RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 PICALMQ13492 652 aa21.69■■□□□ 1.06
TBC1D4-201ENST00000377625 ACSBG1Q96GR2 724 aa21.69■■□□□ 1.06
TBC1D4-201ENST00000377625 TSNARE1Q96NA8 513 aa21.69■■□□□ 1.06
TBC1D4-201ENST00000377625 GRM8O00222 908 aa21.69■■□□□ 1.06
TBC1D4-201ENST00000377625 PDE1AP54750 535 aa21.69■■□□□ 1.06
TBC1D4-201ENST00000377625 SLC9C2Q5TAH2 1124 aa21.69■■□□□ 1.06
TBC1D4-201ENST00000377625 KRT13P13646 458 aa21.68■■□□□ 1.06
TBC1D4-201ENST00000377625 IL15P40933 162 aaPredicted RBP21.68■■□□□ 1.06
TBC1D4-201ENST00000377625 Q6ZUG5 572 aa21.68■■□□□ 1.06
TBC1D4-201ENST00000377625 PLVAPQ9BX97 442 aa21.68■■□□□ 1.06
TBC1D4-201ENST00000377625 ALDH1L1O75891 902 aa21.68■■□□□ 1.06
TBC1D4-201ENST00000377625 GIGYF2Q6Y7W6 1299 aaKnown RBP21.68■■□□□ 1.06
TBC1D4-201ENST00000377625 CEP63Q96MT8 703 aa21.68■■□□□ 1.06
TBC1D4-201ENST00000377625 CEP112Q8N8E3 955 aa21.68■■□□□ 1.06
TBC1D4-201ENST00000377625 BBXQ8WY36 941 aaPredicted RBP21.68■■□□□ 1.06
TBC1D4-201ENST00000377625 CNPY2Q9Y2B0 182 aa21.68■■□□□ 1.06
TBC1D4-201ENST00000377625 PABPN1LA6NDY0 278 aaKnown RBP21.67■■□□□ 1.06
TBC1D4-201ENST00000377625 PKNOX2Q96KN3 472 aa21.67■■□□□ 1.06
TBC1D4-201ENST00000377625 DENND4BO75064 1496 aaPredicted RBP21.67■■□□□ 1.06
TBC1D4-201ENST00000377625 CYLC1P35663 651 aaPredicted RBP21.67■■□□□ 1.06
TBC1D4-201ENST00000377625 NAPAP54920 295 aa21.67■■□□□ 1.06
TBC1D4-201ENST00000377625 MRPS27Q92552 414 aaKnown RBP21.67■■□□□ 1.06
TBC1D4-201ENST00000377625 ESYT1Q9BSJ8 1104 aa21.67■■□□□ 1.06
TBC1D4-201ENST00000377625 PHACTR2O75167 634 aa21.67■■□□□ 1.06
TBC1D4-201ENST00000377625 HSP90AA4PQ58FG1 418 aa21.67■■□□□ 1.06
TBC1D4-201ENST00000377625 SPECC1LQ69YQ0 1117 aa21.67■■□□□ 1.06
TBC1D4-201ENST00000377625 HMGXB3Q12766 1538 aa21.67■■□□□ 1.06
TBC1D4-201ENST00000377625 KSR2Q6VAB6 950 aa21.66■■□□□ 1.06
TBC1D4-201ENST00000377625 OGFOD1Q8N543 542 aa21.66■■□□□ 1.06
TBC1D4-201ENST00000377625 FAM107BQ9H098 131 aa21.66■■□□□ 1.06
TBC1D4-201ENST00000377625 ANO6Q4KMQ2 910 aa21.66■■□□□ 1.06
TBC1D4-201ENST00000377625 NIP7Q9Y221 180 aaKnown RBP eCLIP21.66■■□□□ 1.06
TBC1D4-201ENST00000377625 LRSAM1Q6UWE0 723 aa21.66■■□□□ 1.06
TBC1D4-201ENST00000377625 SMARCC2Q8TAQ2 1214 aa21.66■■□□□ 1.06
TBC1D4-201ENST00000377625 UTP14AQ9BVJ6 771 aaKnown RBP21.66■■□□□ 1.06
TBC1D4-201ENST00000377625 SPAG1Q07617 926 aa21.66■■□□□ 1.06
TBC1D4-201ENST00000377625 PPP1R14CQ8TAE6 165 aa21.65■■□□□ 1.06
TBC1D4-201ENST00000377625 PAXBP1Q9Y5B6 917 aa21.65■■□□□ 1.06
TBC1D4-201ENST00000377625 GTF2F1P35269 517 aaKnown RBP eCLIP21.65■■□□□ 1.062e-7■■■■■ 29.7
TBC1D4-201ENST00000377625 ASIC1P78348 528 aa21.65■■□□□ 1.06
TBC1D4-201ENST00000377625 FERP16591 822 aa21.65■■□□□ 1.06
TBC1D4-201ENST00000377625 MARCKSP29966 332 aaPredicted RBP21.65■■□□□ 1.06
TBC1D4-201ENST00000377625 ATP8B2P98198 1209 aa21.65■■□□□ 1.06
TBC1D4-201ENST00000377625 CKAP4Q07065 602 aaKnown RBP21.65■■□□□ 1.06
TBC1D4-201ENST00000377625 ZNF804AQ7Z570 1209 aa21.65■■□□□ 1.06
TBC1D4-201ENST00000377625 ANKRD44Q8N8A2 993 aa21.65■■□□□ 1.06
TBC1D4-201ENST00000377625 PSMA7O14818 248 aa21.65■■□□□ 1.06
TBC1D4-201ENST00000377625 HSF2BPO75031 334 aa21.64■■□□□ 1.06
TBC1D4-201ENST00000377625 MSH6P52701 1360 aa21.64■■□□□ 1.06
TBC1D4-201ENST00000377625 AKAP4Q5JQC9 854 aa21.64■■□□□ 1.05
TBC1D4-201ENST00000377625 PPM1EQ8WY54 764 aa21.64■■□□□ 1.05
TBC1D4-201ENST00000377625 CCDC171Q6TFL3 1326 aa21.64■■□□□ 1.05
TBC1D4-201ENST00000377625 MAGEB6P1A0A0J9YX57 407 aa21.64■■□□□ 1.05
TBC1D4-201ENST00000377625 GRIPAP1Q4V328 841 aa21.63■■□□□ 1.05
TBC1D4-201ENST00000377625 MAPK8IP2Q13387 824 aaPredicted RBP21.63■■□□□ 1.05
TBC1D4-201ENST00000377625 CCDC155Q8N6L0 562 aa21.63■■□□□ 1.05
TBC1D4-201ENST00000377625 RGS22Q8NE09 1264 aa21.63■■□□□ 1.05
TBC1D4-201ENST00000377625 DDX12PQ92771 950 aa21.63■■□□□ 1.05
TBC1D4-201ENST00000377625 PAG1Q9NWQ8 432 aa21.63■■□□□ 1.05
TBC1D4-201ENST00000377625 ABCA10Q8WWZ4 1543 aa21.63■■□□□ 1.05
TBC1D4-201ENST00000377625 RALGAPBQ86X10 1494 aa21.63■■□□□ 1.05
TBC1D4-201ENST00000377625 USP48Q86UV5 1035 aa21.63■■□□□ 1.05
TBC1D4-201ENST00000377625 RNF216Q9NWF9 866 aaPredicted RBP21.63■■□□□ 1.05
TBC1D4-201ENST00000377625 CALCOCO1Q9P1Z2 691 aa21.63■■□□□ 1.05
TBC1D4-201ENST00000377625 FANCAO15360 1455 aa21.62■■□□□ 1.05
TBC1D4-201ENST00000377625 BMS1Q14692 1282 aaKnown RBP21.62■■□□□ 1.05
TBC1D4-201ENST00000377625 C6orf50Q9HD87 102 aa21.62■■□□□ 1.05
TBC1D4-201ENST00000377625 MRVI1Q9Y6F6 885 aa21.62■■□□□ 1.05
TBC1D4-201ENST00000377625 CALM1P0DP23 149 aa21.62■■□□□ 1.05
TBC1D4-201ENST00000377625 CALM2P0DP24 149 aa21.62■■□□□ 1.05
TBC1D4-201ENST00000377625 CALM3P0DP25 149 aa21.62■■□□□ 1.05
TBC1D4-201ENST00000377625 NMIQ13287 307 aaPredicted RBP21.62■■□□□ 1.05
TBC1D4-201ENST00000377625 TNRQ92752 1358 aa21.62■■□□□ 1.05
TBC1D4-201ENST00000377625 A0A1W2PRG0 241 aa21.62■■□□□ 1.05
TBC1D4-201ENST00000377625 TICAM2Q86XR7 235 aa21.62■■□□□ 1.05
TBC1D4-201ENST00000377625 MRPL50Q8N5N7 158 aaKnown RBP21.61■■□□□ 1.05
TBC1D4-201ENST00000377625 C8orf58Q8NAV2 365 aa21.61■■□□□ 1.05
TBC1D4-201ENST00000377625 SSX2IPQ9Y2D8 614 aa21.61■■□□□ 1.05
TBC1D4-201ENST00000377625 SBNO2Q9Y2G9 1366 aa21.61■■□□□ 1.05
TBC1D4-201ENST00000377625 DHX58Q96C10 678 aa21.61■■□□□ 1.05
TBC1D4-201ENST00000377625 SKILP12757 684 aa21.61■■□□□ 1.05
TBC1D4-201ENST00000377625 TRIM75PA6NK02 468 aa21.61■■□□□ 1.05
TBC1D4-201ENST00000377625 SELENOOQ9BVL4 669 aa21.61■■□□□ 1.05
TBC1D4-201ENST00000377625 PA2G4Q9UQ80 394 aaKnown RBP21.61■■□□□ 1.05
TBC1D4-201ENST00000377625 RPRD2Q5VT52 1461 aaKnown RBP21.61■■□□□ 1.05
TBC1D4-201ENST00000377625 ZNF354CQ86Y25 554 aa21.61■■□□□ 1.05
TBC1D4-201ENST00000377625 DACT1Q9NYF0 836 aa21.61■■□□□ 1.05
TBC1D4-201ENST00000377625 AOPEPQ8N6M6 819 aa21.6■■□□□ 1.05
TBC1D4-201ENST00000377625 CTAGE15A4D2H0 777 aa21.6■■□□□ 1.05
TBC1D4-201ENST00000377625 CTAGE8P0CG41 777 aa21.6■■□□□ 1.05
TBC1D4-201ENST00000377625 CA8P35219 290 aa21.6■■□□□ 1.05
TBC1D4-201ENST00000377625 CTAGE6Q86UF2 777 aa21.6■■□□□ 1.05
TBC1D4-201ENST00000377625 CTAGE4Q8IX94 777 aa21.6■■□□□ 1.05
TBC1D4-201ENST00000377625 TCHPQ9BT92 498 aa21.6■■□□□ 1.05
TBC1D4-201ENST00000377625 PTGS1P23219 599 aa21.6■■□□□ 1.05
TBC1D4-201ENST00000377625 FAM200AQ8TCP9 573 aa21.6■■□□□ 1.05
TBC1D4-201ENST00000377625 NPHP3Q7Z494 1330 aa21.6■■□□□ 1.05
TBC1D4-201ENST00000377625 C6orf163Q5TEZ5 329 aa21.6■■□□□ 1.05
TBC1D4-201ENST00000377625 TRERF1Q96PN7 1200 aa21.6■■□□□ 1.05
TBC1D4-201ENST00000377625 IMPG2Q9BZV3 1241 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms