RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 NAA15Q9BXJ9 866 aaKnown RBP16.08■□□□□ 0.16
TRIM13-202ENST00000378182 MAK16Q9BXY0 300 aaKnown RBP16.08■□□□□ 0.16
TRIM13-202ENST00000378182 IQCGQ9H095 443 aaKnown RBP16.08■□□□□ 0.16
TRIM13-202ENST00000378182 EHBP1L1Q8N3D4 1523 aa16.08■□□□□ 0.16
TRIM13-202ENST00000378182 GNPATO15228 680 aa16.08■□□□□ 0.16
TRIM13-202ENST00000378182 KRT5P13647 590 aa16.08■□□□□ 0.16
TRIM13-202ENST00000378182 CDK13Q14004 1512 aaKnown RBP16.08■□□□□ 0.16
TRIM13-202ENST00000378182 B4DLN1 442 aa16.07■□□□□ 0.16
TRIM13-202ENST00000378182 MRPL12P52815 198 aaKnown RBP16.07■□□□□ 0.16
TRIM13-202ENST00000378182 CADPS2Q86UW7 1296 aa16.07■□□□□ 0.16
TRIM13-202ENST00000378182 NACA2Q9H009 215 aa16.07■□□□□ 0.16
TRIM13-202ENST00000378182 GPR162Q16538 588 aa16.07■□□□□ 0.16
TRIM13-202ENST00000378182 RTN1Q16799 776 aa16.07■□□□□ 0.16
TRIM13-202ENST00000378182 MCM9Q9NXL9 1143 aa16.07■□□□□ 0.16
TRIM13-202ENST00000378182 KLF18A0A0U1RQI7 1052 aa16.07■□□□□ 0.16
TRIM13-202ENST00000378182 BMS1Q14692 1282 aaKnown RBP16.07■□□□□ 0.16
TRIM13-202ENST00000378182 KRT9P35527 623 aa16.07■□□□□ 0.16
TRIM13-202ENST00000378182 PPP2R5CQ13362 524 aa16.07■□□□□ 0.16
TRIM13-202ENST00000378182 MAEAQ7L5Y9 396 aa16.07■□□□□ 0.16
TRIM13-202ENST00000378182 CHMP2AO43633 222 aa16.07■□□□□ 0.16
TRIM13-202ENST00000378182 SLU7O95391 586 aaKnown RBP16.07■□□□□ 0.16
TRIM13-202ENST00000378182 XAGE3Q8WTP9 111 aa16.07■□□□□ 0.16
TRIM13-202ENST00000378182 CC2D2AQ9P2K1 1620 aa16.06■□□□□ 0.16
TRIM13-202ENST00000378182 TNNI2P48788 182 aa16.06■□□□□ 0.16
TRIM13-202ENST00000378182 NECAB1Q8N987 351 aa16.06■□□□□ 0.16
TRIM13-202ENST00000378182 RRP36Q96EU6 259 aaKnown RBP16.06■□□□□ 0.16
TRIM13-202ENST00000378182 SMIM23A6NLE4 172 aa16.06■□□□□ 0.16
TRIM13-202ENST00000378182 GBP3Q9H0R5 595 aa16.06■□□□□ 0.16
TRIM13-202ENST00000378182 TRIM6Q9C030 488 aaPredicted RBP16.06■□□□□ 0.16
TRIM13-202ENST00000378182 UQCRFS1P1P0C7P4 283 aa16.06■□□□□ 0.16
TRIM13-202ENST00000378182 MCM7P33993 719 aa16.06■□□□□ 0.16
TRIM13-202ENST00000378182 CFAP58Q5T655 872 aa16.06■□□□□ 0.16
TRIM13-202ENST00000378182 ZNF526Q8TF50 670 aaPredicted RBP16.06■□□□□ 0.16
TRIM13-202ENST00000378182 SH2B1Q9NRF2 756 aaPredicted RBP16.06■□□□□ 0.16
TRIM13-202ENST00000378182 LIMCH1Q9UPQ0 1083 aa16.06■□□□□ 0.16
TRIM13-202ENST00000378182 MCM5P33992 734 aa16.06■□□□□ 0.16
TRIM13-202ENST00000378182 TTC12Q9H892 705 aaPredicted RBP16.06■□□□□ 0.16
TRIM13-202ENST00000378182 DDX39AO00148 427 aaKnown RBP16.05■□□□□ 0.16
TRIM13-202ENST00000378182 RBM17Q96I25 401 aaKnown RBP16.05■□□□□ 0.16
TRIM13-202ENST00000378182 ALG1Q9BT22 464 aa16.05■□□□□ 0.16
TRIM13-202ENST00000378182 GPCPD1Q9NPB8 672 aa16.05■□□□□ 0.16
TRIM13-202ENST00000378182 C16orf45Q96MC5 204 aaPredicted RBP16.05■□□□□ 0.16
TRIM13-202ENST00000378182 KRT23Q9C075 422 aa16.05■□□□□ 0.16
TRIM13-202ENST00000378182 ZBTB43O43298 467 aa16.05■□□□□ 0.16
TRIM13-202ENST00000378182 HSPA2P54652 639 aa16.05■□□□□ 0.16
TRIM13-202ENST00000378182 ASIC1P78348 528 aa16.05■□□□□ 0.16
TRIM13-202ENST00000378182 LRRC27Q9C0I9 530 aa16.05■□□□□ 0.16
TRIM13-202ENST00000378182 MCM3P25205 808 aa16.05■□□□□ 0.16
TRIM13-202ENST00000378182 MARCKSP29966 332 aaPredicted RBP16.05■□□□□ 0.16
TRIM13-202ENST00000378182 CCDC24Q8N4L8 307 aa16.05■□□□□ 0.16
TRIM13-202ENST00000378182 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.05■□□□□ 0.16
TRIM13-202ENST00000378182 ACEP12821 1306 aa16.05■□□□□ 0.16
TRIM13-202ENST00000378182 SORBS3O60504 671 aa16.05■□□□□ 0.16
TRIM13-202ENST00000378182 USP37Q86T82 979 aa16.05■□□□□ 0.16
TRIM13-202ENST00000378182 ANO3Q9BYT9 981 aa16.04■□□□□ 0.16
TRIM13-202ENST00000378182 PRDM10Q9NQV6 1147 aa16.04■□□□□ 0.16
TRIM13-202ENST00000378182 LPXNO60711 386 aa16.04■□□□□ 0.16
TRIM13-202ENST00000378182 COPS6Q7L5N1 327 aa16.04■□□□□ 0.16
TRIM13-202ENST00000378182 KIF18AQ8NI77 898 aa16.04■□□□□ 0.16
TRIM13-202ENST00000378182 TRERF1Q96PN7 1200 aa16.04■□□□□ 0.16
TRIM13-202ENST00000378182 ZKSCAN3Q9BRR0 538 aa16.04■□□□□ 0.16
TRIM13-202ENST00000378182 SCAND2PQ9GZW5 306 aaPredicted RBP16.04■□□□□ 0.16
TRIM13-202ENST00000378182 STK32BQ9NY57 414 aa16.04■□□□□ 0.16
TRIM13-202ENST00000378182 NCKAP5LQ9HCH0 1330 aa16.04■□□□□ 0.16
TRIM13-202ENST00000378182 WDR7Q9Y4E6 1490 aa16.04■□□□□ 0.16
TRIM13-202ENST00000378182 CCDC172P0C7W6 258 aa16.04■□□□□ 0.16
TRIM13-202ENST00000378182 SPAG5Q96R06 1193 aa16.04■□□□□ 0.16
TRIM13-202ENST00000378182 N4BP3O15049 544 aa16.04■□□□□ 0.16
TRIM13-202ENST00000378182 MYCLP12524 364 aaPredicted RBP16.04■□□□□ 0.16
TRIM13-202ENST00000378182 GEN1Q17RS7 908 aa16.04■□□□□ 0.16
TRIM13-202ENST00000378182 TRAPPC3LQ5T215 181 aa16.04■□□□□ 0.16
TRIM13-202ENST00000378182 KIF14Q15058 1648 aa16.04■□□□□ 0.16
TRIM13-202ENST00000378182 FAM170AA1A519 330 aa16.04■□□□□ 0.16
TRIM13-202ENST00000378182 ESR2Q92731 530 aa16.04■□□□□ 0.16
TRIM13-202ENST00000378182 LRRC59Q96AG4 307 aaKnown RBP16.04■□□□□ 0.16
TRIM13-202ENST00000378182 RXRAP19793 462 aa16.03■□□□□ 0.16
TRIM13-202ENST00000378182 PPP2R5DQ14738 602 aa16.03■□□□□ 0.16
TRIM13-202ENST00000378182 CRCPO75575 148 aa16.03■□□□□ 0.16
TRIM13-202ENST00000378182 DCAF17Q5H9S7 520 aaPredicted RBP16.03■□□□□ 0.16
TRIM13-202ENST00000378182 TPTE2Q6XPS3 522 aa16.03■□□□□ 0.16
TRIM13-202ENST00000378182 CAMSAP2Q08AD1 1489 aa16.03■□□□□ 0.16
TRIM13-202ENST00000378182 SLC9C2Q5TAH2 1124 aa16.03■□□□□ 0.16
TRIM13-202ENST00000378182 TCEANC2Q96MN5 208 aa16.03■□□□□ 0.16
TRIM13-202ENST00000378182 STX1AQ16623 288 aa16.03■□□□□ 0.16
TRIM13-202ENST00000378182 MAP7D1Q3KQU3 841 aa16.03■□□□□ 0.16
TRIM13-202ENST00000378182 CCDC114Q96M63 670 aa16.03■□□□□ 0.16
TRIM13-202ENST00000378182 PTPDC1A2A3K4 754 aa16.03■□□□□ 0.16
TRIM13-202ENST00000378182 NOP56O00567 594 aaKnown RBP16.03■□□□□ 0.16
TRIM13-202ENST00000378182 NBPF7P0C2Y1 421 aaPredicted RBP16.03■□□□□ 0.16
TRIM13-202ENST00000378182 CEP83Q9Y592 693 aa16.03■□□□□ 0.16
TRIM13-202ENST00000378182 LDHBP07195 334 aaKnown RBP16.03■□□□□ 0.16
TRIM13-202ENST00000378182 IFI16Q16666 785 aaKnown RBP16.03■□□□□ 0.16
TRIM13-202ENST00000378182 PFDN4Q9NQP4 134 aa16.03■□□□□ 0.16
TRIM13-202ENST00000378182 SMC1BQ8NDV3 1235 aa16.02■□□□□ 0.16
TRIM13-202ENST00000378182 PDCL2Q8N4E4 241 aa16.02■□□□□ 0.16
TRIM13-202ENST00000378182 TXNDC16Q9P2K2 825 aa16.02■□□□□ 0.16
TRIM13-202ENST00000378182 ADGRL1O94910 1474 aa16.02■□□□□ 0.16
TRIM13-202ENST00000378182 GAS8O95995 478 aa16.02■□□□□ 0.15
TRIM13-202ENST00000378182 IRX5P78411 483 aaPredicted RBP16.02■□□□□ 0.15
TRIM13-202ENST00000378182 SPATA24Q86W54 205 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms