RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 WNK3Q9BYP7 1800 aa15.04■□□□□ -0
VPS16-202ENST00000380445 SYT1P21579 422 aa15.04■□□□□ -0
VPS16-202ENST00000380445 PUS3Q9BZE2 481 aaKnown RBP15.04■□□□□ -0
VPS16-202ENST00000380445 PRIM1P49642 420 aaKnown RBP15.03■□□□□ -0
VPS16-202ENST00000380445 PIP4K2BP78356 416 aa15.03■□□□□ -0
VPS16-202ENST00000380445 DDB1Q16531 1140 aa15.03■□□□□ -0
VPS16-202ENST00000380445 ME3Q16798 604 aa15.03■□□□□ -0
VPS16-202ENST00000380445 ZSCAN23Q3MJ62 389 aa15.03■□□□□ -0
VPS16-202ENST00000380445 GPT2Q8TD30 523 aa15.03■□□□□ -0
VPS16-202ENST00000380445 SLC4A9Q96Q91 983 aa15.03■□□□□ -0
VPS16-202ENST00000380445 CCDC9Q9Y3X0 531 aaKnown RBP15.03■□□□□ -0
VPS16-202ENST00000380445 GJB2P29033 226 aa15.03■□□□□ -0
VPS16-202ENST00000380445 HLFQ16534 295 aa15.03■□□□□ -0
VPS16-202ENST00000380445 NEK1Q96PY6 1258 aa15.03■□□□□ -0
VPS16-202ENST00000380445 DSCC1Q9BVC3 393 aa15.03■□□□□ -0
VPS16-202ENST00000380445 ZBTB1Q9Y2K1 713 aa15.03■□□□□ -0
VPS16-202ENST00000380445 SPATA31A1Q5TZJ5 1347 aa15.03■□□□□ -0
VPS16-202ENST00000380445 LARGE1O95461 756 aa15.02■□□□□ -0
VPS16-202ENST00000380445 TTC39AQ5SRH9 613 aa15.02■□□□□ -0
VPS16-202ENST00000380445 SYAP1Q96A49 352 aaPredicted RBP15.02■□□□□ -0
VPS16-202ENST00000380445 TPCN1Q9ULQ1 816 aa15.02■□□□□ -0
VPS16-202ENST00000380445 HMGB1P09429 215 aaKnown RBP15.02□□□□□ -0.01
VPS16-202ENST00000380445 ZMYM1Q5SVZ6 1142 aa15.02□□□□□ -0.01
VPS16-202ENST00000380445 ABCC12Q96J65 1359 aa15.02□□□□□ -0.01
VPS16-202ENST00000380445 ANKRD18BA2A2Z9 1011 aa15.02□□□□□ -0.01
VPS16-202ENST00000380445 RNF113AO15541 343 aaKnown RBP15.02□□□□□ -0.01
VPS16-202ENST00000380445 PDCP20941 246 aa15.02□□□□□ -0.01
VPS16-202ENST00000380445 GPTP24298 496 aa15.02□□□□□ -0.01
VPS16-202ENST00000380445 DZIP3Q86Y13 1208 aaKnown RBP15.02□□□□□ -0.01
VPS16-202ENST00000380445 ANP32BQ92688 251 aaKnown RBP15.02□□□□□ -0.01
VPS16-202ENST00000380445 SEC62Q99442 399 aaKnown RBP15.02□□□□□ -0.01
VPS16-202ENST00000380445 TRMT112Q9UI30 125 aaKnown RBP15.02□□□□□ -0.01
VPS16-202ENST00000380445 KAT6BQ8WYB5 2073 aa15.01□□□□□ -0.01
VPS16-202ENST00000380445 F13A1P00488 732 aa15.01□□□□□ -0.01
VPS16-202ENST00000380445 CTSWP56202 376 aa15.01□□□□□ -0.01
VPS16-202ENST00000380445 CSPP1Q1MSJ5 1256 aa15.01□□□□□ -0.01
VPS16-202ENST00000380445 TTLL11Q8NHH1 800 aa15.01□□□□□ -0.01
VPS16-202ENST00000380445 XAGE2Q96GT9 111 aa15.01□□□□□ -0.01
VPS16-202ENST00000380445 ANKRD36CQ5JPF3 1778 aa15.01□□□□□ -0.01
VPS16-202ENST00000380445 IRS4O14654 1257 aaPredicted RBP15.01□□□□□ -0.01
VPS16-202ENST00000380445 ADAMTS2O95450 1211 aa15.01□□□□□ -0.01
VPS16-202ENST00000380445 ZFYP08048 801 aaPredicted RBP15.01□□□□□ -0.01
VPS16-202ENST00000380445 FGD1P98174 961 aa15.01□□□□□ -0.01
VPS16-202ENST00000380445 LDHAL6AQ6ZMR3 332 aa15.01□□□□□ -0.01
VPS16-202ENST00000380445 CCDC129Q6ZRS4 1044 aa15.01□□□□□ -0.01
VPS16-202ENST00000380445 TMEM87AQ8NBN3 555 aa15.01□□□□□ -0.01
VPS16-202ENST00000380445 AK7Q96M32 723 aa15.01□□□□□ -0.01
VPS16-202ENST00000380445 PDE8AO60658 829 aa15□□□□□ -0.01
VPS16-202ENST00000380445 ITGA6P23229 1130 aa15□□□□□ -0.01
VPS16-202ENST00000380445 CYP21A2P08686 494 aa15□□□□□ -0.01
VPS16-202ENST00000380445 DOT1LQ8TEK3 1739 aa14.99□□□□□ -0.01
VPS16-202ENST00000380445 FKBP4Q02790 459 aaKnown RBP eCLIP14.99□□□□□ -0.01
VPS16-202ENST00000380445 TOB2Q14106 344 aaPredicted RBP14.99□□□□□ -0.01
VPS16-202ENST00000380445 METTL24Q5JXM2 366 aa14.99□□□□□ -0.01
VPS16-202ENST00000380445 CCDC85AQ96PX6 553 aaPredicted RBP14.99□□□□□ -0.01
VPS16-202ENST00000380445 RIPOR2Q9Y4F9 1068 aa14.99□□□□□ -0.01
VPS16-202ENST00000380445 PHLPP1O60346 1717 aa14.99□□□□□ -0.01
VPS16-202ENST00000380445 CHAMP1Q96JM3 812 aa14.99□□□□□ -0.01
VPS16-202ENST00000380445 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.99□□□□□ -0.01
VPS16-202ENST00000380445 NASPP49321 788 aaPredicted RBP14.98□□□□□ -0.01
VPS16-202ENST00000380445 ATP2B3Q16720 1220 aa14.98□□□□□ -0.01
VPS16-202ENST00000380445 USP48Q86UV5 1035 aa14.98□□□□□ -0.01
VPS16-202ENST00000380445 ZNF34Q8IZ26 560 aa14.98□□□□□ -0.01
VPS16-202ENST00000380445 NECAB1Q8N987 351 aa14.98□□□□□ -0.01
VPS16-202ENST00000380445 GREM2Q9H772 168 aa14.98□□□□□ -0.01
VPS16-202ENST00000380445 CNNM1Q9NRU3 951 aa14.98□□□□□ -0.01
VPS16-202ENST00000380445 TBC1D2BQ9UPU7 963 aa14.98□□□□□ -0.01
VPS16-202ENST00000380445 NRAPQ86VF7 1730 aa14.98□□□□□ -0.01
VPS16-202ENST00000380445 PHF14O94880 888 aa14.98□□□□□ -0.01
VPS16-202ENST00000380445 PDE4CQ08493 712 aa14.98□□□□□ -0.01
VPS16-202ENST00000380445 LARP1BQ659C4 914 aaKnown RBP14.98□□□□□ -0.01
VPS16-202ENST00000380445 CCDC87Q9NVE4 849 aa14.98□□□□□ -0.01
VPS16-202ENST00000380445 TAF6LQ9Y6J9 622 aa14.98□□□□□ -0.01
VPS16-202ENST00000380445 NUP98P52948 1817 aa14.98□□□□□ -0.01
VPS16-202ENST00000380445 HSP90B1P14625 803 aaKnown RBP14.97□□□□□ -0.01
VPS16-202ENST00000380445 CLCN1P35523 988 aa14.97□□□□□ -0.01
VPS16-202ENST00000380445 EIF5P55010 431 aaKnown RBP14.97□□□□□ -0.01
VPS16-202ENST00000380445 ST3GAL1Q11201 340 aa14.97□□□□□ -0.01
VPS16-202ENST00000380445 BARGINQ6ZT62 677 aa14.97□□□□□ -0.01
VPS16-202ENST00000380445 TMEM63CQ9P1W3 806 aa14.97□□□□□ -0.01
VPS16-202ENST00000380445 MTMR6Q9Y217 621 aa14.97□□□□□ -0.01
VPS16-202ENST00000380445 MYH3P11055 1940 aa14.97□□□□□ -0.01
VPS16-202ENST00000380445 CHGBP05060 677 aa14.97□□□□□ -0.01
VPS16-202ENST00000380445 HSPD1P10809 573 aaKnown RBP14.97□□□□□ -0.01
VPS16-202ENST00000380445 ATP6V1AP38606 617 aa14.97□□□□□ -0.01
VPS16-202ENST00000380445 FOXD4L6Q3SYB3 417 aaPredicted RBP14.97□□□□□ -0.01
VPS16-202ENST00000380445 LRSAM1Q6UWE0 723 aa14.97□□□□□ -0.01
VPS16-202ENST00000380445 FOXD4L3Q6VB84 417 aaPredicted RBP14.97□□□□□ -0.01
VPS16-202ENST00000380445 CTNNA3Q9UI47 895 aa14.97□□□□□ -0.01
VPS16-202ENST00000380445 SPATA31A5Q5VU36 1347 aa14.97□□□□□ -0.01
VPS16-202ENST00000380445 SPATA31A7Q8IWB4 1347 aa14.97□□□□□ -0.01
VPS16-202ENST00000380445 SYNE4Q8N205 404 aa14.96□□□□□ -0.01
VPS16-202ENST00000380445 ZNF512BQ96KM6 892 aaPredicted RBP14.96□□□□□ -0.01
VPS16-202ENST00000380445 TCEANC2Q96MN5 208 aa14.96□□□□□ -0.01
VPS16-202ENST00000380445 RBM27Q9P2N5 1060 aaKnown RBP14.96□□□□□ -0.01
VPS16-202ENST00000380445 MAST3O60307 1309 aa14.96□□□□□ -0.01
VPS16-202ENST00000380445 TCHHQ07283 1943 aa14.96□□□□□ -0.01
VPS16-202ENST00000380445 ADORA1P30542 326 aa14.96□□□□□ -0.01
VPS16-202ENST00000380445 DHX32Q7L7V1 743 aaKnown RBP14.96□□□□□ -0.01
VPS16-202ENST00000380445 CHMP4CQ96CF2 233 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms