPHOSPH8Q99549 860 aa16.33■□□□□ 0.2
SEC13-203ENST00000383801 CD2BP2O95400 341 aaKnown RBP16.32■□□□□ 0.2
SEC13-203ENST00000383801 UQCRFS1P1P0C7P4 283 aa16.32■□□□□ 0.2
SEC13-203ENST00000383801 PSMA5P28066 241 aa16.32■□□□□ 0.2
SEC13-203ENST00000383801 TTF1Q15361 905 aaPredicted RBP16.32■□□□□ 0.2
SEC13-203ENST00000383801 PUM3Q15397 648 aaKnown RBP16.32■□□□□ 0.2
SEC13-203ENST00000383801 USPL1Q5W0Q7 1092 aa16.32■□□□□ 0.2
SEC13-203ENST00000383801 KRT27Q7Z3Y8 459 aa16.32■□□□□ 0.2
SEC13-203ENST00000383801 INTS4Q96HW7 963 aaKnown RBP16.32■□□□□ 0.2
SEC13-203ENST00000383801 SETDB2Q96T68 719 aa16.32■□□□□ 0.2
SEC13-203ENST00000383801 SNX14Q9Y5W7 946 aa16.32■□□□□ 0.2
SEC13-203ENST00000383801 RIC1Q4ADV7 1423 aa16.32■□□□□ 0.2
SEC13-203ENST00000383801 GNPATO15228 680 aa16.31■□□□□ 0.2
SEC13-203ENST00000383801 C4BP0C0L5 1744 aa16.31■□□□□ 0.2
SEC13-203ENST00000383801 RBM6P78332 1123 aaKnown RBP16.31■□□□□ 0.2
SEC13-203ENST00000383801 TRAPPC3LQ5T215 181 aa16.31■□□□□ 0.2
SEC13-203ENST00000383801 ZSCAN25Q6NSZ9 544 aa16.31■□□□□ 0.2
SEC13-203ENST00000383801 TPTE2Q6XPS3 522 aa16.31■□□□□ 0.2
SEC13-203ENST00000383801 FAM227BQ96M60 508 aa16.31■□□□□ 0.2
SEC13-203ENST00000383801 DNAJC2Q99543 621 aaKnown RBP16.31■□□□□ 0.2
SEC13-203ENST00000383801 HCLS1P14317 486 aaPredicted RBP16.3■□□□□ 0.2
SEC13-203ENST00000383801 FGFR2P21802 821 aa16.3■□□□□ 0.2
SEC13-203ENST00000383801 KRT32Q14532 448 aa16.3■□□□□ 0.2
SEC13-203ENST00000383801 PTF1AQ7RTS3 328 aa16.3■□□□□ 0.2
SEC13-203ENST00000383801 PALD1Q9ULE6 856 aa16.3■□□□□ 0.2
SEC13-203ENST00000383801 COL24A1Q17RW2 1714 aa16.3■□□□□ 0.2
SEC13-203ENST00000383801 A0A0D9SFI3 127 aa16.29■□□□□ 0.2
SEC13-203ENST00000383801 TAF5LO75529 589 aa16.29■□□□□ 0.2
SEC13-203ENST00000383801 NUCB2P80303 420 aa16.29■□□□□ 0.2
SEC13-203ENST00000383801 CUL4AQ13619 759 aa16.29■□□□□ 0.2
SEC13-203ENST00000383801 ARHGEF1Q92888 912 aaKnown RBP16.29■□□□□ 0.2
SEC13-203ENST00000383801 CCDC85AQ96PX6 553 aaPredicted RBP16.29■□□□□ 0.2
SEC13-203ENST00000383801 ALDH8A1Q9H2A2 487 aaPredicted RBP16.29■□□□□ 0.2
SEC13-203ENST00000383801 BCL2L12Q9HB09 334 aa16.29■□□□□ 0.2
SEC13-203ENST00000383801 U3KPZ7 1027 aaPredicted RBP16.29■□□□□ 0.2
SEC13-203ENST00000383801 ARAP2Q8WZ64 1704 aa16.29■□□□□ 0.2
SEC13-203ENST00000383801 GOLIM4O00461 696 aa16.29■□□□□ 0.2
SEC13-203ENST00000383801 ZBTB22O15209 634 aa16.29■□□□□ 0.2
SEC13-203ENST00000383801 RNF113AO15541 343 aaKnown RBP16.29■□□□□ 0.2
SEC13-203ENST00000383801 SLC5A1P13866 664 aa16.29■□□□□ 0.2
SEC13-203ENST00000383801 GTF2E1P29083 439 aaPredicted RBP16.29■□□□□ 0.2
SEC13-203ENST00000383801 ARID4AP29374 1257 aaPredicted RBP16.29■□□□□ 0.2
SEC13-203ENST00000383801 RFC4P35249 363 aa16.29■□□□□ 0.2
SEC13-203ENST00000383801 PTH1RQ03431 593 aa16.29■□□□□ 0.2
SEC13-203ENST00000383801 ZMYM1Q5SVZ6 1142 aa16.29■□□□□ 0.2
SEC13-203ENST00000383801 NLRP3Q96P20 1036 aa16.29■□□□□ 0.2
SEC13-203ENST00000383801 DSCC1Q9BVC3 393 aa16.29■□□□□ 0.2
SEC13-203ENST00000383801 ZSWIM6Q9HCJ5 1215 aa16.29■□□□□ 0.2
SEC13-203ENST00000383801 RBM8AQ9Y5S9 174 aaKnown RBP16.29■□□□□ 0.2
SEC13-203ENST00000383801 KCNJ4P48050 445 aa16.28■□□□□ 0.2
SEC13-203ENST00000383801 NBR1Q14596 966 aa16.28■□□□□ 0.2
SEC13-203ENST00000383801 VPS53Q5VIR6 699 aa16.28■□□□□ 0.2
SEC13-203ENST00000383801 TBC1D9BQ66K14 1250 aa16.28■□□□□ 0.2
SEC13-203ENST00000383801 DDX46Q7L014 1031 aaKnown RBP16.28■□□□□ 0.2
SEC13-203ENST00000383801 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.28■□□□□ 0.24e-8■□□□□ 10.1
SEC13-203ENST00000383801 BSDC1Q9NW68 430 aaPredicted RBP16.28■□□□□ 0.2
SEC13-203ENST00000383801 PTMSP20962 102 aa16.27■□□□□ 0.19
SEC13-203ENST00000383801 CREB3L3Q68CJ9 461 aa16.27■□□□□ 0.19
SEC13-203ENST00000383801 ANKRD18AQ8IVF6 992 aa16.27■□□□□ 0.19
SEC13-203ENST00000383801 TTC14Q96N46 770 aa16.27■□□□□ 0.19
SEC13-203ENST00000383801 PDIA4P13667 645 aaKnown RBP16.26■□□□□ 0.19
SEC13-203ENST00000383801 RAB3GAP1Q15042 981 aa16.26■□□□□ 0.19
SEC13-203ENST00000383801 ERFEQ4G0M1 354 aa16.26■□□□□ 0.19
SEC13-203ENST00000383801 PRPF40BQ6NWY9 871 aaKnown RBP16.26■□□□□ 0.19
SEC13-203ENST00000383801 CLEC17AQ6ZS10 378 aa16.26■□□□□ 0.19
SEC13-203ENST00000383801 RASEFQ8IZ41 740 aa16.26■□□□□ 0.19
SEC13-203ENST00000383801 EDC3Q96F86 508 aaKnown RBP16.26■□□□□ 0.19
SEC13-203ENST00000383801 TMX3Q96JJ7 454 aa16.26■□□□□ 0.19
SEC13-203ENST00000383801 ZSCAN31Q96LW9 406 aaPredicted RBP16.26■□□□□ 0.19
SEC13-203ENST00000383801 CYP46A1Q9Y6A2 500 aa16.26■□□□□ 0.19
SEC13-203ENST00000383801 FAM177BA6PVY3 158 aa16.25■□□□□ 0.19
SEC13-203ENST00000383801 SLC27A2O14975 620 aa16.25■□□□□ 0.19
SEC13-203ENST00000383801 PLSCR1O15162 318 aa16.25■□□□□ 0.19
SEC13-203ENST00000383801 ADORA1P30542 326 aa16.25■□□□□ 0.19
SEC13-203ENST00000383801 FKBP4Q02790 459 aaKnown RBP eCLIP16.25■□□□□ 0.19
SEC13-203ENST00000383801 UBE4AQ14139 1066 aa16.25■□□□□ 0.19
SEC13-203ENST00000383801 ANKRD1Q15327 319 aa16.25■□□□□ 0.19
SEC13-203ENST00000383801 FAM182BQ5T319 152 aa16.25■□□□□ 0.19
SEC13-203ENST00000383801 CCDC102BQ68D86 513 aa16.25■□□□□ 0.19
SEC13-203ENST00000383801 RUFY3Q7L099 469 aa16.25■□□□□ 0.19
SEC13-203ENST00000383801 NBPF5PQ86XG9 351 aaPredicted RBP16.25■□□□□ 0.19
SEC13-203ENST00000383801 SPRYD3Q8NCJ5 442 aa16.25■□□□□ 0.19
SEC13-203ENST00000383801 BRWD3Q6RI45 1802 aa16.24■□□□□ 0.19
SEC13-203ENST00000383801 IGSF3O75054 1194 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms