RNA–Protein interactions for RNA: ENST00000381535.4

SYNGR1-204, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-204ENST00000381535 SYT17Q9BSW7 474 aa17.7■□□□□ 0.42
SYNGR1-204ENST00000381535 C22orf23Q9BZE7 217 aa17.7■□□□□ 0.42
SYNGR1-204ENST00000381535 BOLA2Q9H3K6 86 aa17.7■□□□□ 0.42
SYNGR1-204ENST00000381535 UTRNP46939 3433 aa17.7■□□□□ 0.42
SYNGR1-204ENST00000381535 RTL9Q8NET4 1388 aa17.69■□□□□ 0.42
SYNGR1-204ENST00000381535 SCN7AQ01118 1682 aa17.69■□□□□ 0.42
SYNGR1-204ENST00000381535 CHMLP26374 656 aa17.69■□□□□ 0.42
SYNGR1-204ENST00000381535 IGHMBP2P38935 993 aaKnown RBP17.69■□□□□ 0.42
SYNGR1-204ENST00000381535 TBC1D32Q96NH3 1257 aa17.69■□□□□ 0.42
SYNGR1-204ENST00000381535 MPHOSPH8Q99549 860 aa17.69■□□□□ 0.42
SYNGR1-204ENST00000381535 FHDC1Q9C0D6 1143 aaPredicted RBP17.69■□□□□ 0.42
SYNGR1-204ENST00000381535 A0A1B0GUL7 405 aa17.68■□□□□ 0.42
SYNGR1-204ENST00000381535 TM4SF1P30408 202 aa17.68■□□□□ 0.42
SYNGR1-204ENST00000381535 C3orf67Q6ZVT6 689 aa17.68■□□□□ 0.42
SYNGR1-204ENST00000381535 FLAD1Q8NFF5 587 aa17.68■□□□□ 0.42
SYNGR1-204ENST00000381535 EVI5LQ96CN4 794 aa17.68■□□□□ 0.42
SYNGR1-204ENST00000381535 MYH3P11055 1940 aa17.68■□□□□ 0.42
SYNGR1-204ENST00000381535 NPHP1O15259 732 aa17.67■□□□□ 0.42
SYNGR1-204ENST00000381535 CCDC24Q8N4L8 307 aa17.67■□□□□ 0.42
SYNGR1-204ENST00000381535 IPO9Q96P70 1041 aaKnown RBP17.67■□□□□ 0.42
SYNGR1-204ENST00000381535 CDC5LQ99459 802 aaKnown RBP17.67■□□□□ 0.42
SYNGR1-204ENST00000381535 MROH5Q6ZUA9 1318 aa17.67■□□□□ 0.42
SYNGR1-204ENST00000381535 UBR3Q6ZT12 1888 aa17.67■□□□□ 0.42
SYNGR1-204ENST00000381535 DCAF8L1A6NGE4 600 aa17.66■□□□□ 0.42
SYNGR1-204ENST00000381535 COL23A1Q86Y22 540 aaPredicted RBP17.66■□□□□ 0.42
SYNGR1-204ENST00000381535 XAGE2Q96GT9 111 aa17.66■□□□□ 0.42
SYNGR1-204ENST00000381535 DDRGK1Q96HY6 314 aa17.66■□□□□ 0.42
SYNGR1-204ENST00000381535 CARMIL3Q8ND23 1372 aa17.66■□□□□ 0.42
SYNGR1-204ENST00000381535 PDE8BO95263 885 aa17.65■□□□□ 0.42
SYNGR1-204ENST00000381535 SERPINB2P05120 415 aa17.65■□□□□ 0.42
SYNGR1-204ENST00000381535 ATP2B3Q16720 1220 aa17.65■□□□□ 0.42
SYNGR1-204ENST00000381535 CCDC158Q5M9N0 1113 aa17.65■□□□□ 0.42
SYNGR1-204ENST00000381535 GORABQ5T7V8 394 aa17.65■□□□□ 0.42
SYNGR1-204ENST00000381535 ANKRD18AQ8IVF6 992 aa17.65■□□□□ 0.42
SYNGR1-204ENST00000381535 ESYT1Q9BSJ8 1104 aa17.65■□□□□ 0.42
SYNGR1-204ENST00000381535 ABCC12Q96J65 1359 aa17.65■□□□□ 0.42
SYNGR1-204ENST00000381535 DDX60Q8IY21 1712 aaKnown RBP17.64■□□□□ 0.41
SYNGR1-204ENST00000381535 REC8O95072 547 aa17.64■□□□□ 0.41
SYNGR1-204ENST00000381535 VGLL2Q8N8G2 317 aa17.64■□□□□ 0.41
SYNGR1-204ENST00000381535 CNBD1Q8NA66 436 aa17.64■□□□□ 0.41
SYNGR1-204ENST00000381535 HELBQ8NG08 1087 aaPredicted RBP17.64■□□□□ 0.41
SYNGR1-204ENST00000381535 HAUS7Q99871 368 aa17.64■□□□□ 0.41
SYNGR1-204ENST00000381535 USP26Q9BXU7 913 aa17.64■□□□□ 0.41
SYNGR1-204ENST00000381535 C4AP0C0L4 1744 aa17.64■□□□□ 0.41
SYNGR1-204ENST00000381535 ADORA1P30542 326 aa17.63■□□□□ 0.41
SYNGR1-204ENST00000381535 RBM25P49756 843 aaKnown RBP17.63■□□□□ 0.41
SYNGR1-204ENST00000381535 NLGN1Q8N2Q7 840 aa17.63■□□□□ 0.41
SYNGR1-204ENST00000381535 ZNF609O15014 1411 aa17.63■□□□□ 0.41
SYNGR1-204ENST00000381535 IFIT1P09914 478 aaKnown RBP17.62■□□□□ 0.41
SYNGR1-204ENST00000381535 POLD1P28340 1107 aa17.62■□□□□ 0.41
SYNGR1-204ENST00000381535 RPS8P62241 208 aaKnown RBP17.62■□□□□ 0.41
SYNGR1-204ENST00000381535 TTC39AQ5SRH9 613 aa17.62■□□□□ 0.41
SYNGR1-204ENST00000381535 PRR5LQ6MZQ0 368 aa17.62■□□□□ 0.41
SYNGR1-204ENST00000381535 DDX46Q7L014 1031 aaKnown RBP17.62■□□□□ 0.41
SYNGR1-204ENST00000381535 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.62■□□□□ 0.41
SYNGR1-204ENST00000381535 BSDC1Q9NW68 430 aaPredicted RBP17.62■□□□□ 0.41
SYNGR1-204ENST00000381535 TUBGCP6Q96RT7 1819 aa17.61■□□□□ 0.41
SYNGR1-204ENST00000381535 HIP1O00291 1037 aa17.61■□□□□ 0.41
SYNGR1-204ENST00000381535 FGFR2P21802 821 aa17.61■□□□□ 0.41
SYNGR1-204ENST00000381535 ST5P78524 1137 aa17.61■□□□□ 0.41
SYNGR1-204ENST00000381535 PUM3Q15397 648 aaKnown RBP17.61■□□□□ 0.41
SYNGR1-204ENST00000381535 RUFY2Q8WXA3 655 aa17.61■□□□□ 0.41
SYNGR1-204ENST00000381535 LPIN2Q92539 896 aa17.61■□□□□ 0.41
SYNGR1-204ENST00000381535 DNAJC2Q99543 621 aaKnown RBP17.61■□□□□ 0.41
SYNGR1-204ENST00000381535 FSD1Q9BTV5 496 aa17.61■□□□□ 0.41
SYNGR1-204ENST00000381535 DIAPH3Q9NSV4 1193 aa17.61■□□□□ 0.41
SYNGR1-204ENST00000381535 RIC1Q4ADV7 1423 aa17.61■□□□□ 0.41
SYNGR1-204ENST00000381535 COL24A1Q17RW2 1714 aa17.61■□□□□ 0.41
SYNGR1-204ENST00000381535 LAMB2P55268 1798 aa17.61■□□□□ 0.41
SYNGR1-204ENST00000381535 POLRMTO00411 1230 aaKnown RBP17.6■□□□□ 0.41
SYNGR1-204ENST00000381535 TAF5LO75529 589 aa17.6■□□□□ 0.41
SYNGR1-204ENST00000381535 SLC5A1P13866 664 aa17.6■□□□□ 0.41
SYNGR1-204ENST00000381535 YY1P25490 414 aa17.6■□□□□ 0.41
SYNGR1-204ENST00000381535 CHRNDQ07001 517 aa17.6■□□□□ 0.41
SYNGR1-204ENST00000381535 DDR1Q08345 913 aa17.6■□□□□ 0.41
SYNGR1-204ENST00000381535 CELF1Q92879 486 aaKnown RBP17.6■□□□□ 0.41
SYNGR1-204ENST00000381535 GOLGB1Q14789 3259 aaKnown RBP17.6■□□□□ 0.41
SYNGR1-204ENST00000381535 CWC27Q6UX04 472 aaKnown RBP17.59■□□□□ 0.41
SYNGR1-204ENST00000381535 EDC3Q96F86 508 aaKnown RBP17.59■□□□□ 0.41
SYNGR1-204ENST00000381535 MINPP1Q9UNW1 487 aa17.59■□□□□ 0.41
SYNGR1-204ENST00000381535 SGSM2O43147 1006 aa17.58■□□□□ 0.4
SYNGR1-204ENST00000381535 PAG1Q9NWQ8 432 aa17.58■□□□□ 0.4
SYNGR1-204ENST00000381535 NDUFB9Q9Y6M9 179 aa17.58■□□□□ 0.4
SYNGR1-204ENST00000381535 GOLIM4O00461 696 aa17.57■□□□□ 0.4
SYNGR1-204ENST00000381535 KIAA1211Q6ZU35 1233 aa17.57■□□□□ 0.4
SYNGR1-204ENST00000381535 ZNF512BQ96KM6 892 aaPredicted RBP17.57■□□□□ 0.4
SYNGR1-204ENST00000381535 ANO2Q9NQ90 1003 aa17.57■□□□□ 0.4
SYNGR1-204ENST00000381535 SNAP23O00161 211 aa17.56■□□□□ 0.4
SYNGR1-204ENST00000381535 EPB41L2O43491 1005 aaKnown RBP17.56■□□□□ 0.4
SYNGR1-204ENST00000381535 UQCRFS1P1P0C7P4 283 aa17.56■□□□□ 0.4
SYNGR1-204ENST00000381535 FKBP4Q02790 459 aaKnown RBP eCLIP17.56■□□□□ 0.4
SYNGR1-204ENST00000381535 NMIQ13287 307 aaPredicted RBP17.56■□□□□ 0.4
SYNGR1-204ENST00000381535 TICAM2Q86XR7 235 aa17.56■□□□□ 0.4
SYNGR1-204ENST00000381535 KBTBD3Q8NAB2 608 aa17.56■□□□□ 0.4
SYNGR1-204ENST00000381535 SNRKQ9NRH2 765 aa17.56■□□□□ 0.4
SYNGR1-204ENST00000381535 AK9Q5TCS8 1911 aa17.55■□□□□ 0.4
SYNGR1-204ENST00000381535 GRAPQ13588 217 aa17.55■□□□□ 0.4
SYNGR1-204ENST00000381535 UBE4AQ14139 1066 aa17.55■□□□□ 0.4
SYNGR1-204ENST00000381535 CCDC102BQ68D86 513 aa17.55■□□□□ 0.4
SYNGR1-204ENST00000381535 GRAPLQ8TC17 118 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms