RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 SLC9C2Q5TAH2 1124 aa18.34■□□□□ 0.53
COL2A1-202ENST00000380518 NBPF6Q5VWK0 638 aa18.34■□□□□ 0.53
COL2A1-202ENST00000380518 NBPF5PQ86XG9 351 aaPredicted RBP18.34■□□□□ 0.53
COL2A1-202ENST00000380518 NBPF4Q96M43 638 aa18.34■□□□□ 0.53
COL2A1-202ENST00000380518 ZSWIM4Q9H7M6 989 aa18.34■□□□□ 0.53
COL2A1-202ENST00000380518 VAMP4O75379 141 aa18.34■□□□□ 0.53
COL2A1-202ENST00000380518 TRAF1Q13077 416 aa18.34■□□□□ 0.53
COL2A1-202ENST00000380518 SPAG5Q96R06 1193 aa18.34■□□□□ 0.53
COL2A1-202ENST00000380518 STAT6P42226 847 aa18.34■□□□□ 0.53
COL2A1-202ENST00000380518 PPIP5K1Q6PFW1 1433 aa18.34■□□□□ 0.53
COL2A1-202ENST00000380518 CLCN1P35523 988 aa18.33■□□□□ 0.53
COL2A1-202ENST00000380518 CKAP4Q07065 602 aaKnown RBP18.33■□□□□ 0.53
COL2A1-202ENST00000380518 RNF187Q5TA31 235 aaPredicted RBP18.33■□□□□ 0.53
COL2A1-202ENST00000380518 ZGPATQ8N5A5 531 aaKnown RBP18.33■□□□□ 0.53
COL2A1-202ENST00000380518 PRAG1Q86YV5 1406 aa18.33■□□□□ 0.53
COL2A1-202ENST00000380518 TSPY3P0CV98 308 aa18.33■□□□□ 0.53
COL2A1-202ENST00000380518 TSPY8P0CW00 308 aa18.33■□□□□ 0.53
COL2A1-202ENST00000380518 GTF2F1P35269 517 aaKnown RBP eCLIP18.33■□□□□ 0.53
COL2A1-202ENST00000380518 NMIQ13287 307 aaPredicted RBP18.33■□□□□ 0.53
COL2A1-202ENST00000380518 SLC39A6Q13433 755 aa18.33■□□□□ 0.53
COL2A1-202ENST00000380518 CEP85Q6P2H3 762 aa18.33■□□□□ 0.53
COL2A1-202ENST00000380518 LIG1P18858 919 aa18.33■□□□□ 0.52
COL2A1-202ENST00000380518 SMC5Q8IY18 1101 aa18.33■□□□□ 0.52
COL2A1-202ENST00000380518 CHMP4BP1P59074 171 aa18.33■□□□□ 0.52
COL2A1-202ENST00000380518 PSMA7O14818 248 aa18.32■□□□□ 0.52
COL2A1-202ENST00000380518 PAG1Q9NWQ8 432 aa18.32■□□□□ 0.52
COL2A1-202ENST00000380518 SAMM50Q9Y512 469 aa18.32■□□□□ 0.52
COL2A1-202ENST00000380518 NPHP3Q7Z494 1330 aa18.32■□□□□ 0.52
COL2A1-202ENST00000380518 RFC4P35249 363 aa18.32■□□□□ 0.52
COL2A1-202ENST00000380518 DNAJC25Q9H1X3 360 aa18.32■□□□□ 0.52
COL2A1-202ENST00000380518 ZNF219Q9P2Y4 722 aaPredicted RBP18.32■□□□□ 0.52
COL2A1-202ENST00000380518 THOC2Q8NI27 1593 aaKnown RBP18.32■□□□□ 0.52
COL2A1-202ENST00000380518 MAATS1Q7Z4T9 603 aa18.32■□□□□ 0.52
COL2A1-202ENST00000380518 SPTLC2O15270 562 aa18.32■□□□□ 0.52
COL2A1-202ENST00000380518 TUBB4AP04350 444 aa18.32■□□□□ 0.52
COL2A1-202ENST00000380518 AOPEPQ8N6M6 819 aa18.32■□□□□ 0.52
COL2A1-202ENST00000380518 ZBTB40Q9NUA8 1239 aa18.32■□□□□ 0.52
COL2A1-202ENST00000380518 TRIM75PA6NK02 468 aa18.31■□□□□ 0.52
COL2A1-202ENST00000380518 GIMAP7Q8NHV1 300 aa18.31■□□□□ 0.52
COL2A1-202ENST00000380518 MTHFSDQ2M296 383 aaKnown RBP18.31■□□□□ 0.52
COL2A1-202ENST00000380518 SLC4A8Q2Y0W8 1093 aa18.31■□□□□ 0.52
COL2A1-202ENST00000380518 NAA16Q6N069 864 aaPredicted RBP18.31■□□□□ 0.52
COL2A1-202ENST00000380518 CCDC174Q6PII3 467 aa18.31■□□□□ 0.52
COL2A1-202ENST00000380518 DNAI1Q9UI46 699 aa18.31■□□□□ 0.52
COL2A1-202ENST00000380518 ZKSCAN5Q9Y2L8 839 aa18.31■□□□□ 0.52
COL2A1-202ENST00000380518 MARCKSP29966 332 aaPredicted RBP18.31■□□□□ 0.52
COL2A1-202ENST00000380518 INTS4Q96HW7 963 aaKnown RBP18.31■□□□□ 0.52
COL2A1-202ENST00000380518 ZNF830Q96NB3 372 aaPredicted RBP18.31■□□□□ 0.52
COL2A1-202ENST00000380518 PA2G4Q9UQ80 394 aaKnown RBP18.31■□□□□ 0.52
COL2A1-202ENST00000380518 RLBP1P12271 317 aa18.31■□□□□ 0.52
COL2A1-202ENST00000380518 RAB3GAP1Q15042 981 aa18.31■□□□□ 0.52
COL2A1-202ENST00000380518 TRMT1LQ7Z2T5 733 aaKnown RBP18.31■□□□□ 0.52
COL2A1-202ENST00000380518 FLT4P35916 1363 aa18.3■□□□□ 0.52
COL2A1-202ENST00000380518 FSD2A1L4K1 749 aa18.3■□□□□ 0.52
COL2A1-202ENST00000380518 CTAGE15A4D2H0 777 aa18.3■□□□□ 0.52
COL2A1-202ENST00000380518 CTAGE8P0CG41 777 aa18.3■□□□□ 0.52
COL2A1-202ENST00000380518 CTAGE6Q86UF2 777 aa18.3■□□□□ 0.52
COL2A1-202ENST00000380518 CTAGE4Q8IX94 777 aa18.3■□□□□ 0.52
COL2A1-202ENST00000380518 PLVAPQ9BX97 442 aa18.3■□□□□ 0.52
COL2A1-202ENST00000380518 LMAN1P49257 510 aa18.29■□□□□ 0.52
COL2A1-202ENST00000380518 AK2P54819 239 aa18.29■□□□□ 0.52
COL2A1-202ENST00000380518 UBE4AQ14139 1066 aa18.29■□□□□ 0.52
COL2A1-202ENST00000380518 KIAA0753Q2KHM9 967 aa18.29■□□□□ 0.52
COL2A1-202ENST00000380518 FERMT2Q96AC1 680 aa18.29■□□□□ 0.52
COL2A1-202ENST00000380518 NLRP3Q96P20 1036 aa18.29■□□□□ 0.52
COL2A1-202ENST00000380518 ARFGAP3Q9NP61 516 aa18.29■□□□□ 0.52
COL2A1-202ENST00000380518 TYRO3Q06418 890 aa18.29■□□□□ 0.52
COL2A1-202ENST00000380518 CEP112Q8N8E3 955 aa18.29■□□□□ 0.52
COL2A1-202ENST00000380518 TSPYL6Q8N831 410 aa18.29■□□□□ 0.52
COL2A1-202ENST00000380518 BBXQ8WY36 941 aaPredicted RBP18.29■□□□□ 0.52
COL2A1-202ENST00000380518 IQSEC3Q9UPP2 1182 aaPredicted RBP18.29■□□□□ 0.52
COL2A1-202ENST00000380518 PTPRKQ15262 1439 aa18.29■□□□□ 0.52
COL2A1-202ENST00000380518 RTL1A6NKG5 1358 aa18.29■□□□□ 0.52
COL2A1-202ENST00000380518 CALM1P0DP23 149 aa18.29■□□□□ 0.52
COL2A1-202ENST00000380518 CALM2P0DP24 149 aa18.29■□□□□ 0.52
COL2A1-202ENST00000380518 CALM3P0DP25 149 aa18.29■□□□□ 0.52
COL2A1-202ENST00000380518 SPECC1LQ69YQ0 1117 aa18.29■□□□□ 0.52
COL2A1-202ENST00000380518 TNNQ9UQP3 1299 aa18.29■□□□□ 0.52
COL2A1-202ENST00000380518 RAD50Q92878 1312 aa18.29■□□□□ 0.52
COL2A1-202ENST00000380518 RNF113AO15541 343 aaKnown RBP18.28■□□□□ 0.52
COL2A1-202ENST00000380518 GNAT2P19087 354 aa18.28■□□□□ 0.52
COL2A1-202ENST00000380518 CALML3P27482 149 aa18.28■□□□□ 0.52
COL2A1-202ENST00000380518 ST5P78524 1137 aa18.28■□□□□ 0.52
COL2A1-202ENST00000380518 HSP90AA4PQ58FG1 418 aa18.28■□□□□ 0.52
COL2A1-202ENST00000380518 HEATR3Q7Z4Q2 680 aa18.28■□□□□ 0.52
COL2A1-202ENST00000380518 KRT222Q8N1A0 295 aa18.28■□□□□ 0.52
COL2A1-202ENST00000380518 DUOX2Q9NRD8 1548 aa18.28■□□□□ 0.52
COL2A1-202ENST00000380518 SOS1Q07889 1333 aaPredicted RBP18.28■□□□□ 0.52
COL2A1-202ENST00000380518 UHRF1BP1LA0JNW5 1464 aa18.28■□□□□ 0.52
COL2A1-202ENST00000380518 PRIM1P49642 420 aaKnown RBP18.28■□□□□ 0.52
COL2A1-202ENST00000380518 CREB3L3Q68CJ9 461 aa18.28■□□□□ 0.52
COL2A1-202ENST00000380518 USP37Q86T82 979 aa18.28■□□□□ 0.52
COL2A1-202ENST00000380518 PLEKHM2Q8IWE5 1019 aa18.28■□□□□ 0.52
COL2A1-202ENST00000380518 SYT1P21579 422 aa18.28■□□□□ 0.52
COL2A1-202ENST00000380518 TBC1D5Q92609 795 aa18.28■□□□□ 0.52
COL2A1-202ENST00000380518 SRRTQ9BXP5 876 aaKnown RBP18.28■□□□□ 0.52
COL2A1-202ENST00000380518 PIK3C2GO75747 1445 aa18.28■□□□□ 0.52
COL2A1-202ENST00000380518 STAMBPO95630 424 aa18.28■□□□□ 0.52
COL2A1-202ENST00000380518 ASIC1P78348 528 aa18.28■□□□□ 0.52
COL2A1-202ENST00000380518 TESK2Q96S53 571 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms