RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 BICD1Q96G01 975 aa8.21□□□□□ -1.1
CCDC171-201ENST00000380701 EXOC1Q9NV70 894 aa8.21□□□□□ -1.1
CCDC171-201ENST00000380701 ARHGEF12Q9NZN5 1544 aa8.21□□□□□ -1.1
CCDC171-201ENST00000380701 ATL3Q6DD88 541 aa8.2□□□□□ -1.1
CCDC171-201ENST00000380701 STX8Q9UNK0 236 aa8.2□□□□□ -1.1
CCDC171-201ENST00000380701 SLC4A4Q9Y6R1 1079 aa8.2□□□□□ -1.1
CCDC171-201ENST00000380701 ALDH1B1P30837 517 aa8.2□□□□□ -1.1
CCDC171-201ENST00000380701 MAP3K9P80192 1104 aa8.2□□□□□ -1.1
CCDC171-201ENST00000380701 WDR66Q8TBY9 1149 aa8.2□□□□□ -1.1
CCDC171-201ENST00000380701 ARHGEF10LQ9HCE6 1279 aa8.2□□□□□ -1.1
CCDC171-201ENST00000380701 HOMER2Q9NSB8 354 aa8.2□□□□□ -1.1
CCDC171-201ENST00000380701 ZNF219Q9P2Y4 722 aaPredicted RBP8.2□□□□□ -1.1
CCDC171-201ENST00000380701 SBNO1A3KN83 1393 aa8.2□□□□□ -1.1
CCDC171-201ENST00000380701 SH3TC1Q8TE82 1336 aa8.2□□□□□ -1.1
CCDC171-201ENST00000380701 TRAPPC8Q9Y2L5 1435 aa8.2□□□□□ -1.1
CCDC171-201ENST00000380701 STX1AQ16623 288 aa8.2□□□□□ -1.1
CCDC171-201ENST00000380701 CKAP2LQ8IYA6 745 aa8.2□□□□□ -1.1
CCDC171-201ENST00000380701 THUMPD2Q9BTF0 503 aaKnown RBP8.2□□□□□ -1.1
CCDC171-201ENST00000380701 ABCC1P33527 1531 aa8.2□□□□□ -1.1
CCDC171-201ENST00000380701 TNFAIP1Q13829 316 aa8.2□□□□□ -1.1
CCDC171-201ENST00000380701 SMC1AQ14683 1233 aaKnown RBP8.2□□□□□ -1.1
CCDC171-201ENST00000380701 DDX21Q9NR30 783 aaKnown RBP eCLIP8.2□□□□□ -1.1
CCDC171-201ENST00000380701 PICK1Q9NRD5 415 aa8.2□□□□□ -1.1
CCDC171-201ENST00000380701 CCNL1Q9UK58 526 aaPredicted RBP8.2□□□□□ -1.1
CCDC171-201ENST00000380701 IRS4O14654 1257 aaPredicted RBP8.2□□□□□ -1.1
CCDC171-201ENST00000380701 LRSAM1Q6UWE0 723 aa8.2□□□□□ -1.1
CCDC171-201ENST00000380701 ERBB4Q15303 1308 aa8.2□□□□□ -1.1
CCDC171-201ENST00000380701 ADAMTS12P58397 1594 aa8.2□□□□□ -1.1
CCDC171-201ENST00000380701 IDEP14735 1019 aa8.2□□□□□ -1.1
CCDC171-201ENST00000380701 TUBB4BP68371 445 aa8.2□□□□□ -1.1
CCDC171-201ENST00000380701 LUZP1Q86V48 1076 aa8.2□□□□□ -1.1
CCDC171-201ENST00000380701 KIAA1524Q8TCG1 905 aa8.2□□□□□ -1.1
CCDC171-201ENST00000380701 CRACR2AQ9BSW2 395 aa8.2□□□□□ -1.1
CCDC171-201ENST00000380701 NUP153P49790 1475 aaKnown RBP8.19□□□□□ -1.1
CCDC171-201ENST00000380701 HS2ST1Q7LGA3 356 aa8.19□□□□□ -1.1
CCDC171-201ENST00000380701 ANKRD44Q8N8A2 993 aa8.19□□□□□ -1.1
CCDC171-201ENST00000380701 SYCP2Q9BX26 1530 aa8.19□□□□□ -1.1
CCDC171-201ENST00000380701 ATP5J2-PTCD1G3V325 749 aa8.19□□□□□ -1.1
CCDC171-201ENST00000380701 TRIM27P14373 513 aa8.19□□□□□ -1.1
CCDC171-201ENST00000380701 KRT79Q5XKE5 535 aa8.19□□□□□ -1.1
CCDC171-201ENST00000380701 LMBR1LQ6UX01 489 aa8.19□□□□□ -1.1
CCDC171-201ENST00000380701 TMC4Q7Z404 712 aa8.19□□□□□ -1.1
CCDC171-201ENST00000380701 VTI1AQ96AJ9 217 aa8.19□□□□□ -1.1
CCDC171-201ENST00000380701 TCOF1Q13428 1488 aaKnown RBP8.19□□□□□ -1.1
CCDC171-201ENST00000380701 NPC1L1Q9UHC9 1359 aa8.19□□□□□ -1.1
CCDC171-201ENST00000380701 GSTTP1A0A1W2PQM5 241 aa8.19□□□□□ -1.1
CCDC171-201ENST00000380701 H0YIN7 160 aa8.19□□□□□ -1.1
CCDC171-201ENST00000380701 EDC4Q6P2E9 1401 aaKnown RBP8.19□□□□□ -1.1
CCDC171-201ENST00000380701 PABPC4Q13310 644 aaKnown RBP eCLIP8.19□□□□□ -1.1
CCDC171-201ENST00000380701 LMBR1Q8WVP7 490 aa8.19□□□□□ -1.1
CCDC171-201ENST00000380701 F6X3S4 739 aa8.19□□□□□ -1.1
CCDC171-201ENST00000380701 PSMA7O14818 248 aa8.19□□□□□ -1.1
CCDC171-201ENST00000380701 UVSSAQ2YD98 709 aa8.19□□□□□ -1.1
CCDC171-201ENST00000380701 TDRD12Q587J7 1177 aaKnown RBP8.19□□□□□ -1.1
CCDC171-201ENST00000380701 TTC22Q5TAA0 569 aa8.19□□□□□ -1.1
CCDC171-201ENST00000380701 UBXN4Q92575 508 aa8.19□□□□□ -1.1
CCDC171-201ENST00000380701 LZTS2Q9BRK4 669 aa8.19□□□□□ -1.1
CCDC171-201ENST00000380701 IVNS1ABPQ9Y6Y0 642 aa8.19□□□□□ -1.1
CCDC171-201ENST00000380701 RTL1A6NKG5 1358 aa8.18□□□□□ -1.1
CCDC171-201ENST00000380701 RNF113AO15541 343 aaKnown RBP8.18□□□□□ -1.1
CCDC171-201ENST00000380701 CALRP27797 417 aaKnown RBP8.18□□□□□ -1.1
CCDC171-201ENST00000380701 CHMP4BP1P59074 171 aa8.18□□□□□ -1.1
CCDC171-201ENST00000380701 PLBD2Q8NHP8 589 aa8.18□□□□□ -1.1
CCDC171-201ENST00000380701 KIAA0556O60303 1618 aa8.18□□□□□ -1.1
CCDC171-201ENST00000380701 BICDL2A1A5D9 508 aa8.18□□□□□ -1.1
CCDC171-201ENST00000380701 MCM4P33991 863 aa8.18□□□□□ -1.1
CCDC171-201ENST00000380701 TCIRG1Q13488 830 aa8.18□□□□□ -1.1
CCDC171-201ENST00000380701 HAUS2Q9NVX0 235 aa8.18□□□□□ -1.1
CCDC171-201ENST00000380701 CFAP74Q9C0B2 1584 aa8.18□□□□□ -1.1
CCDC171-201ENST00000380701 EIF4A2Q14240 407 aaKnown RBP8.18□□□□□ -1.1
CCDC171-201ENST00000380701 FSIP1Q8NA03 581 aa8.18□□□□□ -1.1
CCDC171-201ENST00000380701 GGA1Q9UJY5 639 aa8.18□□□□□ -1.1
CCDC171-201ENST00000380701 CEP83Q9Y592 693 aa8.18□□□□□ -1.1
CCDC171-201ENST00000380701 YEATS2Q9ULM3 1422 aa8.18□□□□□ -1.1
CCDC171-201ENST00000380701 PRC1O43663 620 aa8.18□□□□□ -1.1
CCDC171-201ENST00000380701 PHACTR2O75167 634 aa8.18□□□□□ -1.1
CCDC171-201ENST00000380701 NAPAP54920 295 aa8.18□□□□□ -1.1
CCDC171-201ENST00000380701 TCERG1LQ5VWI1 586 aa8.18□□□□□ -1.1
CCDC171-201ENST00000380701 ARID3AQ99856 593 aa8.18□□□□□ -1.1
CCDC171-201ENST00000380701 CHPF2Q9P2E5 772 aa8.18□□□□□ -1.1
CCDC171-201ENST00000380701 NSFL1CQ9UNZ2 370 aaKnown RBP8.18□□□□□ -1.1
CCDC171-201ENST00000380701 RPL13P26373 211 aaKnown RBP8.18□□□□□ -1.1
CCDC171-201ENST00000380701 SLC26A6Q9BXS9 759 aa8.18□□□□□ -1.1
CCDC171-201ENST00000380701 PRAG1Q86YV5 1406 aa8.18□□□□□ -1.1
CCDC171-201ENST00000380701 GNPATO15228 680 aa8.17□□□□□ -1.1
CCDC171-201ENST00000380701 RNMTO43148 476 aaKnown RBP8.17□□□□□ -1.1
CCDC171-201ENST00000380701 MYCNP04198 464 aaPredicted RBP8.17□□□□□ -1.1
CCDC171-201ENST00000380701 VEZTQ9HBM0 779 aa8.17□□□□□ -1.1
CCDC171-201ENST00000380701 FBXO3Q9UK99 471 aa8.17□□□□□ -1.1
CCDC171-201ENST00000380701 FERP16591 822 aa8.17□□□□□ -1.1
CCDC171-201ENST00000380701 SLC9C2Q5TAH2 1124 aa8.17□□□□□ -1.1
CCDC171-201ENST00000380701 HACE1Q8IYU2 909 aa8.17□□□□□ -1.1
CCDC171-201ENST00000380701 PPM1EQ8WY54 764 aa8.17□□□□□ -1.1
CCDC171-201ENST00000380701 HELLSQ9NRZ9 838 aa8.17□□□□□ -1.1
CCDC171-201ENST00000380701 TRIM75PA6NK02 468 aa8.17□□□□□ -1.1
CCDC171-201ENST00000380701 ERVV-2B6SEH9 535 aa8.17□□□□□ -1.1
CCDC171-201ENST00000380701 ZNF772Q68DY9 489 aaPredicted RBP8.17□□□□□ -1.1
CCDC171-201ENST00000380701 TAX1BP1Q86VP1 789 aa8.17□□□□□ -1.1
CCDC171-201ENST00000380701 MICU3Q86XE3 530 aa8.17□□□□□ -1.1
CCDC171-201ENST00000380701 NUP88Q99567 741 aaPredicted RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms