RNA–Protein interactions for RNA: ENST00000378115.2

ARHGEF35-201, Transcript of Rho guanine nucleotide exchange factor 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF35, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF35-201ENST00000378115 SEC31BQ9NQW1 1179 aa28.63■■■□□ 2.17
ARHGEF35-201ENST00000378115 ANKRD18BA2A2Z9 1011 aa28.63■■■□□ 2.17
ARHGEF35-201ENST00000378115 MCM2P49736 904 aa28.62■■■□□ 2.17
ARHGEF35-201ENST00000378115 VPS53Q5VIR6 699 aa28.62■■■□□ 2.17
ARHGEF35-201ENST00000378115 CNNM1Q9NRU3 951 aa28.62■■■□□ 2.17
ARHGEF35-201ENST00000378115 NIP7Q9Y221 180 aaKnown RBP eCLIP28.62■■■□□ 2.17
ARHGEF35-201ENST00000378115 A0A0G2JLW4 131 aa28.61■■■□□ 2.17
ARHGEF35-201ENST00000378115 BAG4O95429 457 aaKnown RBP28.61■■■□□ 2.17
ARHGEF35-201ENST00000378115 HSPA1LP34931 641 aa28.61■■■□□ 2.17
ARHGEF35-201ENST00000378115 GORABQ5T7V8 394 aa28.6■■■□□ 2.17
ARHGEF35-201ENST00000378115 CWC22Q9HCG8 908 aaKnown RBP28.6■■■□□ 2.17
ARHGEF35-201ENST00000378115 ZSWIM6Q9HCJ5 1215 aa28.6■■■□□ 2.17
ARHGEF35-201ENST00000378115 AMIGO3Q86WK7 504 aa28.59■■■□□ 2.17
ARHGEF35-201ENST00000378115 VGLL2Q8N8G2 317 aa28.59■■■□□ 2.17
ARHGEF35-201ENST00000378115 SMARCC1Q92922 1105 aaPredicted RBP28.59■■■□□ 2.17
ARHGEF35-201ENST00000378115 TTC39AQ5SRH9 613 aa28.59■■■□□ 2.17
ARHGEF35-201ENST00000378115 UTP14AQ9BVJ6 771 aaKnown RBP28.59■■■□□ 2.17
ARHGEF35-201ENST00000378115 SH3TC1Q8TE82 1336 aa28.59■■■□□ 2.17
ARHGEF35-201ENST00000378115 ATP2B3Q16720 1220 aa28.58■■■□□ 2.17
ARHGEF35-201ENST00000378115 MCMDC2Q4G0Z9 681 aa28.58■■■□□ 2.17
ARHGEF35-201ENST00000378115 PDRG1Q9NUG6 133 aa28.58■■■□□ 2.17
ARHGEF35-201ENST00000378115 ZAP70P43403 619 aa28.58■■■□□ 2.17
ARHGEF35-201ENST00000378115 GBP4Q96PP9 640 aa28.58■■■□□ 2.17
ARHGEF35-201ENST00000378115 NTSR2O95665 410 aa28.57■■■□□ 2.16
ARHGEF35-201ENST00000378115 RREB1Q92766 1687 aa28.57■■■□□ 2.16
ARHGEF35-201ENST00000378115 NUCB2P80303 420 aa28.57■■■□□ 2.16
ARHGEF35-201ENST00000378115 AKAP2Q9Y2D5 859 aa28.57■■■□□ 2.16
ARHGEF35-201ENST00000378115 MYH3P11055 1940 aa28.56■■■□□ 2.16
ARHGEF35-201ENST00000378115 ZKSCAN1P17029 563 aaPredicted RBP28.56■■■□□ 2.16
ARHGEF35-201ENST00000378115 CCDC158Q5M9N0 1113 aa28.56■■■□□ 2.16
ARHGEF35-201ENST00000378115 BICDL1Q6ZP65 573 aa28.56■■■□□ 2.16
ARHGEF35-201ENST00000378115 FBXO3Q9UK99 471 aa28.56■■■□□ 2.16
ARHGEF35-201ENST00000378115 COL4A1P02462 1669 aa28.56■■■□□ 2.16
ARHGEF35-201ENST00000378115 DDX11L8A8MPP1 907 aa28.55■■■□□ 2.16
ARHGEF35-201ENST00000378115 C3orf67Q6ZVT6 689 aa28.55■■■□□ 2.16
ARHGEF35-201ENST00000378115 CERKQ8TCT0 537 aa28.55■■■□□ 2.16
ARHGEF35-201ENST00000378115 CYP46A1Q9Y6A2 500 aa28.55■■■□□ 2.16
ARHGEF35-201ENST00000378115 RPAP1Q9BWH6 1393 aaPredicted RBP28.55■■■□□ 2.16
ARHGEF35-201ENST00000378115 M0R2C6 588 aa28.54■■■□□ 2.16
ARHGEF35-201ENST00000378115 ST3GAL1Q11201 340 aa28.54■■■□□ 2.16
ARHGEF35-201ENST00000378115 MEX3CQ5U5Q3 659 aaKnown RBP28.54■■■□□ 2.16
ARHGEF35-201ENST00000378115 MCTP1Q6DN14 999 aa28.54■■■□□ 2.16
ARHGEF35-201ENST00000378115 LIMCH1Q9UPQ0 1083 aa28.54■■■□□ 2.16
ARHGEF35-201ENST00000378115 COL5A3P25940 1745 aaPredicted RBP28.54■■■□□ 2.16
ARHGEF35-201ENST00000378115 MCAMP43121 646 aa28.54■■■□□ 2.16
ARHGEF35-201ENST00000378115 SPATA31A6Q5VVP1 1343 aa28.53■■■□□ 2.16
ARHGEF35-201ENST00000378115 SRP68Q9UHB9 627 aaKnown RBP28.53■■■□□ 2.16
ARHGEF35-201ENST00000378115 PDE8BO95263 885 aa28.53■■■□□ 2.16
ARHGEF35-201ENST00000378115 CYP21A2P08686 494 aa28.53■■■□□ 2.16
ARHGEF35-201ENST00000378115 ZMYM1Q5SVZ6 1142 aa28.53■■■□□ 2.16
ARHGEF35-201ENST00000378115 USPL1Q5W0Q7 1092 aa28.53■■■□□ 2.16
ARHGEF35-201ENST00000378115 OSBP2Q969R2 916 aa28.53■■■□□ 2.16
ARHGEF35-201ENST00000378115 TM6SF1Q9BZW5 370 aa28.53■■■□□ 2.16
ARHGEF35-201ENST00000378115 MAST3O60307 1309 aa28.52■■■□□ 2.16
ARHGEF35-201ENST00000378115 FOXD4L6Q3SYB3 417 aaPredicted RBP28.52■■■□□ 2.16
ARHGEF35-201ENST00000378115 FOXD4L3Q6VB84 417 aaPredicted RBP28.52■■■□□ 2.16
ARHGEF35-201ENST00000378115 NECAB1Q8N987 351 aa28.52■■■□□ 2.16
ARHGEF35-201ENST00000378115 INTS4Q96HW7 963 aaKnown RBP28.52■■■□□ 2.16
ARHGEF35-201ENST00000378115 CLEC17AQ6ZS10 378 aa28.52■■■□□ 2.16
ARHGEF35-201ENST00000378115 TPCN1Q9ULQ1 816 aa28.52■■■□□ 2.16
ARHGEF35-201ENST00000378115 PHKA1P46020 1223 aa28.51■■■□□ 2.15
ARHGEF35-201ENST00000378115 ME3Q16798 604 aa28.51■■■□□ 2.15
ARHGEF35-201ENST00000378115 CCDC83Q8IWF9 413 aa28.51■■■□□ 2.15
ARHGEF35-201ENST00000378115 GJD4Q96KN9 370 aaPredicted RBP28.51■■■□□ 2.15
ARHGEF35-201ENST00000378115 BCL2L12Q9HB09 334 aa28.51■■■□□ 2.15
ARHGEF35-201ENST00000378115 AFF2P51816 1311 aa28.51■■■□□ 2.15
ARHGEF35-201ENST00000378115 WTIPA6NIX2 430 aaPredicted RBP28.51■■■□□ 2.15
ARHGEF35-201ENST00000378115 RNF113AO15541 343 aaKnown RBP28.51■■■□□ 2.15
ARHGEF35-201ENST00000378115 RFX7Q2KHR2 1363 aa28.51■■■□□ 2.15
ARHGEF35-201ENST00000378115 ERFEQ4G0M1 354 aa28.5■■■□□ 2.15
ARHGEF35-201ENST00000378115 CCDC24Q8N4L8 307 aa28.5■■■□□ 2.15
ARHGEF35-201ENST00000378115 STOX1Q6ZVD7 989 aa28.5■■■□□ 2.15
ARHGEF35-201ENST00000378115 DDX60Q8IY21 1712 aaKnown RBP28.49■■■□□ 2.15
ARHGEF35-201ENST00000378115 PARP10Q53GL7 1025 aa28.49■■■□□ 2.15
ARHGEF35-201ENST00000378115 TBC1D9BQ66K14 1250 aa28.49■■■□□ 2.15
ARHGEF35-201ENST00000378115 TTLL5Q6EMB2 1281 aa28.48■■■□□ 2.15
ARHGEF35-201ENST00000378115 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.48■■■□□ 2.15
ARHGEF35-201ENST00000378115 CICQ96RK0 1608 aaPredicted RBP28.48■■■□□ 2.15
ARHGEF35-201ENST00000378115 BRD1O95696 1058 aa28.48■■■□□ 2.15
ARHGEF35-201ENST00000378115 THSD7AQ9UPZ6 1657 aa28.47■■■□□ 2.15
ARHGEF35-201ENST00000378115 FOXP2O15409 715 aa28.47■■■□□ 2.15
ARHGEF35-201ENST00000378115 TOB2Q14106 344 aaPredicted RBP28.47■■■□□ 2.15
ARHGEF35-201ENST00000378115 RNF20Q5VTR2 975 aa28.47■■■□□ 2.15
ARHGEF35-201ENST00000378115 BLOC1S2Q6QNY1 142 aa28.47■■■□□ 2.15
ARHGEF35-201ENST00000378115 HELLSQ9NRZ9 838 aa28.47■■■□□ 2.15
ARHGEF35-201ENST00000378115 BTAF1O14981 1849 aa28.47■■■□□ 2.15
ARHGEF35-201ENST00000378115 HSPD1P10809 573 aaKnown RBP28.47■■■□□ 2.15
ARHGEF35-201ENST00000378115 RPS6KB1P23443 525 aa28.47■■■□□ 2.15
ARHGEF35-201ENST00000378115 CCDC102BQ68D86 513 aa28.47■■■□□ 2.15
ARHGEF35-201ENST00000378115 LRRC2Q9BYS8 371 aa28.47■■■□□ 2.15
ARHGEF35-201ENST00000378115 PUS7LQ9H0K6 701 aaKnown RBP28.47■■■□□ 2.15
ARHGEF35-201ENST00000378115 GNPATO15228 680 aa28.45■■■□□ 2.15
ARHGEF35-201ENST00000378115 CCNL1Q9UK58 526 aaPredicted RBP28.45■■■□□ 2.15
ARHGEF35-201ENST00000378115 FGFR2P21802 821 aa28.45■■■□□ 2.14
ARHGEF35-201ENST00000378115 WASHC4Q2M389 1173 aa28.45■■■□□ 2.14
ARHGEF35-201ENST00000378115 MPHOSPH8Q99549 860 aa28.45■■■□□ 2.14
ARHGEF35-201ENST00000378115 PIH1D3Q9NQM4 214 aaKnown RBP28.45■■■□□ 2.14
ARHGEF35-201ENST00000378115 TSGA10IPQ3SY00 556 aa28.44■■■□□ 2.14
ARHGEF35-201ENST00000378115 U3KPZ7 1027 aaPredicted RBP28.44■■■□□ 2.14
ARHGEF35-201ENST00000378115 LMBRD1Q9NUN5 540 aa28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms